Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.22□□□□□ -1.57
SLC44A3Q8N4M1 AC022360.1-201ENST00000521058 340 ntBASIC5.22□□□□□ -1.57
SLC44A3Q8N4M1 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC5.22□□□□□ -1.57
SLC44A3Q8N4M1 AC138832.1-201ENST00000522871 556 ntBASIC5.22□□□□□ -1.57
SLC44A3Q8N4M1 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.22□□□□□ -1.57
SLC44A3Q8N4M1 NAP1L1P1-201ENST00000524793 1063 ntBASIC5.22□□□□□ -1.57
SLC44A3Q8N4M1 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.22□□□□□ -1.57
SLC44A3Q8N4M1 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
SLC44A3Q8N4M1 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.22□□□□□ -1.57
SLC44A3Q8N4M1 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC5.22□□□□□ -1.57
SLC44A3Q8N4M1 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.22□□□□□ -1.57
SLC44A3Q8N4M1 ISCA1P3-201ENST00000577104 373 ntBASIC5.22□□□□□ -1.57
SLC44A3Q8N4M1 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC5.22□□□□□ -1.57
SLC44A3Q8N4M1 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SLC44A3Q8N4M1 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC5.22□□□□□ -1.57
SLC44A3Q8N4M1 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC5.22□□□□□ -1.57
SLC44A3Q8N4M1 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC5.22□□□□□ -1.57
SLC44A3Q8N4M1 AC018618.2-201ENST00000604770 446 ntBASIC5.22□□□□□ -1.57
SLC44A3Q8N4M1 AC099842.1-201ENST00000619919 596 ntBASIC5.22□□□□□ -1.57
SLC44A3Q8N4M1 PDCD6IPP1-202ENST00000622242 1064 ntBASIC5.22□□□□□ -1.57
SLC44A3Q8N4M1 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC5.22□□□□□ -1.57
SLC44A3Q8N4M1 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
SLC44A3Q8N4M1 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
SLC44A3Q8N4M1 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SLC44A3Q8N4M1 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SLC44A3Q8N4M1 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SLC44A3Q8N4M1 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.22□□□□□ -1.57
SLC44A3Q8N4M1 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.22□□□□□ -1.57
SLC44A3Q8N4M1 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SLC44A3Q8N4M1 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SLC44A3Q8N4M1 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.22□□□□□ -1.57
SLC44A3Q8N4M1 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
SLC44A3Q8N4M1 MAPK10-263ENST00000641052 4307 ntBASIC5.21□□□□□ -1.57
SLC44A3Q8N4M1 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
SLC44A3Q8N4M1 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.21□□□□□ -1.57
SLC44A3Q8N4M1 AP000776.1-201ENST00000530032 1663 ntBASIC5.21□□□□□ -1.57
SLC44A3Q8N4M1 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.21□□□□□ -1.58
SLC44A3Q8N4M1 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
SLC44A3Q8N4M1 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.21□□□□□ -1.58
SLC44A3Q8N4M1 RNA5SP27-201ENST00000363839 119 ntBASIC5.21□□□□□ -1.58
SLC44A3Q8N4M1 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
SLC44A3Q8N4M1 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SLC44A3Q8N4M1 AL031577.2-201ENST00000404133 280 ntBASIC5.21□□□□□ -1.58
SLC44A3Q8N4M1 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC5.21□□□□□ -1.58
SLC44A3Q8N4M1 AC006065.1-201ENST00000422539 802 ntBASIC5.21□□□□□ -1.58
SLC44A3Q8N4M1 AC012519.1-201ENST00000424588 610 ntBASIC5.21□□□□□ -1.58
SLC44A3Q8N4M1 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC5.21□□□□□ -1.58
SLC44A3Q8N4M1 HMGN2P27-201ENST00000427352 270 ntBASIC5.21□□□□□ -1.58
SLC44A3Q8N4M1 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.21□□□□□ -1.58
SLC44A3Q8N4M1 CCNB1IP1P2-201ENST00000432876 818 ntBASIC5.21□□□□□ -1.58
SLC44A3Q8N4M1 GTF3AP5-201ENST00000442645 697 ntBASIC5.21□□□□□ -1.58
SLC44A3Q8N4M1 MTCO1P19-201ENST00000443487 500 ntBASIC5.21□□□□□ -1.58
SLC44A3Q8N4M1 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SLC44A3Q8N4M1 AP000936.2-201ENST00000447151 681 ntBASIC5.21□□□□□ -1.58
SLC44A3Q8N4M1 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC5.21□□□□□ -1.58
SLC44A3Q8N4M1 MTCYBP1-201ENST00000454315 1119 ntBASIC5.21□□□□□ -1.58
SLC44A3Q8N4M1 RN7SL443P-201ENST00000464331 290 ntBASIC5.21□□□□□ -1.58
SLC44A3Q8N4M1 SETP11-201ENST00000473027 690 ntBASIC5.21□□□□□ -1.58
SLC44A3Q8N4M1 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SLC44A3Q8N4M1 AC084024.2-201ENST00000503480 791 ntBASIC5.21□□□□□ -1.58
SLC44A3Q8N4M1 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.21□□□□□ -1.58
SLC44A3Q8N4M1 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.21□□□□□ -1.58
SLC44A3Q8N4M1 AC111000.3-201ENST00000508057 576 ntBASIC5.21□□□□□ -1.58
SLC44A3Q8N4M1 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.21□□□□□ -1.58
SLC44A3Q8N4M1 RNU2-30P-201ENST00000516209 141 ntBASIC5.21□□□□□ -1.58
SLC44A3Q8N4M1 snoZ278.1-201ENST00000517059 112 ntBASIC5.21□□□□□ -1.58
SLC44A3Q8N4M1 AC009643.1-201ENST00000532030 391 ntBASIC5.21□□□□□ -1.58
SLC44A3Q8N4M1 AL121766.1-201ENST00000547436 487 ntBASIC5.21□□□□□ -1.58
SLC44A3Q8N4M1 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.21□□□□□ -1.58
SLC44A3Q8N4M1 CASC16-202ENST00000563844 610 ntTSL 3 BASIC5.21□□□□□ -1.58
SLC44A3Q8N4M1 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.21□□□□□ -1.58
SLC44A3Q8N4M1 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC5.21□□□□□ -1.58
SLC44A3Q8N4M1 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.21□□□□□ -1.58
SLC44A3Q8N4M1 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC5.21□□□□□ -1.58
SLC44A3Q8N4M1 AC068020.1-201ENST00000594215 661 ntBASIC5.21□□□□□ -1.58
SLC44A3Q8N4M1 AC073544.2-201ENST00000601155 540 ntBASIC5.21□□□□□ -1.58
SLC44A3Q8N4M1 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.21□□□□□ -1.58
SLC44A3Q8N4M1 AF131215.7-201ENST00000602443 707 ntBASIC5.21□□□□□ -1.58
SLC44A3Q8N4M1 AC130352.1-201ENST00000602979 661 ntBASIC5.21□□□□□ -1.58
SLC44A3Q8N4M1 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC5.21□□□□□ -1.58
SLC44A3Q8N4M1 AL139286.2-201ENST00000606838 396 ntBASIC5.21□□□□□ -1.58
SLC44A3Q8N4M1 AL139124.1-201ENST00000609123 421 ntBASIC5.21□□□□□ -1.58
SLC44A3Q8N4M1 AL603839.4-201ENST00000624658 1005 ntBASIC5.21□□□□□ -1.58
SLC44A3Q8N4M1 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.21□□□□□ -1.58
SLC44A3Q8N4M1 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SLC44A3Q8N4M1 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SLC44A3Q8N4M1 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SLC44A3Q8N4M1 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.21□□□□□ -1.58
SLC44A3Q8N4M1 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.58
SLC44A3Q8N4M1 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
SLC44A3Q8N4M1 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
SLC44A3Q8N4M1 SPATA2P1-201ENST00000431223 2055 ntBASIC5.2□□□□□ -1.58
SLC44A3Q8N4M1 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.2□□□□□ -1.58
SLC44A3Q8N4M1 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
SLC44A3Q8N4M1 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SLC44A3Q8N4M1 AC099654.2-201ENST00000433031 1980 ntBASIC5.2□□□□□ -1.58
SLC44A3Q8N4M1 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.2□□□□□ -1.58
SLC44A3Q8N4M1 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SLC44A3Q8N4M1 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SLC44A3Q8N4M1 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms