Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC6.52□□□□□ -1.37
GRIN3BO60391 AC007559.1-201ENST00000428736 355 ntBASIC6.52□□□□□ -1.37
GRIN3BO60391 RPL31P54-201ENST00000429803 370 ntBASIC6.52□□□□□ -1.37
GRIN3BO60391 RPS25P9-201ENST00000435591 252 ntBASIC6.52□□□□□ -1.37
GRIN3BO60391 AL034418.1-201ENST00000448675 860 ntBASIC6.52□□□□□ -1.37
GRIN3BO60391 SSXP1-201ENST00000453640 473 ntBASIC6.52□□□□□ -1.37
GRIN3BO60391 BNIP3P41-201ENST00000503774 571 ntBASIC6.52□□□□□ -1.37
GRIN3BO60391 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC6.52□□□□□ -1.37
GRIN3BO60391 FABP5P5-201ENST00000515537 406 ntBASIC6.52□□□□□ -1.37
GRIN3BO60391 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC6.52□□□□□ -1.37
GRIN3BO60391 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC6.52□□□□□ -1.37
GRIN3BO60391 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC6.52□□□□□ -1.37
GRIN3BO60391 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
GRIN3BO60391 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC6.52□□□□□ -1.37
GRIN3BO60391 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC6.52□□□□□ -1.37
GRIN3BO60391 GTF2IP8-201ENST00000560687 584 ntBASIC6.52□□□□□ -1.37
GRIN3BO60391 MTCO3P24-201ENST00000572729 782 ntBASIC6.52□□□□□ -1.37
GRIN3BO60391 SNORA59B-202ENST00000578183 701 ntBASIC6.52□□□□□ -1.37
GRIN3BO60391 AL606834.2-201ENST00000602954 668 ntBASIC6.52□□□□□ -1.37
GRIN3BO60391 AL627230.1-201ENST00000613077 211 ntBASIC6.52□□□□□ -1.37
GRIN3BO60391 AL591926.8-201ENST00000616876 211 ntBASIC6.52□□□□□ -1.37
GRIN3BO60391 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC6.52□□□□□ -1.37
GRIN3BO60391 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC6.52□□□□□ -1.37
GRIN3BO60391 AC073348.1-201ENST00000623002 331 ntBASIC6.52□□□□□ -1.37
GRIN3BO60391 AC025048.6-202ENST00000627667 438 ntBASIC6.52□□□□□ -1.37
GRIN3BO60391 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.52□□□□□ -1.37
GRIN3BO60391 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC6.52□□□□□ -1.37
GRIN3BO60391 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
GRIN3BO60391 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
GRIN3BO60391 AL078621.3-201ENST00000623707 2042 ntBASIC6.52□□□□□ -1.37
GRIN3BO60391 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
GRIN3BO60391 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC6.52□□□□□ -1.37
GRIN3BO60391 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
GRIN3BO60391 AC073365.1-203ENST00000641055 1992 ntBASIC6.51□□□□□ -1.37
GRIN3BO60391 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
GRIN3BO60391 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
GRIN3BO60391 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
GRIN3BO60391 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.51□□□□□ -1.37
GRIN3BO60391 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC6.51□□□□□ -1.37
GRIN3BO60391 RNA5SP428-201ENST00000365129 132 ntBASIC6.51□□□□□ -1.37
GRIN3BO60391 RNU1-64P-201ENST00000365443 163 ntBASIC6.51□□□□□ -1.37
GRIN3BO60391 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
GRIN3BO60391 AL359837.1-201ENST00000381357 287 ntBASIC6.51□□□□□ -1.37
GRIN3BO60391 AL034374.1-201ENST00000406329 351 ntBASIC6.51□□□□□ -1.37
GRIN3BO60391 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC6.51□□□□□ -1.37
GRIN3BO60391 RPL21P108-201ENST00000413857 481 ntBASIC6.51□□□□□ -1.37
GRIN3BO60391 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC6.51□□□□□ -1.37
GRIN3BO60391 Z93242.1-201ENST00000427102 353 ntBASIC6.51□□□□□ -1.37
GRIN3BO60391 AL451062.2-201ENST00000427515 271 ntBASIC6.51□□□□□ -1.37
GRIN3BO60391 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC6.51□□□□□ -1.37
GRIN3BO60391 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
GRIN3BO60391 HMGB3P10-201ENST00000434734 572 ntBASIC6.51□□□□□ -1.37
GRIN3BO60391 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC6.51□□□□□ -1.37
GRIN3BO60391 H3F3BP1-201ENST00000440551 403 ntBASIC6.51□□□□□ -1.37
GRIN3BO60391 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC6.51□□□□□ -1.37
GRIN3BO60391 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC6.51□□□□□ -1.37
GRIN3BO60391 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC6.51□□□□□ -1.37
GRIN3BO60391 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.51□□□□□ -1.37
GRIN3BO60391 AL445687.2-201ENST00000458156 728 ntBASIC6.51□□□□□ -1.37
GRIN3BO60391 AC010326.1-201ENST00000462726 602 ntBASIC6.51□□□□□ -1.37
GRIN3BO60391 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC6.51□□□□□ -1.37
GRIN3BO60391 IGKV2-23-201ENST00000518729 323 ntBASIC6.51□□□□□ -1.37
GRIN3BO60391 RGS5-219ENST00000528019 512 ntTSL 4 BASIC6.51□□□□□ -1.37
GRIN3BO60391 AHI1-217ENST00000534469 680 ntTSL 3 BASIC6.51□□□□□ -1.37
GRIN3BO60391 AC087883.1-201ENST00000551882 391 ntBASIC6.51□□□□□ -1.37
GRIN3BO60391 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC6.51□□□□□ -1.37
GRIN3BO60391 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC6.51□□□□□ -1.37
GRIN3BO60391 MIR4719-201ENST00000585233 84 ntBASIC6.51□□□□□ -1.37
GRIN3BO60391 AC091946.2-201ENST00000606105 291 ntBASIC6.51□□□□□ -1.37
GRIN3BO60391 AC080013.4-201ENST00000607624 649 ntBASIC6.51□□□□□ -1.37
GRIN3BO60391 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC6.51□□□□□ -1.37
GRIN3BO60391 AC095031.1-201ENST00000623685 672 ntBASIC6.51□□□□□ -1.37
GRIN3BO60391 AC099654.12-201ENST00000639868 649 ntBASIC6.51□□□□□ -1.37
GRIN3BO60391 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
GRIN3BO60391 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
GRIN3BO60391 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
GRIN3BO60391 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
GRIN3BO60391 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
GRIN3BO60391 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
GRIN3BO60391 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
GRIN3BO60391 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.51□□□□□ -1.37
GRIN3BO60391 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
GRIN3BO60391 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
GRIN3BO60391 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
GRIN3BO60391 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.5□□□□□ -1.37
GRIN3BO60391 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.5□□□□□ -1.37
GRIN3BO60391 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
GRIN3BO60391 AC093311.1-201ENST00000506586 2021 ntBASIC6.5□□□□□ -1.37
GRIN3BO60391 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
GRIN3BO60391 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
GRIN3BO60391 AC011447.7-201ENST00000624228 1590 ntBASIC6.5□□□□□ -1.37
GRIN3BO60391 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
GRIN3BO60391 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
GRIN3BO60391 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
GRIN3BO60391 RNU1-59P-201ENST00000364829 162 ntBASIC6.5□□□□□ -1.37
GRIN3BO60391 RNU6-1042P-201ENST00000384204 107 ntBASIC6.5□□□□□ -1.37
GRIN3BO60391 MIR320B1-201ENST00000390209 79 ntBASIC6.5□□□□□ -1.37
GRIN3BO60391 CYCSP45-201ENST00000402289 315 ntBASIC6.5□□□□□ -1.37
GRIN3BO60391 MTCO3P31-201ENST00000405526 789 ntBASIC6.5□□□□□ -1.37
GRIN3BO60391 MTND1P21-201ENST00000412991 285 ntBASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 136 ms