Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SNX3O60493 ZNF137P-201ENST00000456718 1920 ntBASIC4.27□□□□□ -1.73
SNX3O60493 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
SNX3O60493 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.26□□□□□ -1.73
SNX3O60493 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
SNX3O60493 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.26□□□□□ -1.73
SNX3O60493 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SNX3O60493 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
SNX3O60493 AC073055.1-201ENST00000456901 1621 ntBASIC4.26□□□□□ -1.73
SNX3O60493 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
SNX3O60493 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SNX3O60493 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
SNX3O60493 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
SNX3O60493 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
SNX3O60493 MIR122-201ENST00000385044 85 ntBASIC4.26□□□□□ -1.73
SNX3O60493 MIR143-201ENST00000385300 106 ntBASIC4.26□□□□□ -1.73
SNX3O60493 AL603865.2-201ENST00000401679 213 ntBASIC4.26□□□□□ -1.73
SNX3O60493 RN7SKP56-201ENST00000410513 331 ntBASIC4.26□□□□□ -1.73
SNX3O60493 AC092638.1-201ENST00000411966 1275 ntBASIC4.26□□□□□ -1.73
SNX3O60493 CHEK2P3-201ENST00000416118 248 ntBASIC4.26□□□□□ -1.73
SNX3O60493 AC234782.4-201ENST00000417646 1048 ntBASIC4.26□□□□□ -1.73
SNX3O60493 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.26□□□□□ -1.73
SNX3O60493 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC4.26□□□□□ -1.73
SNX3O60493 USP12PY-201ENST00000427677 1064 ntBASIC4.26□□□□□ -1.73
SNX3O60493 AC009263.1-201ENST00000441193 1239 ntBASIC4.26□□□□□ -1.73
SNX3O60493 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC4.26□□□□□ -1.73
SNX3O60493 AC005002.1-201ENST00000447458 540 ntBASIC4.26□□□□□ -1.73
SNX3O60493 AC144530.1-201ENST00000452862 555 ntBASIC4.26□□□□□ -1.73
SNX3O60493 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.26□□□□□ -1.73
SNX3O60493 OR2AO1P-201ENST00000476497 403 ntBASIC4.26□□□□□ -1.73
SNX3O60493 RN7SL717P-201ENST00000478343 297 ntBASIC4.26□□□□□ -1.73
SNX3O60493 AC104982.1-201ENST00000478775 574 ntBASIC4.26□□□□□ -1.73
SNX3O60493 AC069499.1-201ENST00000489433 509 ntBASIC4.26□□□□□ -1.73
SNX3O60493 AC072052.1-201ENST00000496556 306 ntBASIC4.26□□□□□ -1.73
SNX3O60493 AC104164.2-201ENST00000496953 495 ntBASIC4.26□□□□□ -1.73
SNX3O60493 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.26□□□□□ -1.73
SNX3O60493 AL592156.1-201ENST00000508758 304 ntBASIC4.26□□□□□ -1.73
SNX3O60493 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
SNX3O60493 RNU2-30P-201ENST00000516209 141 ntBASIC4.26□□□□□ -1.73
SNX3O60493 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.26□□□□□ -1.73
SNX3O60493 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.26□□□□□ -1.73
SNX3O60493 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SNX3O60493 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.26□□□□□ -1.73
SNX3O60493 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC4.26□□□□□ -1.73
SNX3O60493 AC007599.1-201ENST00000568688 1174 ntBASIC4.26□□□□□ -1.73
SNX3O60493 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.26□□□□□ -1.73
SNX3O60493 EIF1P6-201ENST00000600054 334 ntBASIC4.26□□□□□ -1.73
SNX3O60493 RNU6-1192P-201ENST00000612197 107 ntBASIC4.26□□□□□ -1.73
SNX3O60493 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC4.26□□□□□ -1.73
SNX3O60493 RNU6-489P-201ENST00000618289 107 ntBASIC4.26□□□□□ -1.73
SNX3O60493 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC4.26□□□□□ -1.73
SNX3O60493 AC015908.5-201ENST00000623289 343 ntBASIC4.26□□□□□ -1.73
SNX3O60493 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.26□□□□□ -1.73
SNX3O60493 AL445984.1-201ENST00000637834 659 ntBASIC4.26□□□□□ -1.73
SNX3O60493 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SNX3O60493 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SNX3O60493 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SNX3O60493 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
SNX3O60493 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SNX3O60493 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SNX3O60493 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SNX3O60493 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.25□□□□□ -1.73
SNX3O60493 SNORA68.2-201ENST00000391263 128 ntBASIC4.25□□□□□ -1.73
SNX3O60493 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.25□□□□□ -1.73
SNX3O60493 AC114814.2-201ENST00000419195 485 ntBASIC4.25□□□□□ -1.73
SNX3O60493 HMGB1P45-201ENST00000435986 653 ntBASIC4.25□□□□□ -1.73
SNX3O60493 RPL23AP93-201ENST00000440847 484 ntBASIC4.25□□□□□ -1.73
SNX3O60493 AC114495.1-201ENST00000441274 436 ntBASIC4.25□□□□□ -1.73
SNX3O60493 AC092809.1-201ENST00000441469 474 ntBASIC4.25□□□□□ -1.73
SNX3O60493 SEPT14P24-201ENST00000447236 180 ntBASIC4.25□□□□□ -1.73
SNX3O60493 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.25□□□□□ -1.73
SNX3O60493 RPL37P3-201ENST00000456825 293 ntBASIC4.25□□□□□ -1.73
SNX3O60493 RPS27AP17-201ENST00000463344 455 ntBASIC4.25□□□□□ -1.73
SNX3O60493 UBA52P7-201ENST00000486088 380 ntBASIC4.25□□□□□ -1.73
SNX3O60493 MTND4LP2-201ENST00000502312 285 ntBASIC4.25□□□□□ -1.73
SNX3O60493 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC4.25□□□□□ -1.73
SNX3O60493 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.25□□□□□ -1.73
SNX3O60493 PRELID3BP4-201ENST00000515476 571 ntBASIC4.25□□□□□ -1.73
SNX3O60493 COX6B1P6-201ENST00000522347 255 ntBASIC4.25□□□□□ -1.73
SNX3O60493 AC010306.1-201ENST00000523223 1117 ntBASIC4.25□□□□□ -1.73
SNX3O60493 AC139103.1-201ENST00000534696 1030 ntBASIC4.25□□□□□ -1.73
SNX3O60493 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.25□□□□□ -1.73
SNX3O60493 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC4.25□□□□□ -1.73
SNX3O60493 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.25□□□□□ -1.73
SNX3O60493 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.25□□□□□ -1.73
SNX3O60493 AC090888.3-201ENST00000558917 509 ntBASIC4.25□□□□□ -1.73
SNX3O60493 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.25□□□□□ -1.73
SNX3O60493 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC4.25□□□□□ -1.73
SNX3O60493 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC4.25□□□□□ -1.73
SNX3O60493 AC073091.2-201ENST00000603205 907 ntBASIC4.25□□□□□ -1.73
SNX3O60493 AC025946.2-201ENST00000603398 234 ntBASIC4.25□□□□□ -1.73
SNX3O60493 BNIP3P4-201ENST00000604946 565 ntBASIC4.25□□□□□ -1.73
SNX3O60493 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.25□□□□□ -1.73
SNX3O60493 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC4.25□□□□□ -1.73
SNX3O60493 AC013468.1-201ENST00000608680 598 ntBASIC4.25□□□□□ -1.73
SNX3O60493 MIR486-1-201ENST00000612171 68 ntBASIC4.25□□□□□ -1.73
SNX3O60493 MIR7702-201ENST00000621931 59 ntBASIC4.25□□□□□ -1.73
SNX3O60493 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.25□□□□□ -1.73
SNX3O60493 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.25□□□□□ -1.73
SNX3O60493 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 133.5 ms