Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.17□□□□□ -1.74
CCDC42Q96M95 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.17□□□□□ -1.74
CCDC42Q96M95 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CCDC42Q96M95 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC42Q96M95 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.16□□□□□ -1.74
CCDC42Q96M95 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC42Q96M95 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC42Q96M95 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC42Q96M95 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC42Q96M95 RPS27AP11-201ENST00000402798 447 ntBASIC4.16□□□□□ -1.74
CCDC42Q96M95 SNORA81-201ENST00000408493 178 ntBASIC4.16□□□□□ -1.74
CCDC42Q96M95 RPL21P109-201ENST00000422213 475 ntBASIC4.16□□□□□ -1.74
CCDC42Q96M95 COX6CP15-201ENST00000426313 211 ntBASIC4.16□□□□□ -1.74
CCDC42Q96M95 AC068287.1-201ENST00000430283 295 ntBASIC4.16□□□□□ -1.74
CCDC42Q96M95 MRPL50P1-201ENST00000431951 384 ntBASIC4.16□□□□□ -1.74
CCDC42Q96M95 RPS20P1-201ENST00000434853 354 ntBASIC4.16□□□□□ -1.74
CCDC42Q96M95 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.16□□□□□ -1.74
CCDC42Q96M95 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.16□□□□□ -1.74
CCDC42Q96M95 SKP1P1-201ENST00000438081 489 ntBASIC4.16□□□□□ -1.74
CCDC42Q96M95 UBE2V2P4-201ENST00000447495 259 ntBASIC4.16□□□□□ -1.74
CCDC42Q96M95 EIF4A1P11-201ENST00000451239 222 ntBASIC4.16□□□□□ -1.74
CCDC42Q96M95 MTCO3P16-201ENST00000454456 754 ntBASIC4.16□□□□□ -1.74
CCDC42Q96M95 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.16□□□□□ -1.74
CCDC42Q96M95 RPL21P11-201ENST00000461458 483 ntBASIC4.16□□□□□ -1.74
CCDC42Q96M95 AC037198.2-201ENST00000478845 733 ntBASIC4.16□□□□□ -1.74
CCDC42Q96M95 AC007686.1-201ENST00000488511 463 ntBASIC4.16□□□□□ -1.74
CCDC42Q96M95 RPS23P1-201ENST00000491662 432 ntBASIC4.16□□□□□ -1.74
CCDC42Q96M95 AC106806.2-201ENST00000509365 500 ntBASIC4.16□□□□□ -1.74
CCDC42Q96M95 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.16□□□□□ -1.74
CCDC42Q96M95 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.16□□□□□ -1.74
CCDC42Q96M95 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.16□□□□□ -1.74
CCDC42Q96M95 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.16□□□□□ -1.74
CCDC42Q96M95 AGGF1P8-201ENST00000562979 1000 ntBASIC4.16□□□□□ -1.74
CCDC42Q96M95 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC4.16□□□□□ -1.74
CCDC42Q96M95 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.16□□□□□ -1.74
CCDC42Q96M95 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC42Q96M95 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC4.16□□□□□ -1.74
CCDC42Q96M95 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.16□□□□□ -1.74
CCDC42Q96M95 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
CCDC42Q96M95 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.16□□□□□ -1.74
CCDC42Q96M95 AC233968.1-201ENST00000611212 1300 ntBASIC4.16□□□□□ -1.74
CCDC42Q96M95 BX005019.1-201ENST00000561881 1810 ntBASIC4.16□□□□□ -1.74
CCDC42Q96M95 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC42Q96M95 CR381670.1-201ENST00000624291 1693 ntBASIC4.16□□□□□ -1.74
CCDC42Q96M95 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC42Q96M95 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.74
CCDC42Q96M95 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.15□□□□□ -1.74
CCDC42Q96M95 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
CCDC42Q96M95 AL049555.1-201ENST00000562834 1933 ntBASIC4.15□□□□□ -1.74
CCDC42Q96M95 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
CCDC42Q96M95 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
CCDC42Q96M95 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CCDC42Q96M95 AC010329.2-201ENST00000595195 2737 ntBASIC4.15□□□□□ -1.75
CCDC42Q96M95 AC007685.1-201ENST00000329806 452 ntBASIC4.15□□□□□ -1.75
CCDC42Q96M95 AC016397.1-201ENST00000412463 242 ntBASIC4.15□□□□□ -1.75
CCDC42Q96M95 AC098592.2-201ENST00000413158 265 ntBASIC4.15□□□□□ -1.75
CCDC42Q96M95 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.15□□□□□ -1.75
CCDC42Q96M95 AL592293.2-201ENST00000422292 996 ntBASIC4.15□□□□□ -1.75
CCDC42Q96M95 AC009480.2-201ENST00000422916 432 ntBASIC4.15□□□□□ -1.75
CCDC42Q96M95 AL158073.1-201ENST00000426848 1104 ntBASIC4.15□□□□□ -1.75
CCDC42Q96M95 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.15□□□□□ -1.75
CCDC42Q96M95 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.15□□□□□ -1.75
CCDC42Q96M95 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.15□□□□□ -1.75
CCDC42Q96M95 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CCDC42Q96M95 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.15□□□□□ -1.75
CCDC42Q96M95 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC4.15□□□□□ -1.75
CCDC42Q96M95 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.15□□□□□ -1.75
CCDC42Q96M95 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC4.15□□□□□ -1.75
CCDC42Q96M95 RPS29P22-201ENST00000472363 168 ntBASIC4.15□□□□□ -1.75
CCDC42Q96M95 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.15□□□□□ -1.75
CCDC42Q96M95 RN7SKP83-201ENST00000516512 178 ntBASIC4.15□□□□□ -1.75
CCDC42Q96M95 RN7SKP209-201ENST00000516888 304 ntBASIC4.15□□□□□ -1.75
CCDC42Q96M95 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.15□□□□□ -1.75
CCDC42Q96M95 AC008802.1-201ENST00000519121 791 ntBASIC4.15□□□□□ -1.75
CCDC42Q96M95 YPEL5P3-201ENST00000547227 352 ntBASIC4.15□□□□□ -1.75
CCDC42Q96M95 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.15□□□□□ -1.75
CCDC42Q96M95 MIR4277-201ENST00000578298 84 ntBASIC4.15□□□□□ -1.75
CCDC42Q96M95 RN7SL600P-201ENST00000581811 299 ntBASIC4.15□□□□□ -1.75
CCDC42Q96M95 MIR5096-201ENST00000583713 70 ntBASIC4.15□□□□□ -1.75
CCDC42Q96M95 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.15□□□□□ -1.75
CCDC42Q96M95 AC017076.1-201ENST00000607613 578 ntBASIC4.15□□□□□ -1.75
CCDC42Q96M95 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.15□□□□□ -1.75
CCDC42Q96M95 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.15□□□□□ -1.75
CCDC42Q96M95 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.15□□□□□ -1.75
CCDC42Q96M95 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.15□□□□□ -1.75
CCDC42Q96M95 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CCDC42Q96M95 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
CCDC42Q96M95 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC42Q96M95 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
CCDC42Q96M95 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
CCDC42Q96M95 SNORA62.2-201ENST00000364672 152 ntBASIC4.14□□□□□ -1.75
CCDC42Q96M95 AC115285.1-201ENST00000424879 736 ntBASIC4.14□□□□□ -1.75
CCDC42Q96M95 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.14□□□□□ -1.75
CCDC42Q96M95 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.14□□□□□ -1.75
CCDC42Q96M95 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.14□□□□□ -1.75
CCDC42Q96M95 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.14□□□□□ -1.75
CCDC42Q96M95 CASP3P1-201ENST00000446037 609 ntBASIC4.14□□□□□ -1.75
CCDC42Q96M95 EIF2S2P2-201ENST00000447161 982 ntBASIC4.14□□□□□ -1.75
CCDC42Q96M95 AC084198.1-201ENST00000477747 402 ntBASIC4.14□□□□□ -1.75
CCDC42Q96M95 USP9YP5-201ENST00000511770 630 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms