Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 HIGD1AP4-201ENST00000430194 280 ntBASIC4.02□□□□□ -1.77
SHROOM3Q8TF72 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.02□□□□□ -1.77
SHROOM3Q8TF72 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SHROOM3Q8TF72 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC4.02□□□□□ -1.77
SHROOM3Q8TF72 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.02□□□□□ -1.77
SHROOM3Q8TF72 MYL12AP1-201ENST00000518490 515 ntBASIC4.02□□□□□ -1.77
SHROOM3Q8TF72 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.02□□□□□ -1.77
SHROOM3Q8TF72 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.02□□□□□ -1.77
SHROOM3Q8TF72 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC4.02□□□□□ -1.77
SHROOM3Q8TF72 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.02□□□□□ -1.77
SHROOM3Q8TF72 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.02□□□□□ -1.77
SHROOM3Q8TF72 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC4.02□□□□□ -1.77
SHROOM3Q8TF72 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SHROOM3Q8TF72 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.02□□□□□ -1.77
SHROOM3Q8TF72 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SHROOM3Q8TF72 CASC19-261ENST00000641853 1638 ntBASIC4.02□□□□□ -1.77
SHROOM3Q8TF72 NEAT1-202ENST00000501122 22743 ntBASIC4.02□□□□□ -1.77
SHROOM3Q8TF72 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.02□□□□□ -1.77
SHROOM3Q8TF72 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.02□□□□□ -1.77
SHROOM3Q8TF72 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.02□□□□□ -1.77
SHROOM3Q8TF72 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.02□□□□□ -1.77
SHROOM3Q8TF72 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.02□□□□□ -1.77
SHROOM3Q8TF72 AL049873.1-201ENST00000480540 376 ntBASIC4.02□□□□□ -1.77
SHROOM3Q8TF72 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.02□□□□□ -1.77
SHROOM3Q8TF72 AC098799.1-201ENST00000504752 800 ntBASIC4.02□□□□□ -1.77
SHROOM3Q8TF72 AC016550.3-201ENST00000515706 767 ntBASIC4.02□□□□□ -1.77
SHROOM3Q8TF72 AC022695.1-201ENST00000522089 237 ntBASIC4.02□□□□□ -1.77
SHROOM3Q8TF72 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.02□□□□□ -1.77
SHROOM3Q8TF72 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.02□□□□□ -1.77
SHROOM3Q8TF72 SNX6P1-201ENST00000601728 1224 ntBASIC4.02□□□□□ -1.77
SHROOM3Q8TF72 AL133247.2-201ENST00000603236 482 ntBASIC4.02□□□□□ -1.77
SHROOM3Q8TF72 AL451086.1-201ENST00000605596 223 ntBASIC4.02□□□□□ -1.77
SHROOM3Q8TF72 AC016957.2-201ENST00000616998 848 ntBASIC4.02□□□□□ -1.77
SHROOM3Q8TF72 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.02□□□□□ -1.77
SHROOM3Q8TF72 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.01□□□□□ -1.77
SHROOM3Q8TF72 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
SHROOM3Q8TF72 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
SHROOM3Q8TF72 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SHROOM3Q8TF72 BTBD10P1-201ENST00000549824 1352 ntBASIC4.01□□□□□ -1.77
SHROOM3Q8TF72 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
SHROOM3Q8TF72 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
SHROOM3Q8TF72 RNU4-6P-201ENST00000410804 122 ntBASIC4.01□□□□□ -1.77
SHROOM3Q8TF72 AC018644.1-201ENST00000429934 551 ntBASIC4.01□□□□□ -1.77
SHROOM3Q8TF72 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SHROOM3Q8TF72 NOTCH2P1-201ENST00000443481 624 ntBASIC4.01□□□□□ -1.77
SHROOM3Q8TF72 YWHAQP9-201ENST00000445891 512 ntBASIC4.01□□□□□ -1.77
SHROOM3Q8TF72 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SHROOM3Q8TF72 CAB39P1-201ENST00000502277 460 ntBASIC4.01□□□□□ -1.77
SHROOM3Q8TF72 IGKV2-38-201ENST00000517443 247 ntBASIC4.01□□□□□ -1.77
SHROOM3Q8TF72 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.01□□□□□ -1.77
SHROOM3Q8TF72 WDR61-205ENST00000558459 884 ntTSL 3 BASIC4.01□□□□□ -1.77
SHROOM3Q8TF72 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.01□□□□□ -1.77
SHROOM3Q8TF72 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.01□□□□□ -1.77
SHROOM3Q8TF72 AP001002.2-201ENST00000625137 386 ntBASIC4.01□□□□□ -1.77
SHROOM3Q8TF72 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.01□□□□□ -1.77
SHROOM3Q8TF72 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.01□□□□□ -1.77
SHROOM3Q8TF72 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SHROOM3Q8TF72 AC010300.1-201ENST00000600671 5134 ntBASIC4.01□□□□□ -1.77
SHROOM3Q8TF72 KPNA2P2-201ENST00000419546 1489 ntBASIC4.01□□□□□ -1.77
SHROOM3Q8TF72 AC083843.2-201ENST00000568248 6253 ntBASIC4.01□□□□□ -1.77
SHROOM3Q8TF72 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SHROOM3Q8TF72 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4□□□□□ -1.77
SHROOM3Q8TF72 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SHROOM3Q8TF72 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4□□□□□ -1.77
SHROOM3Q8TF72 AC020633.1-201ENST00000468439 2247 ntBASIC4□□□□□ -1.77
SHROOM3Q8TF72 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4□□□□□ -1.77
SHROOM3Q8TF72 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
SHROOM3Q8TF72 RPL7P4-203ENST00000430239 730 ntBASIC4□□□□□ -1.77
SHROOM3Q8TF72 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4□□□□□ -1.77
SHROOM3Q8TF72 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4□□□□□ -1.77
SHROOM3Q8TF72 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4□□□□□ -1.77
SHROOM3Q8TF72 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4□□□□□ -1.77
SHROOM3Q8TF72 RPL23AP12-201ENST00000467573 473 ntBASIC4□□□□□ -1.77
SHROOM3Q8TF72 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4□□□□□ -1.77
SHROOM3Q8TF72 RNA5SP154-201ENST00000516193 111 ntBASIC4□□□□□ -1.77
SHROOM3Q8TF72 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4□□□□□ -1.77
SHROOM3Q8TF72 AC006971.1-201ENST00000407916 4486 ntBASIC4□□□□□ -1.77
SHROOM3Q8TF72 AP002001.2-201ENST00000529025 1469 ntBASIC4□□□□□ -1.77
SHROOM3Q8TF72 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SHROOM3Q8TF72 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SHROOM3Q8TF72 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
SHROOM3Q8TF72 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
SHROOM3Q8TF72 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
SHROOM3Q8TF72 SOD2P1-201ENST00000396543 562 ntBASIC4□□□□□ -1.77
SHROOM3Q8TF72 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4□□□□□ -1.77
SHROOM3Q8TF72 AC236972.1-201ENST00000433225 199 ntBASIC4□□□□□ -1.77
SHROOM3Q8TF72 TPTE2P3-201ENST00000441562 1189 ntBASIC4□□□□□ -1.77
SHROOM3Q8TF72 RPL6P9-201ENST00000466502 859 ntBASIC4□□□□□ -1.77
SHROOM3Q8TF72 UBE2DNL-203ENST00000474922 222 ntBASIC4□□□□□ -1.77
SHROOM3Q8TF72 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4□□□□□ -1.77
SHROOM3Q8TF72 SOD1P3-201ENST00000518682 454 ntBASIC4□□□□□ -1.77
SHROOM3Q8TF72 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC4□□□□□ -1.77
SHROOM3Q8TF72 TRAV15-201ENST00000556680 249 ntBASIC4□□□□□ -1.77
SHROOM3Q8TF72 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC4□□□□□ -1.77
SHROOM3Q8TF72 AC233280.2-201ENST00000603917 1070 ntBASIC4□□□□□ -1.77
SHROOM3Q8TF72 AC096553.1-201ENST00000605169 829 ntBASIC4□□□□□ -1.77
SHROOM3Q8TF72 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC4□□□□□ -1.77
SHROOM3Q8TF72 AC009093.8-201ENST00000641769 292 ntBASIC4□□□□□ -1.77
SHROOM3Q8TF72 MAPK10-372ENST00000641954 3413 ntBASIC3.99□□□□□ -1.77
SHROOM3Q8TF72 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms