Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
NEDD8-MDP1E9PL57 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC4.32□□□□□ -1.72
NEDD8-MDP1E9PL57 AC025750.1-201ENST00000399891 379 ntBASIC4.32□□□□□ -1.72
NEDD8-MDP1E9PL57 PPIAP31-201ENST00000405422 495 ntBASIC4.32□□□□□ -1.72
NEDD8-MDP1E9PL57 RPL21P65-201ENST00000406094 466 ntBASIC4.32□□□□□ -1.72
NEDD8-MDP1E9PL57 PTGES3P2-201ENST00000407942 482 ntBASIC4.32□□□□□ -1.72
NEDD8-MDP1E9PL57 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC4.32□□□□□ -1.72
NEDD8-MDP1E9PL57 AC122718.1-201ENST00000439448 744 ntBASIC4.32□□□□□ -1.72
NEDD8-MDP1E9PL57 AC023512.1-201ENST00000444513 499 ntBASIC4.32□□□□□ -1.72
NEDD8-MDP1E9PL57 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC4.32□□□□□ -1.72
NEDD8-MDP1E9PL57 AL035551.1-201ENST00000446931 348 ntBASIC4.32□□□□□ -1.72
NEDD8-MDP1E9PL57 PTMAP3-201ENST00000447474 330 ntBASIC4.32□□□□□ -1.72
NEDD8-MDP1E9PL57 NPM1P39-201ENST00000449818 867 ntBASIC4.32□□□□□ -1.72
NEDD8-MDP1E9PL57 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC4.32□□□□□ -1.72
NEDD8-MDP1E9PL57 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.32□□□□□ -1.72
NEDD8-MDP1E9PL57 FAM133DP-201ENST00000464802 691 ntBASIC4.32□□□□□ -1.72
NEDD8-MDP1E9PL57 UBA52P3-201ENST00000491303 382 ntBASIC4.32□□□□□ -1.72
NEDD8-MDP1E9PL57 RPL23AP73-201ENST00000492507 471 ntBASIC4.32□□□□□ -1.72
NEDD8-MDP1E9PL57 RN7SL604P-201ENST00000492589 296 ntBASIC4.32□□□□□ -1.72
NEDD8-MDP1E9PL57 PGBD4P4-201ENST00000509673 613 ntBASIC4.32□□□□□ -1.72
NEDD8-MDP1E9PL57 HMGB3P13-201ENST00000511263 607 ntBASIC4.32□□□□□ -1.72
NEDD8-MDP1E9PL57 SNORA76.2-201ENST00000517095 137 ntBASIC4.32□□□□□ -1.72
NEDD8-MDP1E9PL57 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.32□□□□□ -1.72
NEDD8-MDP1E9PL57 HIGD1AP18-201ENST00000520730 278 ntBASIC4.32□□□□□ -1.72
NEDD8-MDP1E9PL57 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.32□□□□□ -1.72
NEDD8-MDP1E9PL57 OR4R2P-201ENST00000530815 597 ntBASIC4.32□□□□□ -1.72
NEDD8-MDP1E9PL57 NPM1P35-201ENST00000533043 868 ntBASIC4.32□□□□□ -1.72
NEDD8-MDP1E9PL57 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
NEDD8-MDP1E9PL57 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.32□□□□□ -1.72
NEDD8-MDP1E9PL57 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC4.32□□□□□ -1.72
NEDD8-MDP1E9PL57 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.32□□□□□ -1.72
NEDD8-MDP1E9PL57 AC022655.2-201ENST00000577280 318 ntBASIC4.32□□□□□ -1.72
NEDD8-MDP1E9PL57 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.32□□□□□ -1.72
NEDD8-MDP1E9PL57 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.32□□□□□ -1.72
NEDD8-MDP1E9PL57 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.32□□□□□ -1.72
NEDD8-MDP1E9PL57 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
NEDD8-MDP1E9PL57 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.32□□□□□ -1.72
NEDD8-MDP1E9PL57 Z82217.1-201ENST00000625157 8149 ntBASIC4.32□□□□□ -1.72
NEDD8-MDP1E9PL57 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.32□□□□□ -1.72
NEDD8-MDP1E9PL57 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
NEDD8-MDP1E9PL57 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.32□□□□□ -1.72
NEDD8-MDP1E9PL57 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
NEDD8-MDP1E9PL57 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
NEDD8-MDP1E9PL57 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NEDD8-MDP1E9PL57 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NEDD8-MDP1E9PL57 AL121834.1-202ENST00000404494 277 ntBASIC4.31□□□□□ -1.72
NEDD8-MDP1E9PL57 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.31□□□□□ -1.72
NEDD8-MDP1E9PL57 AL161631.1-201ENST00000417933 486 ntBASIC4.31□□□□□ -1.72
NEDD8-MDP1E9PL57 OR51A6P-201ENST00000418680 1004 ntBASIC4.31□□□□□ -1.72
NEDD8-MDP1E9PL57 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC4.31□□□□□ -1.72
NEDD8-MDP1E9PL57 BX119904.1-201ENST00000432026 348 ntBASIC4.31□□□□□ -1.72
NEDD8-MDP1E9PL57 CACYBPP1-201ENST00000438592 684 ntBASIC4.31□□□□□ -1.72
NEDD8-MDP1E9PL57 AL133244.1-201ENST00000456007 258 ntBASIC4.31□□□□□ -1.72
NEDD8-MDP1E9PL57 AC005008.1-201ENST00000456151 612 ntBASIC4.31□□□□□ -1.72
NEDD8-MDP1E9PL57 RN7SL817P-201ENST00000480777 288 ntBASIC4.31□□□□□ -1.72
NEDD8-MDP1E9PL57 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC4.31□□□□□ -1.72
NEDD8-MDP1E9PL57 AC104164.2-201ENST00000496953 495 ntBASIC4.31□□□□□ -1.72
NEDD8-MDP1E9PL57 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC4.31□□□□□ -1.72
NEDD8-MDP1E9PL57 STMN1P2-201ENST00000508435 439 ntBASIC4.31□□□□□ -1.72
NEDD8-MDP1E9PL57 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.31□□□□□ -1.72
NEDD8-MDP1E9PL57 AC090151.1-201ENST00000520784 730 ntBASIC4.31□□□□□ -1.72
NEDD8-MDP1E9PL57 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.31□□□□□ -1.72
NEDD8-MDP1E9PL57 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.31□□□□□ -1.72
NEDD8-MDP1E9PL57 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.31□□□□□ -1.72
NEDD8-MDP1E9PL57 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
NEDD8-MDP1E9PL57 RPL21P7-201ENST00000557463 483 ntBASIC4.31□□□□□ -1.72
NEDD8-MDP1E9PL57 CD24P2-201ENST00000565486 219 ntBASIC4.31□□□□□ -1.72
NEDD8-MDP1E9PL57 AC090079.2-201ENST00000575289 768 ntBASIC4.31□□□□□ -1.72
NEDD8-MDP1E9PL57 MIR1254-2-201ENST00000579553 63 ntBASIC4.31□□□□□ -1.72
NEDD8-MDP1E9PL57 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.31□□□□□ -1.72
NEDD8-MDP1E9PL57 CBX3P2-202ENST00000583365 535 ntBASIC4.31□□□□□ -1.72
NEDD8-MDP1E9PL57 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC4.31□□□□□ -1.72
NEDD8-MDP1E9PL57 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC4.31□□□□□ -1.72
NEDD8-MDP1E9PL57 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC4.31□□□□□ -1.72
NEDD8-MDP1E9PL57 AC005776.1-201ENST00000603164 290 ntBASIC4.31□□□□□ -1.72
NEDD8-MDP1E9PL57 AL158211.2-201ENST00000607282 395 ntBASIC4.31□□□□□ -1.72
NEDD8-MDP1E9PL57 AL353726.1-201ENST00000614041 1000 ntBASIC4.31□□□□□ -1.72
NEDD8-MDP1E9PL57 AL138721.1-201ENST00000616756 179 ntBASIC4.31□□□□□ -1.72
NEDD8-MDP1E9PL57 AC140113.4-201ENST00000622087 222 ntBASIC4.31□□□□□ -1.72
NEDD8-MDP1E9PL57 AC097460.3-201ENST00000623099 442 ntBASIC4.31□□□□□ -1.72
NEDD8-MDP1E9PL57 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.31□□□□□ -1.72
NEDD8-MDP1E9PL57 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.31□□□□□ -1.72
NEDD8-MDP1E9PL57 AC092435.4-201ENST00000623012 4159 ntBASIC4.31□□□□□ -1.72
NEDD8-MDP1E9PL57 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.31□□□□□ -1.72
NEDD8-MDP1E9PL57 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
NEDD8-MDP1E9PL57 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
NEDD8-MDP1E9PL57 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
NEDD8-MDP1E9PL57 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
NEDD8-MDP1E9PL57 OR11H4-201ENST00000315409 1082 ntBASIC4.3□□□□□ -1.72
NEDD8-MDP1E9PL57 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
NEDD8-MDP1E9PL57 RNU6-792P-201ENST00000363490 107 ntBASIC4.3□□□□□ -1.72
NEDD8-MDP1E9PL57 RNA5SP513-201ENST00000364648 118 ntBASIC4.3□□□□□ -1.72
NEDD8-MDP1E9PL57 RNA5SP22-201ENST00000365393 109 ntBASIC4.3□□□□□ -1.72
NEDD8-MDP1E9PL57 AC019155.1-201ENST00000382242 574 ntBASIC4.3□□□□□ -1.72
NEDD8-MDP1E9PL57 RNU6-532P-201ENST00000384318 107 ntBASIC4.3□□□□□ -1.72
NEDD8-MDP1E9PL57 ENSAP1-201ENST00000392855 326 ntBASIC4.3□□□□□ -1.72
NEDD8-MDP1E9PL57 TAF9BP2-201ENST00000400856 499 ntBASIC4.3□□□□□ -1.72
NEDD8-MDP1E9PL57 RNU4-74P-201ENST00000411280 161 ntBASIC4.3□□□□□ -1.72
NEDD8-MDP1E9PL57 OR6K4P-201ENST00000423179 955 ntBASIC4.3□□□□□ -1.72
NEDD8-MDP1E9PL57 AL158073.1-201ENST00000426848 1104 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms