Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 RNA5SP498-201ENST00000411342 120 ntBASIC6.04□□□□□ -1.44
CHAMP1Q96JM3 TPMTP3-201ENST00000411928 735 ntBASIC6.04□□□□□ -1.44
CHAMP1Q96JM3 USP9YP33-201ENST00000412220 421 ntBASIC6.04□□□□□ -1.44
CHAMP1Q96JM3 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC6.04□□□□□ -1.44
CHAMP1Q96JM3 CEACAMP8-201ENST00000413902 580 ntBASIC6.04□□□□□ -1.44
CHAMP1Q96JM3 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC6.04□□□□□ -1.44
CHAMP1Q96JM3 MTND4LP11-201ENST00000422184 280 ntBASIC6.04□□□□□ -1.44
CHAMP1Q96JM3 AL009174.1-201ENST00000426577 416 ntBASIC6.04□□□□□ -1.44
CHAMP1Q96JM3 BLOC1S2P1-201ENST00000428431 301 ntBASIC6.04□□□□□ -1.44
CHAMP1Q96JM3 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC6.04□□□□□ -1.44
CHAMP1Q96JM3 CFL1P1-202ENST00000432948 411 ntBASIC6.04□□□□□ -1.44
CHAMP1Q96JM3 TRIM60P18-201ENST00000441518 828 ntBASIC6.04□□□□□ -1.44
CHAMP1Q96JM3 COX6CP2-201ENST00000444980 225 ntBASIC6.04□□□□□ -1.44
CHAMP1Q96JM3 AC104763.1-201ENST00000475274 360 ntBASIC6.04□□□□□ -1.44
CHAMP1Q96JM3 AP000797.2-201ENST00000475768 606 ntBASIC6.04□□□□□ -1.44
CHAMP1Q96JM3 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC6.04□□□□□ -1.44
CHAMP1Q96JM3 AL049874.2-201ENST00000492636 288 ntBASIC6.04□□□□□ -1.44
CHAMP1Q96JM3 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CHAMP1Q96JM3 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC6.04□□□□□ -1.44
CHAMP1Q96JM3 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC6.04□□□□□ -1.44
CHAMP1Q96JM3 SCARNA16.4-201ENST00000516956 187 ntBASIC6.04□□□□□ -1.44
CHAMP1Q96JM3 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC6.04□□□□□ -1.44
CHAMP1Q96JM3 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC6.04□□□□□ -1.44
CHAMP1Q96JM3 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC6.04□□□□□ -1.44
CHAMP1Q96JM3 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC6.04□□□□□ -1.44
CHAMP1Q96JM3 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC6.04□□□□□ -1.44
CHAMP1Q96JM3 OR4K7P-201ENST00000580232 945 ntBASIC6.04□□□□□ -1.44
CHAMP1Q96JM3 AC087683.1-201ENST00000591187 441 ntBASIC6.04□□□□□ -1.44
CHAMP1Q96JM3 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CHAMP1Q96JM3 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
CHAMP1Q96JM3 AC100827.5-201ENST00000615883 426 ntBASIC6.04□□□□□ -1.44
CHAMP1Q96JM3 AC138965.3-201ENST00000623875 498 ntBASIC6.04□□□□□ -1.44
CHAMP1Q96JM3 CU639417.4-201ENST00000623928 207 ntBASIC6.04□□□□□ -1.44
CHAMP1Q96JM3 AL356121.2-201ENST00000624715 780 ntBASIC6.04□□□□□ -1.44
CHAMP1Q96JM3 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC6.04□□□□□ -1.44
CHAMP1Q96JM3 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
CHAMP1Q96JM3 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
CHAMP1Q96JM3 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CHAMP1Q96JM3 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CHAMP1Q96JM3 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC6.04□□□□□ -1.44
CHAMP1Q96JM3 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
CHAMP1Q96JM3 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC6.04□□□□□ -1.44
CHAMP1Q96JM3 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CHAMP1Q96JM3 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
CHAMP1Q96JM3 AL672167.1-203ENST00000641299 2975 ntBASIC6.03□□□□□ -1.44
CHAMP1Q96JM3 AL138820.1-201ENST00000617901 5305 ntBASIC6.03□□□□□ -1.44
CHAMP1Q96JM3 AL137141.1-201ENST00000624622 4836 ntBASIC6.03□□□□□ -1.44
CHAMP1Q96JM3 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC6.03□□□□□ -1.44
CHAMP1Q96JM3 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
CHAMP1Q96JM3 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
CHAMP1Q96JM3 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CHAMP1Q96JM3 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CHAMP1Q96JM3 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CHAMP1Q96JM3 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CHAMP1Q96JM3 Y_RNA.359-201ENST00000365498 102 ntBASIC6.03□□□□□ -1.44
CHAMP1Q96JM3 Y_RNA.516-201ENST00000384541 124 ntBASIC6.03□□□□□ -1.44
CHAMP1Q96JM3 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
CHAMP1Q96JM3 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC6.03□□□□□ -1.44
CHAMP1Q96JM3 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC6.03□□□□□ -1.44
CHAMP1Q96JM3 AL590762.4-201ENST00000425885 253 ntBASIC6.03□□□□□ -1.44
CHAMP1Q96JM3 OFD1P13Y-201ENST00000431179 1232 ntBASIC6.03□□□□□ -1.44
CHAMP1Q96JM3 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC6.03□□□□□ -1.44
CHAMP1Q96JM3 AC002504.1-201ENST00000438281 691 ntBASIC6.03□□□□□ -1.44
CHAMP1Q96JM3 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC6.03□□□□□ -1.44
CHAMP1Q96JM3 AL357520.1-201ENST00000441557 453 ntBASIC6.03□□□□□ -1.44
CHAMP1Q96JM3 AL137845.2-201ENST00000444292 988 ntBASIC6.03□□□□□ -1.44
CHAMP1Q96JM3 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC6.03□□□□□ -1.44
CHAMP1Q96JM3 COX6CP18-201ENST00000448769 222 ntBASIC6.03□□□□□ -1.44
CHAMP1Q96JM3 AL672138.1-201ENST00000450604 1015 ntBASIC6.03□□□□□ -1.44
CHAMP1Q96JM3 RPL5P32-201ENST00000454085 879 ntBASIC6.03□□□□□ -1.44
CHAMP1Q96JM3 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC6.03□□□□□ -1.44
CHAMP1Q96JM3 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CHAMP1Q96JM3 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC6.03□□□□□ -1.44
CHAMP1Q96JM3 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CHAMP1Q96JM3 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CHAMP1Q96JM3 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC6.03□□□□□ -1.44
CHAMP1Q96JM3 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
CHAMP1Q96JM3 TBCA-207ENST00000520039 157 ntTSL 3 BASIC6.03□□□□□ -1.44
CHAMP1Q96JM3 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC6.03□□□□□ -1.44
CHAMP1Q96JM3 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC6.03□□□□□ -1.44
CHAMP1Q96JM3 AL139174.1-201ENST00000531489 886 ntBASIC6.03□□□□□ -1.44
CHAMP1Q96JM3 AC008083.2-201ENST00000546707 476 ntBASIC6.03□□□□□ -1.44
CHAMP1Q96JM3 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC6.03□□□□□ -1.44
CHAMP1Q96JM3 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC6.03□□□□□ -1.44
CHAMP1Q96JM3 AL512347.1-201ENST00000566420 503 ntBASIC6.03□□□□□ -1.44
CHAMP1Q96JM3 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
CHAMP1Q96JM3 RN7SL708P-201ENST00000580952 299 ntBASIC6.03□□□□□ -1.44
CHAMP1Q96JM3 MIR548Y-201ENST00000582739 110 ntBASIC6.03□□□□□ -1.44
CHAMP1Q96JM3 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC6.03□□□□□ -1.44
CHAMP1Q96JM3 AC008507.1-201ENST00000587506 734 ntBASIC6.03□□□□□ -1.44
CHAMP1Q96JM3 AC010678.1-201ENST00000614118 713 ntBASIC6.03□□□□□ -1.44
CHAMP1Q96JM3 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC6.03□□□□□ -1.44
CHAMP1Q96JM3 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC6.03□□□□□ -1.44
CHAMP1Q96JM3 AC127502.3-201ENST00000636170 1206 ntBASIC6.03□□□□□ -1.44
CHAMP1Q96JM3 AC068137.3-201ENST00000639191 341 ntBASIC6.03□□□□□ -1.44
CHAMP1Q96JM3 AC073869.6-201ENST00000640656 341 ntBASIC6.03□□□□□ -1.44
CHAMP1Q96JM3 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC6.03□□□□□ -1.44
CHAMP1Q96JM3 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CHAMP1Q96JM3 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CHAMP1Q96JM3 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms