Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDC42BPBQ9Y5S2 MIR128-1-201ENST00000384921 82 ntBASIC5.6□□□□□ -1.51
CDC42BPBQ9Y5S2 AL512649.1-201ENST00000428997 581 ntBASIC5.6□□□□□ -1.51
CDC42BPBQ9Y5S2 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC5.6□□□□□ -1.51
CDC42BPBQ9Y5S2 SNORD105B-201ENST00000458770 79 ntBASIC5.6□□□□□ -1.51
CDC42BPBQ9Y5S2 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC5.6□□□□□ -1.51
CDC42BPBQ9Y5S2 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC5.6□□□□□ -1.51
CDC42BPBQ9Y5S2 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC5.6□□□□□ -1.51
CDC42BPBQ9Y5S2 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC5.6□□□□□ -1.51
CDC42BPBQ9Y5S2 UBTFL9-201ENST00000534504 1148 ntBASIC5.6□□□□□ -1.51
CDC42BPBQ9Y5S2 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC5.6□□□□□ -1.51
CDC42BPBQ9Y5S2 AL133247.2-201ENST00000603236 482 ntBASIC5.6□□□□□ -1.51
CDC42BPBQ9Y5S2 AL137843.1-201ENST00000605078 385 ntBASIC5.6□□□□□ -1.51
CDC42BPBQ9Y5S2 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.6□□□□□ -1.51
CDC42BPBQ9Y5S2 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
CDC42BPBQ9Y5S2 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
CDC42BPBQ9Y5S2 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC5.6□□□□□ -1.51
CDC42BPBQ9Y5S2 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.6□□□□□ -1.51
CDC42BPBQ9Y5S2 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.6□□□□□ -1.51
CDC42BPBQ9Y5S2 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.6□□□□□ -1.51
CDC42BPBQ9Y5S2 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC5.6□□□□□ -1.51
CDC42BPBQ9Y5S2 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDC42BPBQ9Y5S2 AL365440.1-201ENST00000436135 2167 ntBASIC5.6□□□□□ -1.51
CDC42BPBQ9Y5S2 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDC42BPBQ9Y5S2 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.6□□□□□ -1.51
CDC42BPBQ9Y5S2 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDC42BPBQ9Y5S2 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC5.6□□□□□ -1.51
CDC42BPBQ9Y5S2 CDY3P-201ENST00000454543 1618 ntBASIC5.6□□□□□ -1.51
CDC42BPBQ9Y5S2 RNA5SP120-201ENST00000410900 112 ntBASIC5.6□□□□□ -1.51
CDC42BPBQ9Y5S2 RN7SKP97-201ENST00000410966 333 ntBASIC5.6□□□□□ -1.51
CDC42BPBQ9Y5S2 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC5.6□□□□□ -1.51
CDC42BPBQ9Y5S2 AC127537.2-201ENST00000439258 465 ntBASIC5.6□□□□□ -1.51
CDC42BPBQ9Y5S2 RN7SL585P-201ENST00000470538 280 ntBASIC5.6□□□□□ -1.51
CDC42BPBQ9Y5S2 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC5.6□□□□□ -1.51
CDC42BPBQ9Y5S2 AC093663.1-201ENST00000497190 394 ntBASIC5.6□□□□□ -1.51
CDC42BPBQ9Y5S2 NACA-211ENST00000548563 827 ntTSL 5 BASIC5.6□□□□□ -1.51
CDC42BPBQ9Y5S2 MEG8-215ENST00000555354 469 ntTSL 3 BASIC5.6□□□□□ -1.51
CDC42BPBQ9Y5S2 IGKV2OR2-8-201ENST00000558710 300 ntBASIC5.6□□□□□ -1.51
CDC42BPBQ9Y5S2 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC5.6□□□□□ -1.51
CDC42BPBQ9Y5S2 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC5.6□□□□□ -1.51
CDC42BPBQ9Y5S2 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC5.6□□□□□ -1.51
CDC42BPBQ9Y5S2 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC5.6□□□□□ -1.51
CDC42BPBQ9Y5S2 ATE1-AS1-202ENST00000636460 506 ntBASIC5.6□□□□□ -1.51
CDC42BPBQ9Y5S2 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CDC42BPBQ9Y5S2 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC5.59□□□□□ -1.51
CDC42BPBQ9Y5S2 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
CDC42BPBQ9Y5S2 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
CDC42BPBQ9Y5S2 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
CDC42BPBQ9Y5S2 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CDC42BPBQ9Y5S2 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CDC42BPBQ9Y5S2 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CDC42BPBQ9Y5S2 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC5.59□□□□□ -1.51
CDC42BPBQ9Y5S2 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC5.59□□□□□ -1.51
CDC42BPBQ9Y5S2 OSTCP5-201ENST00000425293 453 ntBASIC5.59□□□□□ -1.51
CDC42BPBQ9Y5S2 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC5.59□□□□□ -1.51
CDC42BPBQ9Y5S2 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC5.59□□□□□ -1.51
CDC42BPBQ9Y5S2 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.59□□□□□ -1.51
CDC42BPBQ9Y5S2 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC5.59□□□□□ -1.51
CDC42BPBQ9Y5S2 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC5.59□□□□□ -1.51
CDC42BPBQ9Y5S2 AL354976.1-201ENST00000613843 387 ntBASIC5.59□□□□□ -1.51
CDC42BPBQ9Y5S2 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
CDC42BPBQ9Y5S2 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CDC42BPBQ9Y5S2 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
CDC42BPBQ9Y5S2 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.58□□□□□ -1.52
CDC42BPBQ9Y5S2 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CDC42BPBQ9Y5S2 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC5.58□□□□□ -1.52
CDC42BPBQ9Y5S2 RNA5SP50-201ENST00000363731 107 ntBASIC5.58□□□□□ -1.52
CDC42BPBQ9Y5S2 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC5.58□□□□□ -1.52
CDC42BPBQ9Y5S2 AL591363.1-201ENST00000450091 483 ntBASIC5.58□□□□□ -1.52
CDC42BPBQ9Y5S2 EIF4A1P11-201ENST00000451239 222 ntBASIC5.58□□□□□ -1.52
CDC42BPBQ9Y5S2 RPL6P9-201ENST00000466502 859 ntBASIC5.58□□□□□ -1.52
CDC42BPBQ9Y5S2 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC5.58□□□□□ -1.52
CDC42BPBQ9Y5S2 AC010285.3-201ENST00000511668 676 ntBASIC5.58□□□□□ -1.52
CDC42BPBQ9Y5S2 LEF1-218ENST00000512172 598 ntTSL 2 BASIC5.58□□□□□ -1.52
CDC42BPBQ9Y5S2 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC5.58□□□□□ -1.52
CDC42BPBQ9Y5S2 AC090877.1-201ENST00000561418 344 ntBASIC5.58□□□□□ -1.52
CDC42BPBQ9Y5S2 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CDC42BPBQ9Y5S2 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CDC42BPBQ9Y5S2 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CDC42BPBQ9Y5S2 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
CDC42BPBQ9Y5S2 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CDC42BPBQ9Y5S2 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
CDC42BPBQ9Y5S2 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
CDC42BPBQ9Y5S2 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.57□□□□□ -1.52
CDC42BPBQ9Y5S2 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
CDC42BPBQ9Y5S2 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.57□□□□□ -1.52
CDC42BPBQ9Y5S2 KCTD9P3-201ENST00000434597 1169 ntBASIC5.57□□□□□ -1.52
CDC42BPBQ9Y5S2 AC010342.1-201ENST00000514047 877 ntBASIC5.57□□□□□ -1.52
CDC42BPBQ9Y5S2 RNU1-103P-201ENST00000516502 125 ntBASIC5.57□□□□□ -1.52
CDC42BPBQ9Y5S2 AC023161.2-201ENST00000551218 780 ntBASIC5.57□□□□□ -1.52
CDC42BPBQ9Y5S2 TRAV15-201ENST00000556680 249 ntBASIC5.57□□□□□ -1.52
CDC42BPBQ9Y5S2 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC5.57□□□□□ -1.52
CDC42BPBQ9Y5S2 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC5.57□□□□□ -1.52
CDC42BPBQ9Y5S2 AC009303.3-201ENST00000591103 736 ntBASIC5.57□□□□□ -1.52
CDC42BPBQ9Y5S2 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC5.57□□□□□ -1.52
CDC42BPBQ9Y5S2 BNIP3P41-202ENST00000616656 861 ntBASIC5.57□□□□□ -1.52
CDC42BPBQ9Y5S2 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
CDC42BPBQ9Y5S2 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC5.57□□□□□ -1.52
CDC42BPBQ9Y5S2 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
CDC42BPBQ9Y5S2 MAPK10-303ENST00000641324 3959 ntBASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 128.7 ms