Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.34□□□□□ -1.55
SSX2IPQ9Y2D8 AC025260.1-201ENST00000548858 430 ntBASIC5.34□□□□□ -1.55
SSX2IPQ9Y2D8 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC5.34□□□□□ -1.55
SSX2IPQ9Y2D8 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC5.34□□□□□ -1.55
SSX2IPQ9Y2D8 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC5.34□□□□□ -1.55
SSX2IPQ9Y2D8 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.34□□□□□ -1.55
SSX2IPQ9Y2D8 MTCYBP33-201ENST00000575007 1130 ntBASIC5.34□□□□□ -1.55
SSX2IPQ9Y2D8 VN1R83P-201ENST00000595685 445 ntBASIC5.34□□□□□ -1.55
SSX2IPQ9Y2D8 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC5.34□□□□□ -1.55
SSX2IPQ9Y2D8 AC125494.3-201ENST00000602759 455 ntBASIC5.34□□□□□ -1.55
SSX2IPQ9Y2D8 AL451086.1-201ENST00000605596 223 ntBASIC5.34□□□□□ -1.55
SSX2IPQ9Y2D8 AC019193.2-201ENST00000610012 634 ntBASIC5.34□□□□□ -1.55
SSX2IPQ9Y2D8 VIS1.1-201ENST00000610517 203 ntBASIC5.34□□□□□ -1.55
SSX2IPQ9Y2D8 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.34□□□□□ -1.55
SSX2IPQ9Y2D8 AC139769.3-201ENST00000618383 175 ntBASIC5.34□□□□□ -1.55
SSX2IPQ9Y2D8 AL603755.1-201ENST00000619504 163 ntBASIC5.34□□□□□ -1.55
SSX2IPQ9Y2D8 AC007342.8-201ENST00000623278 678 ntBASIC5.34□□□□□ -1.55
SSX2IPQ9Y2D8 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC5.34□□□□□ -1.55
SSX2IPQ9Y2D8 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.34□□□□□ -1.55
SSX2IPQ9Y2D8 ZNF663P-202ENST00000641770 1131 ntBASIC5.34□□□□□ -1.55
SSX2IPQ9Y2D8 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.34□□□□□ -1.55
SSX2IPQ9Y2D8 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.34□□□□□ -1.55
SSX2IPQ9Y2D8 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SSX2IPQ9Y2D8 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
SSX2IPQ9Y2D8 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.56
SSX2IPQ9Y2D8 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.34□□□□□ -1.56
SSX2IPQ9Y2D8 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.34□□□□□ -1.56
SSX2IPQ9Y2D8 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SSX2IPQ9Y2D8 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC5.33□□□□□ -1.56
SSX2IPQ9Y2D8 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
SSX2IPQ9Y2D8 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC5.33□□□□□ -1.56
SSX2IPQ9Y2D8 Z95327.2-201ENST00000414579 1873 ntBASIC5.33□□□□□ -1.56
SSX2IPQ9Y2D8 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SSX2IPQ9Y2D8 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
SSX2IPQ9Y2D8 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SSX2IPQ9Y2D8 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.33□□□□□ -1.56
SSX2IPQ9Y2D8 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
SSX2IPQ9Y2D8 ENSAP3-201ENST00000312710 333 ntBASIC5.33□□□□□ -1.56
SSX2IPQ9Y2D8 UBBP2-201ENST00000376781 231 ntBASIC5.33□□□□□ -1.56
SSX2IPQ9Y2D8 RNU6-398P-201ENST00000384143 109 ntBASIC5.33□□□□□ -1.56
SSX2IPQ9Y2D8 RNU6-532P-201ENST00000384318 107 ntBASIC5.33□□□□□ -1.56
SSX2IPQ9Y2D8 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.33□□□□□ -1.56
SSX2IPQ9Y2D8 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC5.33□□□□□ -1.56
SSX2IPQ9Y2D8 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC5.33□□□□□ -1.56
SSX2IPQ9Y2D8 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC5.33□□□□□ -1.56
SSX2IPQ9Y2D8 OR6K4P-201ENST00000423179 955 ntBASIC5.33□□□□□ -1.56
SSX2IPQ9Y2D8 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC5.33□□□□□ -1.56
SSX2IPQ9Y2D8 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.33□□□□□ -1.56
SSX2IPQ9Y2D8 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.33□□□□□ -1.56
SSX2IPQ9Y2D8 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC5.33□□□□□ -1.56
SSX2IPQ9Y2D8 AC007327.1-201ENST00000447461 264 ntBASIC5.33□□□□□ -1.56
SSX2IPQ9Y2D8 AC104978.1-201ENST00000449387 391 ntBASIC5.33□□□□□ -1.56
SSX2IPQ9Y2D8 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC5.33□□□□□ -1.56
SSX2IPQ9Y2D8 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.33□□□□□ -1.56
SSX2IPQ9Y2D8 AC234781.3-201ENST00000452540 973 ntBASIC5.33□□□□□ -1.56
SSX2IPQ9Y2D8 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SSX2IPQ9Y2D8 NDUFA12P1-201ENST00000455914 406 ntBASIC5.33□□□□□ -1.56
SSX2IPQ9Y2D8 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC5.33□□□□□ -1.56
SSX2IPQ9Y2D8 RN7SL441P-201ENST00000492388 296 ntBASIC5.33□□□□□ -1.56
SSX2IPQ9Y2D8 AC008897.1-201ENST00000494006 347 ntBASIC5.33□□□□□ -1.56
SSX2IPQ9Y2D8 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.33□□□□□ -1.56
SSX2IPQ9Y2D8 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC5.33□□□□□ -1.56
SSX2IPQ9Y2D8 AC118282.2-201ENST00000508739 374 ntBASIC5.33□□□□□ -1.56
SSX2IPQ9Y2D8 AC104108.1-201ENST00000509930 412 ntBASIC5.33□□□□□ -1.56
SSX2IPQ9Y2D8 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC5.33□□□□□ -1.56
SSX2IPQ9Y2D8 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
SSX2IPQ9Y2D8 AP003461.1-201ENST00000528866 78 ntBASIC5.33□□□□□ -1.56
SSX2IPQ9Y2D8 OR5AN2P-201ENST00000534535 896 ntBASIC5.33□□□□□ -1.56
SSX2IPQ9Y2D8 AP006289.1-201ENST00000538089 277 ntBASIC5.33□□□□□ -1.56
SSX2IPQ9Y2D8 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SSX2IPQ9Y2D8 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.33□□□□□ -1.56
SSX2IPQ9Y2D8 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.33□□□□□ -1.56
SSX2IPQ9Y2D8 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.33□□□□□ -1.56
SSX2IPQ9Y2D8 ELOCP28-201ENST00000590044 317 ntBASIC5.33□□□□□ -1.56
SSX2IPQ9Y2D8 AC146944.4-201ENST00000602697 718 ntBASIC5.33□□□□□ -1.56
SSX2IPQ9Y2D8 AC121247.2-201ENST00000604776 136 ntBASIC5.33□□□□□ -1.56
SSX2IPQ9Y2D8 AC018638.7-201ENST00000605836 1114 ntBASIC5.33□□□□□ -1.56
SSX2IPQ9Y2D8 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC5.33□□□□□ -1.56
SSX2IPQ9Y2D8 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
SSX2IPQ9Y2D8 STMN1P1-201ENST00000617809 440 ntBASIC5.33□□□□□ -1.56
SSX2IPQ9Y2D8 AC024595.1-201ENST00000623088 387 ntBASIC5.33□□□□□ -1.56
SSX2IPQ9Y2D8 CR381572.2-201ENST00000624852 397 ntBASIC5.33□□□□□ -1.56
SSX2IPQ9Y2D8 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
SSX2IPQ9Y2D8 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SSX2IPQ9Y2D8 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SSX2IPQ9Y2D8 MAPK10-349ENST00000641767 3661 ntBASIC5.33□□□□□ -1.56
SSX2IPQ9Y2D8 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.33□□□□□ -1.56
SSX2IPQ9Y2D8 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
SSX2IPQ9Y2D8 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SSX2IPQ9Y2D8 AC026951.1-201ENST00000559530 2459 ntBASIC5.32□□□□□ -1.56
SSX2IPQ9Y2D8 DDX18P5-201ENST00000534547 1306 ntBASIC5.32□□□□□ -1.56
SSX2IPQ9Y2D8 AL121950.1-201ENST00000624993 2077 ntBASIC5.32□□□□□ -1.56
SSX2IPQ9Y2D8 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
SSX2IPQ9Y2D8 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.32□□□□□ -1.56
SSX2IPQ9Y2D8 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.32□□□□□ -1.56
SSX2IPQ9Y2D8 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
SSX2IPQ9Y2D8 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SSX2IPQ9Y2D8 RNU6-83P-201ENST00000384568 112 ntBASIC5.32□□□□□ -1.56
SSX2IPQ9Y2D8 AC104297.1-201ENST00000393779 870 ntBASIC5.32□□□□□ -1.56
SSX2IPQ9Y2D8 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 174.1 ms