Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SYNPOQ8N3V7 RNU4-21P-201ENST00000362802 126 ntBASIC5.69□□□□□ -1.5
SYNPOQ8N3V7 RNA5SP335-201ENST00000363817 110 ntBASIC5.69□□□□□ -1.5
SYNPOQ8N3V7 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SYNPOQ8N3V7 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SYNPOQ8N3V7 OR5H15-201ENST00000383696 930 ntBASIC5.69□□□□□ -1.5
SYNPOQ8N3V7 RPL31-204ENST00000409038 817 ntTSL 2 BASIC5.69□□□□□ -1.5
SYNPOQ8N3V7 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.69□□□□□ -1.5
SYNPOQ8N3V7 HMGB1P11-201ENST00000413899 637 ntBASIC5.69□□□□□ -1.5
SYNPOQ8N3V7 AL049610.1-201ENST00000423374 372 ntBASIC5.69□□□□□ -1.5
SYNPOQ8N3V7 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SYNPOQ8N3V7 AC124944.2-201ENST00000429866 1242 ntBASIC5.69□□□□□ -1.5
SYNPOQ8N3V7 AC096638.2-201ENST00000434965 711 ntBASIC5.69□□□□□ -1.5
SYNPOQ8N3V7 OR6D1P-201ENST00000436165 939 ntBASIC5.69□□□□□ -1.5
SYNPOQ8N3V7 LARP1BP3-201ENST00000437229 869 ntBASIC5.69□□□□□ -1.5
SYNPOQ8N3V7 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC5.69□□□□□ -1.5
SYNPOQ8N3V7 TCEA1P3-201ENST00000443005 880 ntBASIC5.69□□□□□ -1.5
SYNPOQ8N3V7 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC5.69□□□□□ -1.5
SYNPOQ8N3V7 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SYNPOQ8N3V7 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC5.69□□□□□ -1.5
SYNPOQ8N3V7 SNRPCP2-201ENST00000504370 475 ntBASIC5.69□□□□□ -1.5
SYNPOQ8N3V7 LAMTOR3P2-201ENST00000504479 232 ntBASIC5.69□□□□□ -1.5
SYNPOQ8N3V7 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC5.69□□□□□ -1.5
SYNPOQ8N3V7 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC5.69□□□□□ -1.5
SYNPOQ8N3V7 snoU109.5-201ENST00000516231 132 ntBASIC5.69□□□□□ -1.5
SYNPOQ8N3V7 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SYNPOQ8N3V7 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC5.69□□□□□ -1.5
SYNPOQ8N3V7 RFPL1S-203ENST00000539579 330 ntBASIC5.69□□□□□ -1.5
SYNPOQ8N3V7 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SYNPOQ8N3V7 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC5.69□□□□□ -1.5
SYNPOQ8N3V7 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC5.69□□□□□ -1.5
SYNPOQ8N3V7 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC5.69□□□□□ -1.5
SYNPOQ8N3V7 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.69□□□□□ -1.5
SYNPOQ8N3V7 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC5.69□□□□□ -1.5
SYNPOQ8N3V7 AC006115.2-201ENST00000596823 202 ntBASIC5.69□□□□□ -1.5
SYNPOQ8N3V7 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SYNPOQ8N3V7 AC005191.1-201ENST00000603950 358 ntBASIC5.69□□□□□ -1.5
SYNPOQ8N3V7 AC115286.1-201ENST00000604298 434 ntBASIC5.69□□□□□ -1.5
SYNPOQ8N3V7 AC103710.4-201ENST00000609301 899 ntBASIC5.69□□□□□ -1.5
SYNPOQ8N3V7 AL133243.1-201ENST00000614487 366 ntBASIC5.69□□□□□ -1.5
SYNPOQ8N3V7 AC015712.7-201ENST00000615211 635 ntBASIC5.69□□□□□ -1.5
SYNPOQ8N3V7 AL031658.2-201ENST00000616850 651 ntBASIC5.69□□□□□ -1.5
SYNPOQ8N3V7 AC068722.2-201ENST00000618734 544 ntBASIC5.69□□□□□ -1.5
SYNPOQ8N3V7 AC026585.1-201ENST00000619582 524 ntBASIC5.69□□□□□ -1.5
SYNPOQ8N3V7 AC009878.1-201ENST00000621819 340 ntBASIC5.69□□□□□ -1.5
SYNPOQ8N3V7 AC074101.1-201ENST00000637861 241 ntBASIC5.69□□□□□ -1.5
SYNPOQ8N3V7 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.69□□□□□ -1.5
SYNPOQ8N3V7 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SYNPOQ8N3V7 AC015799.1-201ENST00000622996 3122 ntBASIC5.69□□□□□ -1.5
SYNPOQ8N3V7 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SYNPOQ8N3V7 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.69□□□□□ -1.5
SYNPOQ8N3V7 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
SYNPOQ8N3V7 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SYNPOQ8N3V7 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SYNPOQ8N3V7 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.68□□□□□ -1.5
SYNPOQ8N3V7 AL031985.3-201ENST00000565390 2449 ntBASIC5.68□□□□□ -1.5
SYNPOQ8N3V7 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SYNPOQ8N3V7 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
SYNPOQ8N3V7 AC103591.2-201ENST00000265259 766 ntBASIC5.68□□□□□ -1.5
SYNPOQ8N3V7 RNU6-501P-201ENST00000364072 100 ntBASIC5.68□□□□□ -1.5
SYNPOQ8N3V7 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SYNPOQ8N3V7 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
SYNPOQ8N3V7 RNY3P10-201ENST00000384764 102 ntBASIC5.68□□□□□ -1.5
SYNPOQ8N3V7 MIR130A-201ENST00000385274 89 ntBASIC5.68□□□□□ -1.5
SYNPOQ8N3V7 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
SYNPOQ8N3V7 RN7SKP216-201ENST00000411050 312 ntBASIC5.68□□□□□ -1.5
SYNPOQ8N3V7 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC5.68□□□□□ -1.5
SYNPOQ8N3V7 OR6C64P-201ENST00000419708 825 ntBASIC5.68□□□□□ -1.5
SYNPOQ8N3V7 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.68□□□□□ -1.5
SYNPOQ8N3V7 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.68□□□□□ -1.5
SYNPOQ8N3V7 AL512286.1-201ENST00000439244 400 ntBASIC5.68□□□□□ -1.5
SYNPOQ8N3V7 UBE2V1P3-201ENST00000439651 417 ntBASIC5.68□□□□□ -1.5
SYNPOQ8N3V7 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.68□□□□□ -1.5
SYNPOQ8N3V7 COX6CP12-201ENST00000446748 202 ntBASIC5.68□□□□□ -1.5
SYNPOQ8N3V7 AC105399.1-202ENST00000447303 205 ntBASIC5.68□□□□□ -1.5
SYNPOQ8N3V7 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SYNPOQ8N3V7 VN1R32P-201ENST00000452234 905 ntBASIC5.68□□□□□ -1.5
SYNPOQ8N3V7 MEMO1P4-201ENST00000453590 386 ntBASIC5.68□□□□□ -1.5
SYNPOQ8N3V7 AC004129.2-201ENST00000457229 287 ntBASIC5.68□□□□□ -1.5
SYNPOQ8N3V7 AC017015.1-201ENST00000477387 286 ntBASIC5.68□□□□□ -1.5
SYNPOQ8N3V7 AC005726.1-201ENST00000494679 427 ntBASIC5.68□□□□□ -1.5
SYNPOQ8N3V7 RN7SL808P-201ENST00000496066 299 ntBASIC5.68□□□□□ -1.5
SYNPOQ8N3V7 RN7SKP66-201ENST00000516681 231 ntBASIC5.68□□□□□ -1.5
SYNPOQ8N3V7 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.68□□□□□ -1.5
SYNPOQ8N3V7 AC090424.1-201ENST00000535243 736 ntBASIC5.68□□□□□ -1.5
SYNPOQ8N3V7 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.68□□□□□ -1.5
SYNPOQ8N3V7 AL133457.1-201ENST00000564251 987 ntBASIC5.68□□□□□ -1.5
SYNPOQ8N3V7 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.68□□□□□ -1.5
SYNPOQ8N3V7 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.68□□□□□ -1.5
SYNPOQ8N3V7 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC5.68□□□□□ -1.5
SYNPOQ8N3V7 AC104785.1-201ENST00000603220 588 ntBASIC5.68□□□□□ -1.5
SYNPOQ8N3V7 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.68□□□□□ -1.5
SYNPOQ8N3V7 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.68□□□□□ -1.5
SYNPOQ8N3V7 AL359715.5-201ENST00000623431 443 ntBASIC5.68□□□□□ -1.5
SYNPOQ8N3V7 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.68□□□□□ -1.5
SYNPOQ8N3V7 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC5.68□□□□□ -1.5
SYNPOQ8N3V7 AC000095.2-202ENST00000637415 154 ntBASIC5.68□□□□□ -1.5
SYNPOQ8N3V7 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SYNPOQ8N3V7 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.68□□□□□ -1.5
SYNPOQ8N3V7 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms