Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 AF228730.2-201ENST00000438784 848 ntBASIC3.18□□□□□ -1.9
TTC9CQ8N5M4 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC3.18□□□□□ -1.9
TTC9CQ8N5M4 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.18□□□□□ -1.9
TTC9CQ8N5M4 AL136097.1-201ENST00000456945 913 ntBASIC3.18□□□□□ -1.9
TTC9CQ8N5M4 RNU7-170P-201ENST00000459303 61 ntBASIC3.18□□□□□ -1.9
TTC9CQ8N5M4 AC087385.1-201ENST00000475062 312 ntBASIC3.18□□□□□ -1.9
TTC9CQ8N5M4 RPL7P47-201ENST00000497299 556 ntBASIC3.18□□□□□ -1.9
TTC9CQ8N5M4 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC3.18□□□□□ -1.9
TTC9CQ8N5M4 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.18□□□□□ -1.9
TTC9CQ8N5M4 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.18□□□□□ -1.9
TTC9CQ8N5M4 CYCSP29-201ENST00000533731 318 ntBASIC3.18□□□□□ -1.9
TTC9CQ8N5M4 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC3.18□□□□□ -1.9
TTC9CQ8N5M4 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.18□□□□□ -1.9
TTC9CQ8N5M4 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC3.18□□□□□ -1.9
TTC9CQ8N5M4 GNRHR2P1-201ENST00000555315 631 ntBASIC3.18□□□□□ -1.9
TTC9CQ8N5M4 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC3.18□□□□□ -1.9
TTC9CQ8N5M4 AC023575.1-201ENST00000580510 358 ntBASIC3.18□□□□□ -1.9
TTC9CQ8N5M4 RN7SL600P-201ENST00000581811 299 ntBASIC3.18□□□□□ -1.9
TTC9CQ8N5M4 AC011477.5-201ENST00000586571 259 ntBASIC3.18□□□□□ -1.9
TTC9CQ8N5M4 AC068020.1-201ENST00000594215 661 ntBASIC3.18□□□□□ -1.9
TTC9CQ8N5M4 AL023583.1-201ENST00000607518 1143 ntBASIC3.18□□□□□ -1.9
TTC9CQ8N5M4 AP000255.1-201ENST00000610276 676 ntBASIC3.18□□□□□ -1.9
TTC9CQ8N5M4 AC023043.4-201ENST00000612081 449 ntBASIC3.18□□□□□ -1.9
TTC9CQ8N5M4 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.18□□□□□ -1.9
TTC9CQ8N5M4 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.18□□□□□ -1.9
TTC9CQ8N5M4 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC3.18□□□□□ -1.9
TTC9CQ8N5M4 AC015722.2-201ENST00000622210 551 ntBASIC3.18□□□□□ -1.9
TTC9CQ8N5M4 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
TTC9CQ8N5M4 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.18□□□□□ -1.9
TTC9CQ8N5M4 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.18□□□□□ -1.9
TTC9CQ8N5M4 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
TTC9CQ8N5M4 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
TTC9CQ8N5M4 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
TTC9CQ8N5M4 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
TTC9CQ8N5M4 CR382285.2-201ENST00000624662 1495 ntBASIC3.17□□□□□ -1.9
TTC9CQ8N5M4 BX005019.1-201ENST00000561881 1810 ntBASIC3.17□□□□□ -1.9
TTC9CQ8N5M4 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.17□□□□□ -1.9
TTC9CQ8N5M4 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
TTC9CQ8N5M4 RNU11-4P-201ENST00000391149 133 ntBASIC3.17□□□□□ -1.9
TTC9CQ8N5M4 AC104297.1-201ENST00000393779 870 ntBASIC3.17□□□□□ -1.9
TTC9CQ8N5M4 HMGB3P19-201ENST00000403971 560 ntBASIC3.17□□□□□ -1.9
TTC9CQ8N5M4 RPL5P19-201ENST00000404228 893 ntBASIC3.17□□□□□ -1.9
TTC9CQ8N5M4 TPT1P2-201ENST00000413105 503 ntBASIC3.17□□□□□ -1.9
TTC9CQ8N5M4 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
TTC9CQ8N5M4 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC3.17□□□□□ -1.9
TTC9CQ8N5M4 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC3.17□□□□□ -1.9
TTC9CQ8N5M4 VN1R25P-201ENST00000443385 738 ntBASIC3.17□□□□□ -1.9
TTC9CQ8N5M4 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.17□□□□□ -1.9
TTC9CQ8N5M4 VN1R40P-201ENST00000455196 941 ntBASIC3.17□□□□□ -1.9
TTC9CQ8N5M4 AC010618.1-201ENST00000469924 477 ntBASIC3.17□□□□□ -1.9
TTC9CQ8N5M4 RN7SL860P-201ENST00000473738 223 ntBASIC3.17□□□□□ -1.9
TTC9CQ8N5M4 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.17□□□□□ -1.9
TTC9CQ8N5M4 RPL31P61-201ENST00000496160 376 ntBASIC3.17□□□□□ -1.9
TTC9CQ8N5M4 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC3.17□□□□□ -1.9
TTC9CQ8N5M4 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.17□□□□□ -1.9
TTC9CQ8N5M4 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.17□□□□□ -1.9
TTC9CQ8N5M4 AC091516.1-201ENST00000549191 703 ntBASIC3.17□□□□□ -1.9
TTC9CQ8N5M4 MIR3939-201ENST00000582614 106 ntBASIC3.17□□□□□ -1.9
TTC9CQ8N5M4 KPNA2P3-201ENST00000584190 848 ntBASIC3.17□□□□□ -1.9
TTC9CQ8N5M4 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.17□□□□□ -1.9
TTC9CQ8N5M4 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.17□□□□□ -1.9
TTC9CQ8N5M4 Z82195.1-201ENST00000604558 398 ntBASIC3.17□□□□□ -1.9
TTC9CQ8N5M4 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.17□□□□□ -1.9
TTC9CQ8N5M4 AL445423.1-201ENST00000609941 536 ntBASIC3.17□□□□□ -1.9
TTC9CQ8N5M4 AC005962.2-201ENST00000611427 652 ntBASIC3.17□□□□□ -1.9
TTC9CQ8N5M4 MLECP1-201ENST00000615893 709 ntBASIC3.17□□□□□ -1.9
TTC9CQ8N5M4 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.17□□□□□ -1.9
TTC9CQ8N5M4 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC3.17□□□□□ -1.9
TTC9CQ8N5M4 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
TTC9CQ8N5M4 AL136964.1-201ENST00000622038 2990 ntBASIC3.17□□□□□ -1.9
TTC9CQ8N5M4 ZNF962P-201ENST00000443465 3140 ntBASIC3.17□□□□□ -1.9
TTC9CQ8N5M4 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
TTC9CQ8N5M4 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.17□□□□□ -1.9
TTC9CQ8N5M4 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
TTC9CQ8N5M4 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
TTC9CQ8N5M4 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.16□□□□□ -1.9
TTC9CQ8N5M4 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
TTC9CQ8N5M4 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.16□□□□□ -1.9
TTC9CQ8N5M4 SNORD6-201ENST00000365444 73 ntBASIC3.16□□□□□ -1.9
TTC9CQ8N5M4 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.16□□□□□ -1.9
TTC9CQ8N5M4 SNORA56-201ENST00000383966 129 ntBASIC3.16□□□□□ -1.9
TTC9CQ8N5M4 ST13P16-201ENST00000401760 781 ntBASIC3.16□□□□□ -1.9
TTC9CQ8N5M4 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
TTC9CQ8N5M4 AL807761.1-201ENST00000417622 171 ntBASIC3.16□□□□□ -1.9
TTC9CQ8N5M4 MTND4LP13-201ENST00000425022 298 ntBASIC3.16□□□□□ -1.9
TTC9CQ8N5M4 OR5BE1P-201ENST00000425977 939 ntBASIC3.16□□□□□ -1.9
TTC9CQ8N5M4 AC016712.1-201ENST00000431088 378 ntBASIC3.16□□□□□ -1.9
TTC9CQ8N5M4 AC011742.1-201ENST00000431448 434 ntBASIC3.16□□□□□ -1.9
TTC9CQ8N5M4 ATP5HP2-201ENST00000433885 485 ntBASIC3.16□□□□□ -1.9
TTC9CQ8N5M4 AC096638.2-201ENST00000434965 711 ntBASIC3.16□□□□□ -1.9
TTC9CQ8N5M4 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC3.16□□□□□ -1.9
TTC9CQ8N5M4 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.16□□□□□ -1.9
TTC9CQ8N5M4 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
TTC9CQ8N5M4 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.16□□□□□ -1.9
TTC9CQ8N5M4 SNORA31.9-201ENST00000516429 84 ntBASIC3.16□□□□□ -1.9
TTC9CQ8N5M4 NARSP2-201ENST00000518524 679 ntBASIC3.16□□□□□ -1.9
TTC9CQ8N5M4 MRPL49P2-201ENST00000521066 465 ntBASIC3.16□□□□□ -1.9
TTC9CQ8N5M4 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC3.16□□□□□ -1.9
TTC9CQ8N5M4 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.16□□□□□ -1.9
TTC9CQ8N5M4 AC138701.1-201ENST00000524329 714 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms