Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
CCDC66A2RUB6 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC66A2RUB6 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC66A2RUB6 RNU6-1066P-201ENST00000363573 105 ntBASIC5.81□□□□□ -1.48
CCDC66A2RUB6 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC66A2RUB6 OR1L6-202ENST00000373684 1044 ntBASIC5.81□□□□□ -1.48
CCDC66A2RUB6 SNORA51.12-201ENST00000384448 134 ntBASIC5.81□□□□□ -1.48
CCDC66A2RUB6 PPIAP9-201ENST00000403866 498 ntBASIC5.81□□□□□ -1.48
CCDC66A2RUB6 RPL23AP47-201ENST00000408017 460 ntBASIC5.81□□□□□ -1.48
CCDC66A2RUB6 HMGN1P20-201ENST00000411849 300 ntBASIC5.81□□□□□ -1.48
CCDC66A2RUB6 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC5.81□□□□□ -1.48
CCDC66A2RUB6 RPL23AP39-201ENST00000415533 405 ntBASIC5.81□□□□□ -1.48
CCDC66A2RUB6 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC5.81□□□□□ -1.48
CCDC66A2RUB6 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.81□□□□□ -1.48
CCDC66A2RUB6 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC5.81□□□□□ -1.48
CCDC66A2RUB6 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.81□□□□□ -1.48
CCDC66A2RUB6 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.81□□□□□ -1.48
CCDC66A2RUB6 SKP1P3-201ENST00000429280 487 ntBASIC5.81□□□□□ -1.48
CCDC66A2RUB6 RPL7AP49-201ENST00000429522 581 ntBASIC5.81□□□□□ -1.48
CCDC66A2RUB6 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC5.81□□□□□ -1.48
CCDC66A2RUB6 AL591438.1-201ENST00000433508 581 ntBASIC5.81□□□□□ -1.48
CCDC66A2RUB6 AC006335.2-201ENST00000437993 330 ntBASIC5.81□□□□□ -1.48
CCDC66A2RUB6 AL450263.2-201ENST00000439400 589 ntBASIC5.81□□□□□ -1.48
CCDC66A2RUB6 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC5.81□□□□□ -1.48
CCDC66A2RUB6 RPL36AP33-201ENST00000450395 310 ntBASIC5.81□□□□□ -1.48
CCDC66A2RUB6 MTCYBP1-201ENST00000454315 1119 ntBASIC5.81□□□□□ -1.48
CCDC66A2RUB6 NDUFAF4P4-201ENST00000454883 502 ntBASIC5.81□□□□□ -1.48
CCDC66A2RUB6 SRRM1P2-201ENST00000464531 1192 ntBASIC5.81□□□□□ -1.48
CCDC66A2RUB6 UBFD1P1-201ENST00000473259 814 ntBASIC5.81□□□□□ -1.48
CCDC66A2RUB6 AP000797.2-201ENST00000475768 606 ntBASIC5.81□□□□□ -1.48
CCDC66A2RUB6 AC116337.2-201ENST00000477662 156 ntBASIC5.81□□□□□ -1.48
CCDC66A2RUB6 RPS27P23-201ENST00000487608 251 ntBASIC5.81□□□□□ -1.48
CCDC66A2RUB6 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.81□□□□□ -1.48
CCDC66A2RUB6 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC5.81□□□□□ -1.48
CCDC66A2RUB6 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC5.81□□□□□ -1.48
CCDC66A2RUB6 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.81□□□□□ -1.48
CCDC66A2RUB6 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.81□□□□□ -1.48
CCDC66A2RUB6 AC006499.4-201ENST00000510947 694 ntBASIC5.81□□□□□ -1.48
CCDC66A2RUB6 AC011352.1-201ENST00000512300 793 ntBASIC5.81□□□□□ -1.48
CCDC66A2RUB6 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.81□□□□□ -1.48
CCDC66A2RUB6 OR5AK1P-201ENST00000524837 922 ntBASIC5.81□□□□□ -1.48
CCDC66A2RUB6 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC5.81□□□□□ -1.48
CCDC66A2RUB6 HMGB1P42-201ENST00000532126 553 ntBASIC5.81□□□□□ -1.48
CCDC66A2RUB6 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
CCDC66A2RUB6 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC5.81□□□□□ -1.48
CCDC66A2RUB6 OR7K1P-201ENST00000546439 926 ntBASIC5.81□□□□□ -1.48
CCDC66A2RUB6 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.81□□□□□ -1.48
CCDC66A2RUB6 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.81□□□□□ -1.48
CCDC66A2RUB6 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC5.81□□□□□ -1.48
CCDC66A2RUB6 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.81□□□□□ -1.48
CCDC66A2RUB6 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.81□□□□□ -1.48
CCDC66A2RUB6 MIR4675-201ENST00000577898 77 ntBASIC5.81□□□□□ -1.48
CCDC66A2RUB6 AC107982.3-201ENST00000584957 985 ntBASIC5.81□□□□□ -1.48
CCDC66A2RUB6 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.81□□□□□ -1.48
CCDC66A2RUB6 NTAN1P1-201ENST00000603150 646 ntBASIC5.81□□□□□ -1.48
CCDC66A2RUB6 MTCYBP22-201ENST00000603788 447 ntBASIC5.81□□□□□ -1.48
CCDC66A2RUB6 AC087283.1-201ENST00000604029 1074 ntBASIC5.81□□□□□ -1.48
CCDC66A2RUB6 AC005332.6-201ENST00000613178 446 ntBASIC5.81□□□□□ -1.48
CCDC66A2RUB6 AC100793.4-201ENST00000613683 429 ntBASIC5.81□□□□□ -1.48
CCDC66A2RUB6 uc_338.9-201ENST00000617424 182 ntBASIC5.81□□□□□ -1.48
CCDC66A2RUB6 AC073968.1-201ENST00000618594 637 ntBASIC5.81□□□□□ -1.48
CCDC66A2RUB6 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
CCDC66A2RUB6 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC66A2RUB6 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
CCDC66A2RUB6 ASNSP1-204ENST00000641977 1664 ntBASIC5.81□□□□□ -1.48
CCDC66A2RUB6 DBF4P1-201ENST00000412976 1892 ntBASIC5.81□□□□□ -1.48
CCDC66A2RUB6 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.81□□□□□ -1.48
CCDC66A2RUB6 AC027514.1-201ENST00000588561 1603 ntBASIC5.81□□□□□ -1.48
CCDC66A2RUB6 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC66A2RUB6 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC66A2RUB6 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC66A2RUB6 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
CCDC66A2RUB6 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC66A2RUB6 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC66A2RUB6 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC66A2RUB6 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.8□□□□□ -1.48
CCDC66A2RUB6 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.8□□□□□ -1.48
CCDC66A2RUB6 Y_RNA.517-201ENST00000384551 106 ntBASIC5.8□□□□□ -1.48
CCDC66A2RUB6 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC66A2RUB6 RPSAP35-201ENST00000413753 818 ntBASIC5.8□□□□□ -1.48
CCDC66A2RUB6 UBE2V1P10-201ENST00000414685 269 ntBASIC5.8□□□□□ -1.48
CCDC66A2RUB6 ELOCP17-201ENST00000414751 326 ntBASIC5.8□□□□□ -1.48
CCDC66A2RUB6 CYCSP10-201ENST00000417973 294 ntBASIC5.8□□□□□ -1.48
CCDC66A2RUB6 BX323845.3-201ENST00000428215 527 ntBASIC5.8□□□□□ -1.48
CCDC66A2RUB6 HMGB3P24-201ENST00000433260 622 ntBASIC5.8□□□□□ -1.48
CCDC66A2RUB6 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.8□□□□□ -1.48
CCDC66A2RUB6 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC5.8□□□□□ -1.48
CCDC66A2RUB6 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC5.8□□□□□ -1.48
CCDC66A2RUB6 ZNF114P1-201ENST00000453500 292 ntBASIC5.8□□□□□ -1.48
CCDC66A2RUB6 HCG17-214ENST00000453558 732 ntTSL 5 BASIC5.8□□□□□ -1.48
CCDC66A2RUB6 DNAJB5P1-201ENST00000454004 806 ntBASIC5.8□□□□□ -1.48
CCDC66A2RUB6 RPL5P32-201ENST00000454085 879 ntBASIC5.8□□□□□ -1.48
CCDC66A2RUB6 HLA-DPA3-207ENST00000454398 229 ntBASIC5.8□□□□□ -1.48
CCDC66A2RUB6 RPL23AP71-201ENST00000470966 469 ntBASIC5.8□□□□□ -1.48
CCDC66A2RUB6 RPL7P16-201ENST00000479738 738 ntBASIC5.8□□□□□ -1.48
CCDC66A2RUB6 F11-205ENST00000492972 1204 ntTSL 2 BASIC5.8□□□□□ -1.48
CCDC66A2RUB6 AC109458.1-201ENST00000508858 316 ntBASIC5.8□□□□□ -1.48
CCDC66A2RUB6 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC5.8□□□□□ -1.48
CCDC66A2RUB6 AC114781.3-201ENST00000512083 142 ntBASIC5.8□□□□□ -1.48
CCDC66A2RUB6 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 131.1 ms