Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC3.04□□□□□ -1.92
SSSCA1O60232 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SSSCA1O60232 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.04□□□□□ -1.92
SSSCA1O60232 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SSSCA1O60232 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC3.04□□□□□ -1.92
SSSCA1O60232 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.04□□□□□ -1.92
SSSCA1O60232 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.04□□□□□ -1.92
SSSCA1O60232 Z97055.1-201ENST00000419730 712 ntBASIC3.04□□□□□ -1.92
SSSCA1O60232 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.04□□□□□ -1.92
SSSCA1O60232 AL590762.4-201ENST00000425885 253 ntBASIC3.04□□□□□ -1.92
SSSCA1O60232 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC3.04□□□□□ -1.92
SSSCA1O60232 TBCAP1-201ENST00000436520 327 ntBASIC3.04□□□□□ -1.92
SSSCA1O60232 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.04□□□□□ -1.92
SSSCA1O60232 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.04□□□□□ -1.92
SSSCA1O60232 RPS23P7-201ENST00000466210 444 ntBASIC3.04□□□□□ -1.92
SSSCA1O60232 RN7SL303P-201ENST00000469773 251 ntBASIC3.04□□□□□ -1.92
SSSCA1O60232 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC3.04□□□□□ -1.92
SSSCA1O60232 AC108941.1-201ENST00000502853 530 ntBASIC3.04□□□□□ -1.92
SSSCA1O60232 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC3.04□□□□□ -1.92
SSSCA1O60232 RN7SKP60-201ENST00000516985 239 ntBASIC3.04□□□□□ -1.92
SSSCA1O60232 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC3.04□□□□□ -1.92
SSSCA1O60232 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SSSCA1O60232 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.04□□□□□ -1.92
SSSCA1O60232 AC018552.3-201ENST00000567416 561 ntBASIC3.04□□□□□ -1.92
SSSCA1O60232 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC3.04□□□□□ -1.92
SSSCA1O60232 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC3.04□□□□□ -1.92
SSSCA1O60232 AC005191.1-201ENST00000603950 358 ntBASIC3.04□□□□□ -1.92
SSSCA1O60232 AL163642.2-201ENST00000604722 1019 ntBASIC3.04□□□□□ -1.92
SSSCA1O60232 AL365503.1-201ENST00000605247 905 ntBASIC3.04□□□□□ -1.92
SSSCA1O60232 CCT5-215ENST00000625723 135 ntTSL 5 BASIC3.04□□□□□ -1.92
SSSCA1O60232 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.04□□□□□ -1.92
SSSCA1O60232 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SSSCA1O60232 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
SSSCA1O60232 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SSSCA1O60232 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SSSCA1O60232 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
SSSCA1O60232 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
SSSCA1O60232 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
SSSCA1O60232 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
SSSCA1O60232 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.03□□□□□ -1.92
SSSCA1O60232 RNA5SP505-201ENST00000364748 108 ntBASIC3.03□□□□□ -1.92
SSSCA1O60232 RNA5SP235-201ENST00000365411 114 ntBASIC3.03□□□□□ -1.92
SSSCA1O60232 MIR550A3-201ENST00000390735 95 ntBASIC3.03□□□□□ -1.92
SSSCA1O60232 RPS26P8-201ENST00000393490 348 ntBASIC3.03□□□□□ -1.92
SSSCA1O60232 HYKK-202ENST00000408962 847 ntTSL 5 BASIC3.03□□□□□ -1.92
SSSCA1O60232 RN7SKP33-201ENST00000410942 340 ntBASIC3.03□□□□□ -1.92
SSSCA1O60232 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC3.03□□□□□ -1.92
SSSCA1O60232 TCEA1P2-201ENST00000420496 906 ntBASIC3.03□□□□□ -1.92
SSSCA1O60232 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.03□□□□□ -1.92
SSSCA1O60232 AC006989.1-201ENST00000427212 131 ntBASIC3.03□□□□□ -1.92
SSSCA1O60232 HSPE1P27-201ENST00000430808 296 ntBASIC3.03□□□□□ -1.92
SSSCA1O60232 NDUFB1P1-201ENST00000435191 180 ntBASIC3.03□□□□□ -1.92
SSSCA1O60232 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC3.03□□□□□ -1.92
SSSCA1O60232 SNORA71B-202ENST00000439232 272 ntBASIC3.03□□□□□ -1.92
SSSCA1O60232 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.03□□□□□ -1.92
SSSCA1O60232 MRPS31P2-201ENST00000451581 518 ntBASIC3.03□□□□□ -1.92
SSSCA1O60232 AC016724.1-201ENST00000453215 421 ntBASIC3.03□□□□□ -1.92
SSSCA1O60232 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC3.03□□□□□ -1.92
SSSCA1O60232 AC099563.1-201ENST00000456086 418 ntBASIC3.03□□□□□ -1.92
SSSCA1O60232 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.03□□□□□ -1.92
SSSCA1O60232 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.03□□□□□ -1.92
SSSCA1O60232 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC3.03□□□□□ -1.92
SSSCA1O60232 PCBP2P3-201ENST00000509726 843 ntBASIC3.03□□□□□ -1.92
SSSCA1O60232 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC3.03□□□□□ -1.92
SSSCA1O60232 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC3.03□□□□□ -1.92
SSSCA1O60232 NDUFB9P3-201ENST00000521269 501 ntBASIC3.03□□□□□ -1.92
SSSCA1O60232 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.03□□□□□ -1.92
SSSCA1O60232 AL139174.1-201ENST00000531489 886 ntBASIC3.03□□□□□ -1.92
SSSCA1O60232 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.03□□□□□ -1.92
SSSCA1O60232 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.03□□□□□ -1.92
SSSCA1O60232 YPEL5P3-201ENST00000547227 352 ntBASIC3.03□□□□□ -1.92
SSSCA1O60232 HYKK-203ENST00000563233 734 ntTSL 2 BASIC3.03□□□□□ -1.92
SSSCA1O60232 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.03□□□□□ -1.92
SSSCA1O60232 IPO5P1-202ENST00000600039 287 ntBASIC3.03□□□□□ -1.92
SSSCA1O60232 MIR8059-201ENST00000620427 81 ntBASIC3.03□□□□□ -1.92
SSSCA1O60232 AC105105.5-201ENST00000622635 1294 ntBASIC3.03□□□□□ -1.92
SSSCA1O60232 AC011944.2-201ENST00000624440 683 ntBASIC3.03□□□□□ -1.92
SSSCA1O60232 AP000843.1-201ENST00000624880 701 ntBASIC3.03□□□□□ -1.92
SSSCA1O60232 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
SSSCA1O60232 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.03□□□□□ -1.92
SSSCA1O60232 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SSSCA1O60232 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.03□□□□□ -1.93
SSSCA1O60232 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.02□□□□□ -1.93
SSSCA1O60232 SPATA2P1-201ENST00000431223 2055 ntBASIC3.02□□□□□ -1.93
SSSCA1O60232 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
SSSCA1O60232 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.02□□□□□ -1.93
SSSCA1O60232 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.02□□□□□ -1.93
SSSCA1O60232 RN7SKP103-201ENST00000363848 320 ntBASIC3.02□□□□□ -1.93
SSSCA1O60232 RNA5SP97-201ENST00000365006 84 ntBASIC3.02□□□□□ -1.93
SSSCA1O60232 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
SSSCA1O60232 RNU4-6P-201ENST00000410804 122 ntBASIC3.02□□□□□ -1.93
SSSCA1O60232 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.02□□□□□ -1.93
SSSCA1O60232 AL158071.1-201ENST00000430315 461 ntBASIC3.02□□□□□ -1.93
SSSCA1O60232 Z74696.2-201ENST00000436514 498 ntBASIC3.02□□□□□ -1.93
SSSCA1O60232 USP9YP7-201ENST00000436723 430 ntBASIC3.02□□□□□ -1.93
SSSCA1O60232 AC006466.1-201ENST00000438721 289 ntBASIC3.02□□□□□ -1.93
SSSCA1O60232 ATP6V0E1P2-201ENST00000441771 245 ntBASIC3.02□□□□□ -1.93
SSSCA1O60232 TXNP1-201ENST00000441872 371 ntBASIC3.02□□□□□ -1.93
SSSCA1O60232 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC3.02□□□□□ -1.93
SSSCA1O60232 USP9YP32-201ENST00000452432 430 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms