Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC4.35□□□□□ -1.71
CTDNEP1O95476 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC4.35□□□□□ -1.71
CTDNEP1O95476 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.35□□□□□ -1.71
CTDNEP1O95476 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC4.35□□□□□ -1.71
CTDNEP1O95476 AC093853.1-201ENST00000515689 483 ntBASIC4.35□□□□□ -1.71
CTDNEP1O95476 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC4.35□□□□□ -1.71
CTDNEP1O95476 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.35□□□□□ -1.71
CTDNEP1O95476 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.35□□□□□ -1.71
CTDNEP1O95476 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.35□□□□□ -1.71
CTDNEP1O95476 AL158062.1-201ENST00000619632 745 ntBASIC4.35□□□□□ -1.71
CTDNEP1O95476 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.35□□□□□ -1.71
CTDNEP1O95476 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.35□□□□□ -1.71
CTDNEP1O95476 AC068724.3-201ENST00000625906 87 ntBASIC4.35□□□□□ -1.71
CTDNEP1O95476 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.35□□□□□ -1.71
CTDNEP1O95476 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.35□□□□□ -1.71
CTDNEP1O95476 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.35□□□□□ -1.71
CTDNEP1O95476 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.35□□□□□ -1.71
CTDNEP1O95476 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.34□□□□□ -1.71
CTDNEP1O95476 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
CTDNEP1O95476 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
CTDNEP1O95476 AL589994.1-201ENST00000404962 340 ntBASIC4.34□□□□□ -1.71
CTDNEP1O95476 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.34□□□□□ -1.71
CTDNEP1O95476 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.34□□□□□ -1.71
CTDNEP1O95476 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.34□□□□□ -1.71
CTDNEP1O95476 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC4.34□□□□□ -1.71
CTDNEP1O95476 RN7SKP209-201ENST00000516888 304 ntBASIC4.34□□□□□ -1.71
CTDNEP1O95476 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.34□□□□□ -1.71
CTDNEP1O95476 AC099489.2-201ENST00000574976 260 ntBASIC4.34□□□□□ -1.71
CTDNEP1O95476 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.34□□□□□ -1.71
CTDNEP1O95476 AC005255.1-201ENST00000593748 216 ntBASIC4.34□□□□□ -1.71
CTDNEP1O95476 AC087468.1-201ENST00000604365 630 ntBASIC4.34□□□□□ -1.71
CTDNEP1O95476 AL354760.1-201ENST00000608357 643 ntBASIC4.34□□□□□ -1.71
CTDNEP1O95476 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC4.34□□□□□ -1.71
CTDNEP1O95476 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.34□□□□□ -1.71
CTDNEP1O95476 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CTDNEP1O95476 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CTDNEP1O95476 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CTDNEP1O95476 AC024560.2-201ENST00000507981 1497 ntBASIC4.34□□□□□ -1.71
CTDNEP1O95476 CR381670.1-201ENST00000624291 1693 ntBASIC4.34□□□□□ -1.71
CTDNEP1O95476 AC107021.2-201ENST00000567714 2095 ntBASIC4.34□□□□□ -1.71
CTDNEP1O95476 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
CTDNEP1O95476 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
CTDNEP1O95476 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.34□□□□□ -1.72
CTDNEP1O95476 AC006504.1-201ENST00000562493 3666 ntBASIC4.34□□□□□ -1.72
CTDNEP1O95476 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.34□□□□□ -1.72
CTDNEP1O95476 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
CTDNEP1O95476 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.34□□□□□ -1.72
CTDNEP1O95476 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
CTDNEP1O95476 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.33□□□□□ -1.72
CTDNEP1O95476 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CTDNEP1O95476 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CTDNEP1O95476 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
CTDNEP1O95476 AC009229.4-201ENST00000623854 1947 ntBASIC4.33□□□□□ -1.72
CTDNEP1O95476 AC083899.2-201ENST00000423285 1376 ntBASIC4.33□□□□□ -1.72
CTDNEP1O95476 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.33□□□□□ -1.72
CTDNEP1O95476 RNA5SP424-201ENST00000390988 115 ntBASIC4.33□□□□□ -1.72
CTDNEP1O95476 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
CTDNEP1O95476 RN7SKP56-201ENST00000410513 331 ntBASIC4.33□□□□□ -1.72
CTDNEP1O95476 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.33□□□□□ -1.72
CTDNEP1O95476 RPS29P7-201ENST00000439662 171 ntBASIC4.33□□□□□ -1.72
CTDNEP1O95476 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC4.33□□□□□ -1.72
CTDNEP1O95476 AC006480.1-201ENST00000449887 378 ntBASIC4.33□□□□□ -1.72
CTDNEP1O95476 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC4.33□□□□□ -1.72
CTDNEP1O95476 AC005798.1-201ENST00000513715 387 ntBASIC4.33□□□□□ -1.72
CTDNEP1O95476 RN7SKP34-201ENST00000516142 244 ntBASIC4.33□□□□□ -1.72
CTDNEP1O95476 RN7SKP83-201ENST00000516512 178 ntBASIC4.33□□□□□ -1.72
CTDNEP1O95476 NARSP2-201ENST00000518524 679 ntBASIC4.33□□□□□ -1.72
CTDNEP1O95476 IGKV2D-10-201ENST00000520194 281 ntBASIC4.33□□□□□ -1.72
CTDNEP1O95476 AC008489.1-201ENST00000524271 483 ntBASIC4.33□□□□□ -1.72
CTDNEP1O95476 MTND2P17-201ENST00000550281 688 ntBASIC4.33□□□□□ -1.72
CTDNEP1O95476 AL121576.1-201ENST00000556055 276 ntBASIC4.33□□□□□ -1.72
CTDNEP1O95476 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC4.33□□□□□ -1.72
CTDNEP1O95476 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.33□□□□□ -1.72
CTDNEP1O95476 AC006960.3-201ENST00000561845 705 ntBASIC4.33□□□□□ -1.72
CTDNEP1O95476 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.33□□□□□ -1.72
CTDNEP1O95476 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.33□□□□□ -1.72
CTDNEP1O95476 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CTDNEP1O95476 AL159169.2-201ENST00000610061 1269 ntBASIC4.33□□□□□ -1.72
CTDNEP1O95476 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CTDNEP1O95476 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CTDNEP1O95476 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CTDNEP1O95476 AC009704.2-201ENST00000618739 483 ntBASIC4.33□□□□□ -1.72
CTDNEP1O95476 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CTDNEP1O95476 CDRT1-208ENST00000630868 794 ntBASIC4.33□□□□□ -1.72
CTDNEP1O95476 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CTDNEP1O95476 CASC19-284ENST00000642142 1868 ntBASIC4.32□□□□□ -1.72
CTDNEP1O95476 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.32□□□□□ -1.72
CTDNEP1O95476 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
CTDNEP1O95476 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
CTDNEP1O95476 RNU6-283P-201ENST00000364788 107 ntBASIC4.32□□□□□ -1.72
CTDNEP1O95476 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.32□□□□□ -1.72
CTDNEP1O95476 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.32□□□□□ -1.72
CTDNEP1O95476 U8.11-201ENST00000384699 133 ntBASIC4.32□□□□□ -1.72
CTDNEP1O95476 U8.12-201ENST00000384701 133 ntBASIC4.32□□□□□ -1.72
CTDNEP1O95476 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CTDNEP1O95476 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
CTDNEP1O95476 ZNF602P-201ENST00000405929 924 ntBASIC4.32□□□□□ -1.72
CTDNEP1O95476 RAB28P1-201ENST00000411517 641 ntBASIC4.32□□□□□ -1.72
CTDNEP1O95476 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC4.32□□□□□ -1.72
CTDNEP1O95476 AL390879.2-203ENST00000426943 1121 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms