Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 MIR5699-201ENST00000578903 90 ntBASIC4.94□□□□□ -1.62
EBF3Q9H4W6 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC4.94□□□□□ -1.62
EBF3Q9H4W6 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC4.94□□□□□ -1.62
EBF3Q9H4W6 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
EBF3Q9H4W6 AL122125.1-201ENST00000616999 600 ntBASIC4.94□□□□□ -1.62
EBF3Q9H4W6 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
EBF3Q9H4W6 AP002782.1-201ENST00000623107 614 ntBASIC4.94□□□□□ -1.62
EBF3Q9H4W6 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
EBF3Q9H4W6 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
EBF3Q9H4W6 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.94□□□□□ -1.62
EBF3Q9H4W6 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
EBF3Q9H4W6 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.93□□□□□ -1.62
EBF3Q9H4W6 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
EBF3Q9H4W6 SAMMSON-213ENST00000641336 1521 ntBASIC4.93□□□□□ -1.62
EBF3Q9H4W6 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.93□□□□□ -1.62
EBF3Q9H4W6 TTC39DP-201ENST00000416781 1688 ntBASIC4.93□□□□□ -1.62
EBF3Q9H4W6 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.93□□□□□ -1.62
EBF3Q9H4W6 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
EBF3Q9H4W6 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
EBF3Q9H4W6 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
EBF3Q9H4W6 RNU4-24P-201ENST00000364565 139 ntBASIC4.93□□□□□ -1.62
EBF3Q9H4W6 RNU1-82P-201ENST00000390851 165 ntBASIC4.93□□□□□ -1.62
EBF3Q9H4W6 AP002784.2-201ENST00000397300 549 ntBASIC4.93□□□□□ -1.62
EBF3Q9H4W6 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.93□□□□□ -1.62
EBF3Q9H4W6 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC4.93□□□□□ -1.62
EBF3Q9H4W6 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC4.93□□□□□ -1.62
EBF3Q9H4W6 TIMM9P2-201ENST00000419324 266 ntBASIC4.93□□□□□ -1.62
EBF3Q9H4W6 SEPT2P1-201ENST00000419651 180 ntBASIC4.93□□□□□ -1.62
EBF3Q9H4W6 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
EBF3Q9H4W6 RPS17P8-201ENST00000434525 335 ntBASIC4.93□□□□□ -1.62
EBF3Q9H4W6 AL353706.1-201ENST00000436728 494 ntBASIC4.93□□□□□ -1.62
EBF3Q9H4W6 AL138787.1-202ENST00000437804 898 ntBASIC4.93□□□□□ -1.62
EBF3Q9H4W6 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.93□□□□□ -1.62
EBF3Q9H4W6 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.93□□□□□ -1.62
EBF3Q9H4W6 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
EBF3Q9H4W6 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
EBF3Q9H4W6 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC4.93□□□□□ -1.62
EBF3Q9H4W6 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
EBF3Q9H4W6 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC4.93□□□□□ -1.62
EBF3Q9H4W6 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.93□□□□□ -1.62
EBF3Q9H4W6 AC013356.1-201ENST00000489027 564 ntBASIC4.93□□□□□ -1.62
EBF3Q9H4W6 AC107401.1-201ENST00000503426 685 ntBASIC4.93□□□□□ -1.62
EBF3Q9H4W6 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC4.93□□□□□ -1.62
EBF3Q9H4W6 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.93□□□□□ -1.62
EBF3Q9H4W6 AC133963.2-201ENST00000513686 578 ntBASIC4.93□□□□□ -1.62
EBF3Q9H4W6 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.93□□□□□ -1.62
EBF3Q9H4W6 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC4.93□□□□□ -1.62
EBF3Q9H4W6 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.93□□□□□ -1.62
EBF3Q9H4W6 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.93□□□□□ -1.62
EBF3Q9H4W6 AP003717.3-201ENST00000544832 1180 ntBASIC4.93□□□□□ -1.62
EBF3Q9H4W6 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.93□□□□□ -1.62
EBF3Q9H4W6 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC4.93□□□□□ -1.62
EBF3Q9H4W6 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC4.93□□□□□ -1.62
EBF3Q9H4W6 AC099786.3-201ENST00000565735 1410 ntBASIC4.93□□□□□ -1.62
EBF3Q9H4W6 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC4.93□□□□□ -1.62
EBF3Q9H4W6 SNORA74C-1-201ENST00000580726 201 ntBASIC4.93□□□□□ -1.62
EBF3Q9H4W6 NBR2-204ENST00000587322 63 ntBASIC4.93□□□□□ -1.62
EBF3Q9H4W6 AL133507.1-201ENST00000605269 557 ntBASIC4.93□□□□□ -1.62
EBF3Q9H4W6 AL583856.2-201ENST00000606298 543 ntBASIC4.93□□□□□ -1.62
EBF3Q9H4W6 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC4.93□□□□□ -1.62
EBF3Q9H4W6 SNORD91B-202ENST00000608459 222 ntBASIC4.93□□□□□ -1.62
EBF3Q9H4W6 AL445423.1-201ENST00000609941 536 ntBASIC4.93□□□□□ -1.62
EBF3Q9H4W6 HULC.1-201ENST00000612720 240 ntBASIC4.93□□□□□ -1.62
EBF3Q9H4W6 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
EBF3Q9H4W6 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC4.93□□□□□ -1.62
EBF3Q9H4W6 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
EBF3Q9H4W6 AL137100.1-201ENST00000556703 1620 ntBASIC4.93□□□□□ -1.62
EBF3Q9H4W6 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.93□□□□□ -1.62
EBF3Q9H4W6 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
EBF3Q9H4W6 TLK1P1-201ENST00000456760 2440 ntBASIC4.93□□□□□ -1.62
EBF3Q9H4W6 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.93□□□□□ -1.62
EBF3Q9H4W6 AL133268.1-201ENST00000405676 1401 ntBASIC4.92□□□□□ -1.62
EBF3Q9H4W6 FAM3C2-201ENST00000312214 681 ntBASIC4.92□□□□□ -1.62
EBF3Q9H4W6 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC4.92□□□□□ -1.62
EBF3Q9H4W6 SNORD116-9-201ENST00000384000 95 ntBASIC4.92□□□□□ -1.62
EBF3Q9H4W6 SNORD116-3-201ENST00000384287 95 ntBASIC4.92□□□□□ -1.62
EBF3Q9H4W6 SNORD116-7-201ENST00000384404 95 ntBASIC4.92□□□□□ -1.62
EBF3Q9H4W6 SNORD116-5-201ENST00000384462 95 ntBASIC4.92□□□□□ -1.62
EBF3Q9H4W6 HMGB1P10-201ENST00000395823 563 ntBASIC4.92□□□□□ -1.62
EBF3Q9H4W6 HMGB1P13-201ENST00000406019 642 ntBASIC4.92□□□□□ -1.62
EBF3Q9H4W6 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.92□□□□□ -1.62
EBF3Q9H4W6 Y_RNA.619-201ENST00000410951 90 ntBASIC4.92□□□□□ -1.62
EBF3Q9H4W6 AL449283.1-202ENST00000418249 604 ntBASIC4.92□□□□□ -1.62
EBF3Q9H4W6 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4.92□□□□□ -1.62
EBF3Q9H4W6 LINC00993-201ENST00000420453 540 ntBASIC4.92□□□□□ -1.62
EBF3Q9H4W6 AL645608.4-201ENST00000423619 154 ntBASIC4.92□□□□□ -1.62
EBF3Q9H4W6 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.92□□□□□ -1.62
EBF3Q9H4W6 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC4.92□□□□□ -1.62
EBF3Q9H4W6 RPS27P5-201ENST00000444247 244 ntBASIC4.92□□□□□ -1.62
EBF3Q9H4W6 MTND2P4-201ENST00000445034 1004 ntBASIC4.92□□□□□ -1.62
EBF3Q9H4W6 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC4.92□□□□□ -1.62
EBF3Q9H4W6 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC4.92□□□□□ -1.62
EBF3Q9H4W6 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC4.92□□□□□ -1.62
EBF3Q9H4W6 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.92□□□□□ -1.62
EBF3Q9H4W6 ZNF736P5Y-201ENST00000451173 805 ntBASIC4.92□□□□□ -1.62
EBF3Q9H4W6 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC4.92□□□□□ -1.62
EBF3Q9H4W6 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.92□□□□□ -1.62
EBF3Q9H4W6 CYCSP34-201ENST00000458172 304 ntBASIC4.92□□□□□ -1.62
EBF3Q9H4W6 AC068587.1-201ENST00000483613 781 ntBASIC4.92□□□□□ -1.62
EBF3Q9H4W6 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms