Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AL390334.1-201ENST00000556395 450 ntBASIC5.81□□□□□ -1.48
COL4A3BPQ9Y5P4 AC040958.1-201ENST00000561102 201 ntBASIC5.81□□□□□ -1.48
COL4A3BPQ9Y5P4 AGGF1P8-201ENST00000562979 1000 ntBASIC5.81□□□□□ -1.48
COL4A3BPQ9Y5P4 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC5.81□□□□□ -1.48
COL4A3BPQ9Y5P4 AC090312.1-201ENST00000580637 348 ntBASIC5.81□□□□□ -1.48
COL4A3BPQ9Y5P4 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.81□□□□□ -1.48
COL4A3BPQ9Y5P4 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
COL4A3BPQ9Y5P4 PRPF19P1-201ENST00000584766 898 ntBASIC5.81□□□□□ -1.48
COL4A3BPQ9Y5P4 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC5.81□□□□□ -1.48
COL4A3BPQ9Y5P4 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.81□□□□□ -1.48
COL4A3BPQ9Y5P4 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.81□□□□□ -1.48
COL4A3BPQ9Y5P4 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC5.81□□□□□ -1.48
COL4A3BPQ9Y5P4 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.81□□□□□ -1.48
COL4A3BPQ9Y5P4 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
COL4A3BPQ9Y5P4 AC131159.1-201ENST00000621854 213 ntBASIC5.81□□□□□ -1.48
COL4A3BPQ9Y5P4 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
COL4A3BPQ9Y5P4 LINC01739-205ENST00000641890 573 ntBASIC5.81□□□□□ -1.48
COL4A3BPQ9Y5P4 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
COL4A3BPQ9Y5P4 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
COL4A3BPQ9Y5P4 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
COL4A3BPQ9Y5P4 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
COL4A3BPQ9Y5P4 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.81□□□□□ -1.48
COL4A3BPQ9Y5P4 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
COL4A3BPQ9Y5P4 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
COL4A3BPQ9Y5P4 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
COL4A3BPQ9Y5P4 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
COL4A3BPQ9Y5P4 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
COL4A3BPQ9Y5P4 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
COL4A3BPQ9Y5P4 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
COL4A3BPQ9Y5P4 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC5.8□□□□□ -1.48
COL4A3BPQ9Y5P4 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
COL4A3BPQ9Y5P4 RNU6-216P-201ENST00000363282 104 ntBASIC5.8□□□□□ -1.48
COL4A3BPQ9Y5P4 RNU6-1243P-201ENST00000364028 107 ntBASIC5.8□□□□□ -1.48
COL4A3BPQ9Y5P4 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
COL4A3BPQ9Y5P4 MIR600-201ENST00000385007 98 ntBASIC5.8□□□□□ -1.48
COL4A3BPQ9Y5P4 SSXP10-201ENST00000402595 565 ntBASIC5.8□□□□□ -1.48
COL4A3BPQ9Y5P4 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
COL4A3BPQ9Y5P4 AC069218.2-201ENST00000411665 344 ntBASIC5.8□□□□□ -1.48
COL4A3BPQ9Y5P4 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.8□□□□□ -1.48
COL4A3BPQ9Y5P4 AL133384.1-201ENST00000412744 351 ntBASIC5.8□□□□□ -1.48
COL4A3BPQ9Y5P4 COX5BP7-201ENST00000414780 274 ntBASIC5.8□□□□□ -1.48
COL4A3BPQ9Y5P4 AC062016.2-201ENST00000420950 676 ntBASIC5.8□□□□□ -1.48
COL4A3BPQ9Y5P4 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.8□□□□□ -1.48
COL4A3BPQ9Y5P4 SDCBPP2-201ENST00000424643 885 ntBASIC5.8□□□□□ -1.48
COL4A3BPQ9Y5P4 RPS29P10-201ENST00000439197 166 ntBASIC5.8□□□□□ -1.48
COL4A3BPQ9Y5P4 RPL23AP16-201ENST00000441715 421 ntBASIC5.8□□□□□ -1.48
COL4A3BPQ9Y5P4 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC5.8□□□□□ -1.48
COL4A3BPQ9Y5P4 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC5.8□□□□□ -1.48
COL4A3BPQ9Y5P4 RPL12P26-201ENST00000452430 487 ntBASIC5.8□□□□□ -1.48
COL4A3BPQ9Y5P4 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC5.8□□□□□ -1.48
COL4A3BPQ9Y5P4 RN7SL610P-201ENST00000463845 291 ntBASIC5.8□□□□□ -1.48
COL4A3BPQ9Y5P4 RN7SL329P-201ENST00000467740 299 ntBASIC5.8□□□□□ -1.48
COL4A3BPQ9Y5P4 AC109462.1-201ENST00000491087 368 ntBASIC5.8□□□□□ -1.48
COL4A3BPQ9Y5P4 AL049874.2-201ENST00000492636 288 ntBASIC5.8□□□□□ -1.48
COL4A3BPQ9Y5P4 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC5.8□□□□□ -1.48
COL4A3BPQ9Y5P4 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC5.8□□□□□ -1.48
COL4A3BPQ9Y5P4 AC104090.1-201ENST00000506341 1171 ntBASIC5.8□□□□□ -1.48
COL4A3BPQ9Y5P4 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC5.8□□□□□ -1.48
COL4A3BPQ9Y5P4 RNA5SP230-201ENST00000517039 122 ntBASIC5.8□□□□□ -1.48
COL4A3BPQ9Y5P4 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.8□□□□□ -1.48
COL4A3BPQ9Y5P4 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.8□□□□□ -1.48
COL4A3BPQ9Y5P4 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC5.8□□□□□ -1.48
COL4A3BPQ9Y5P4 MTND2P26-201ENST00000528255 1029 ntBASIC5.8□□□□□ -1.48
COL4A3BPQ9Y5P4 SLC2A13P1-201ENST00000531560 322 ntBASIC5.8□□□□□ -1.48
COL4A3BPQ9Y5P4 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC5.8□□□□□ -1.48
COL4A3BPQ9Y5P4 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.8□□□□□ -1.48
COL4A3BPQ9Y5P4 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.8□□□□□ -1.48
COL4A3BPQ9Y5P4 DUXAP6-201ENST00000553858 601 ntBASIC5.8□□□□□ -1.48
COL4A3BPQ9Y5P4 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
COL4A3BPQ9Y5P4 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC5.8□□□□□ -1.48
COL4A3BPQ9Y5P4 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC5.8□□□□□ -1.48
COL4A3BPQ9Y5P4 SNORD39.3-201ENST00000584451 71 ntBASIC5.8□□□□□ -1.48
COL4A3BPQ9Y5P4 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC5.8□□□□□ -1.48
COL4A3BPQ9Y5P4 AC006272.2-201ENST00000594725 163 ntBASIC5.8□□□□□ -1.48
COL4A3BPQ9Y5P4 AC087763.1-201ENST00000603391 286 ntBASIC5.8□□□□□ -1.48
COL4A3BPQ9Y5P4 AC116651.1-201ENST00000609724 556 ntBASIC5.8□□□□□ -1.48
COL4A3BPQ9Y5P4 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.8□□□□□ -1.48
COL4A3BPQ9Y5P4 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.8□□□□□ -1.48
COL4A3BPQ9Y5P4 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC5.8□□□□□ -1.48
COL4A3BPQ9Y5P4 AC068870.2-201ENST00000620635 389 ntBASIC5.8□□□□□ -1.48
COL4A3BPQ9Y5P4 AC099494.2-201ENST00000623371 978 ntBASIC5.8□□□□□ -1.48
COL4A3BPQ9Y5P4 AC135068.12-201ENST00000637370 931 ntBASIC5.8□□□□□ -1.48
COL4A3BPQ9Y5P4 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.8□□□□□ -1.48
COL4A3BPQ9Y5P4 CASC19-222ENST00000641321 1173 ntBASIC5.8□□□□□ -1.48
COL4A3BPQ9Y5P4 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.8□□□□□ -1.48
COL4A3BPQ9Y5P4 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC5.8□□□□□ -1.48
COL4A3BPQ9Y5P4 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC5.8□□□□□ -1.48
COL4A3BPQ9Y5P4 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.8□□□□□ -1.48
COL4A3BPQ9Y5P4 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.8□□□□□ -1.48
COL4A3BPQ9Y5P4 ELL2P4-201ENST00000446870 1376 ntBASIC5.8□□□□□ -1.48
COL4A3BPQ9Y5P4 ZNF37BP-203ENST00000452306 1352 ntBASIC5.8□□□□□ -1.48
COL4A3BPQ9Y5P4 AL049555.1-201ENST00000562834 1933 ntBASIC5.8□□□□□ -1.48
COL4A3BPQ9Y5P4 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.8□□□□□ -1.48
COL4A3BPQ9Y5P4 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
COL4A3BPQ9Y5P4 AC117529.2-201ENST00000512159 2068 ntBASIC5.79□□□□□ -1.48
COL4A3BPQ9Y5P4 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
COL4A3BPQ9Y5P4 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
COL4A3BPQ9Y5P4 AL122126.1-201ENST00000546905 1318 ntBASIC5.79□□□□□ -1.48
COL4A3BPQ9Y5P4 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
COL4A3BPQ9Y5P4 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms