Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 RPS26P47-201ENST00000427219 348 ntBASIC4.21□□□□□ -1.74
APOEP02649 YY1P1-201ENST00000427625 668 ntBASIC4.21□□□□□ -1.74
APOEP02649 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.21□□□□□ -1.74
APOEP02649 AL358472.1-201ENST00000431295 329 ntBASIC4.21□□□□□ -1.74
APOEP02649 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.21□□□□□ -1.74
APOEP02649 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC4.21□□□□□ -1.74
APOEP02649 TPTE2P3-201ENST00000441562 1189 ntBASIC4.21□□□□□ -1.74
APOEP02649 HMGB1P16-201ENST00000447155 540 ntBASIC4.21□□□□□ -1.74
APOEP02649 AL162151.2-201ENST00000448875 158 ntBASIC4.21□□□□□ -1.74
APOEP02649 AC022431.1-201ENST00000450941 438 ntBASIC4.21□□□□□ -1.74
APOEP02649 AC037198.2-201ENST00000478845 733 ntBASIC4.21□□□□□ -1.74
APOEP02649 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.21□□□□□ -1.74
APOEP02649 IGKV2-38-201ENST00000517443 247 ntBASIC4.21□□□□□ -1.74
APOEP02649 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
APOEP02649 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.21□□□□□ -1.74
APOEP02649 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC4.21□□□□□ -1.74
APOEP02649 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.21□□□□□ -1.74
APOEP02649 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.21□□□□□ -1.74
APOEP02649 AC009101.1-201ENST00000568135 242 ntBASIC4.21□□□□□ -1.74
APOEP02649 MIR4644-201ENST00000579929 84 ntBASIC4.21□□□□□ -1.74
APOEP02649 VN1R79P-201ENST00000593540 513 ntBASIC4.21□□□□□ -1.74
APOEP02649 AC068020.1-201ENST00000594215 661 ntBASIC4.21□□□□□ -1.74
APOEP02649 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.21□□□□□ -1.74
APOEP02649 AC104662.1-201ENST00000604448 511 ntBASIC4.21□□□□□ -1.74
APOEP02649 AC068831.8-201ENST00000620171 435 ntBASIC4.21□□□□□ -1.74
APOEP02649 AC095038.2-201ENST00000621464 1070 ntBASIC4.21□□□□□ -1.74
APOEP02649 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.21□□□□□ -1.74
APOEP02649 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
APOEP02649 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.21□□□□□ -1.74
APOEP02649 AP001486.2-201ENST00000561652 5113 ntBASIC4.21□□□□□ -1.74
APOEP02649 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
APOEP02649 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.21□□□□□ -1.74
APOEP02649 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.21□□□□□ -1.74
APOEP02649 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
APOEP02649 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.21□□□□□ -1.74
APOEP02649 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.2□□□□□ -1.74
APOEP02649 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
APOEP02649 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.2□□□□□ -1.74
APOEP02649 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.2□□□□□ -1.74
APOEP02649 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
APOEP02649 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
APOEP02649 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
APOEP02649 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.2□□□□□ -1.74
APOEP02649 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.2□□□□□ -1.74
APOEP02649 AC093719.1-202ENST00000392735 373 ntBASIC4.2□□□□□ -1.74
APOEP02649 RNU4-6P-201ENST00000410804 122 ntBASIC4.2□□□□□ -1.74
APOEP02649 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
APOEP02649 AL691449.1-201ENST00000426570 421 ntBASIC4.2□□□□□ -1.74
APOEP02649 VDAC1P6-201ENST00000430062 855 ntBASIC4.2□□□□□ -1.74
APOEP02649 AL117339.2-201ENST00000430475 180 ntBASIC4.2□□□□□ -1.74
APOEP02649 AL035551.1-201ENST00000446931 348 ntBASIC4.2□□□□□ -1.74
APOEP02649 IFNWP4-201ENST00000453148 294 ntBASIC4.2□□□□□ -1.74
APOEP02649 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.2□□□□□ -1.74
APOEP02649 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.2□□□□□ -1.74
APOEP02649 RN7SKP21-201ENST00000516503 220 ntBASIC4.2□□□□□ -1.74
APOEP02649 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.2□□□□□ -1.74
APOEP02649 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.2□□□□□ -1.74
APOEP02649 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.2□□□□□ -1.74
APOEP02649 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC4.2□□□□□ -1.74
APOEP02649 MIR3160-1-201ENST00000577972 85 ntBASIC4.2□□□□□ -1.74
APOEP02649 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.2□□□□□ -1.74
APOEP02649 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC4.2□□□□□ -1.74
APOEP02649 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.2□□□□□ -1.74
APOEP02649 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.2□□□□□ -1.74
APOEP02649 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC4.2□□□□□ -1.74
APOEP02649 HSPD1P11-201ENST00000508643 1702 ntBASIC4.2□□□□□ -1.74
APOEP02649 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
APOEP02649 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
APOEP02649 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
APOEP02649 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
APOEP02649 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
APOEP02649 AC007529.1-201ENST00000418574 2178 ntBASIC4.19□□□□□ -1.74
APOEP02649 MIR372-201ENST00000362225 67 ntBASIC4.19□□□□□ -1.74
APOEP02649 MIR1251-201ENST00000408552 70 ntBASIC4.19□□□□□ -1.74
APOEP02649 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.19□□□□□ -1.74
APOEP02649 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.19□□□□□ -1.74
APOEP02649 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.19□□□□□ -1.74
APOEP02649 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.19□□□□□ -1.74
APOEP02649 AC092647.1-201ENST00000420654 287 ntBASIC4.19□□□□□ -1.74
APOEP02649 AC007064.3-201ENST00000422608 359 ntBASIC4.19□□□□□ -1.74
APOEP02649 MTCO1P54-201ENST00000430139 712 ntBASIC4.19□□□□□ -1.74
APOEP02649 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.19□□□□□ -1.74
APOEP02649 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.19□□□□□ -1.74
APOEP02649 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
APOEP02649 RPL21P133-201ENST00000443666 476 ntBASIC4.19□□□□□ -1.74
APOEP02649 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.19□□□□□ -1.74
APOEP02649 RN7SL271P-201ENST00000487601 295 ntBASIC4.19□□□□□ -1.74
APOEP02649 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.19□□□□□ -1.74
APOEP02649 AC108043.1-201ENST00000512696 574 ntBASIC4.19□□□□□ -1.74
APOEP02649 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.19□□□□□ -1.74
APOEP02649 OR8R1P-201ENST00000543943 764 ntBASIC4.19□□□□□ -1.74
APOEP02649 AC091515.1-201ENST00000548110 679 ntBASIC4.19□□□□□ -1.74
APOEP02649 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.19□□□□□ -1.74
APOEP02649 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC4.19□□□□□ -1.74
APOEP02649 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
APOEP02649 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.19□□□□□ -1.74
APOEP02649 AC079171.1-201ENST00000568788 914 ntBASIC4.19□□□□□ -1.74
APOEP02649 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.19□□□□□ -1.74
APOEP02649 AC110743.1-201ENST00000584870 478 ntBASIC4.19□□□□□ -1.74
APOEP02649 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms