Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC5.81□□□□□ -1.48
VPS8Q8N3P4 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
VPS8Q8N3P4 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
VPS8Q8N3P4 AP001284.1-201ENST00000528393 2118 ntBASIC5.81□□□□□ -1.48
VPS8Q8N3P4 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.81□□□□□ -1.48
VPS8Q8N3P4 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
VPS8Q8N3P4 MIR448-201ENST00000362131 111 ntBASIC5.81□□□□□ -1.48
VPS8Q8N3P4 5S_rRNA.1-201ENST00000364415 116 ntBASIC5.81□□□□□ -1.48
VPS8Q8N3P4 SNORA62.3-201ENST00000365110 153 ntBASIC5.81□□□□□ -1.48
VPS8Q8N3P4 ESD-201ENST00000378697 1079 ntTSL 5 BASIC5.81□□□□□ -1.48
VPS8Q8N3P4 VN1R34P-201ENST00000447387 883 ntBASIC5.81□□□□□ -1.48
VPS8Q8N3P4 AL451050.1-201ENST00000450126 415 ntBASIC5.81□□□□□ -1.48
VPS8Q8N3P4 SUN3-208ENST00000453192 801 ntTSL 5 BASIC5.81□□□□□ -1.48
VPS8Q8N3P4 HMGN1P15-201ENST00000513870 295 ntBASIC5.81□□□□□ -1.48
VPS8Q8N3P4 SETP1-201ENST00000556014 845 ntBASIC5.81□□□□□ -1.48
VPS8Q8N3P4 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC5.81□□□□□ -1.48
VPS8Q8N3P4 AP003400.2-201ENST00000624036 666 ntBASIC5.81□□□□□ -1.48
VPS8Q8N3P4 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC5.81□□□□□ -1.48
VPS8Q8N3P4 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.81□□□□□ -1.48
VPS8Q8N3P4 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
VPS8Q8N3P4 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC5.81□□□□□ -1.48
VPS8Q8N3P4 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
VPS8Q8N3P4 AL355596.1-201ENST00000565399 3996 ntBASIC5.8□□□□□ -1.48
VPS8Q8N3P4 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC5.8□□□□□ -1.48
VPS8Q8N3P4 AC018555.1-201ENST00000567548 1980 ntBASIC5.8□□□□□ -1.48
VPS8Q8N3P4 SNORD9-201ENST00000362566 104 ntBASIC5.8□□□□□ -1.48
VPS8Q8N3P4 PTMAP2-201ENST00000397627 327 ntBASIC5.8□□□□□ -1.48
VPS8Q8N3P4 HMGB3P20-201ENST00000417997 600 ntBASIC5.8□□□□□ -1.48
VPS8Q8N3P4 AC069157.1-201ENST00000421749 137 ntBASIC5.8□□□□□ -1.48
VPS8Q8N3P4 USP12PY-201ENST00000427677 1064 ntBASIC5.8□□□□□ -1.48
VPS8Q8N3P4 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC5.8□□□□□ -1.48
VPS8Q8N3P4 MOB1AP1-201ENST00000430903 535 ntBASIC5.8□□□□□ -1.48
VPS8Q8N3P4 GOT2P5-201ENST00000433995 546 ntBASIC5.8□□□□□ -1.48
VPS8Q8N3P4 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC5.8□□□□□ -1.48
VPS8Q8N3P4 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.8□□□□□ -1.48
VPS8Q8N3P4 AC073387.1-201ENST00000453261 709 ntBASIC5.8□□□□□ -1.48
VPS8Q8N3P4 RPL7L1P8-201ENST00000469911 741 ntBASIC5.8□□□□□ -1.48
VPS8Q8N3P4 AC069499.1-201ENST00000489433 509 ntBASIC5.8□□□□□ -1.48
VPS8Q8N3P4 UBA52P3-201ENST00000491303 382 ntBASIC5.8□□□□□ -1.48
VPS8Q8N3P4 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC5.8□□□□□ -1.48
VPS8Q8N3P4 RN7SKP209-201ENST00000516888 304 ntBASIC5.8□□□□□ -1.48
VPS8Q8N3P4 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC5.8□□□□□ -1.48
VPS8Q8N3P4 MIR6075-201ENST00000620782 95 ntBASIC5.8□□□□□ -1.48
VPS8Q8N3P4 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
VPS8Q8N3P4 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
VPS8Q8N3P4 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.8□□□□□ -1.48
VPS8Q8N3P4 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
VPS8Q8N3P4 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
VPS8Q8N3P4 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
VPS8Q8N3P4 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
VPS8Q8N3P4 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
VPS8Q8N3P4 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC5.79□□□□□ -1.48
VPS8Q8N3P4 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
VPS8Q8N3P4 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
VPS8Q8N3P4 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC5.79□□□□□ -1.48
VPS8Q8N3P4 AL356535.1-201ENST00000440335 398 ntBASIC5.79□□□□□ -1.48
VPS8Q8N3P4 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC5.79□□□□□ -1.48
VPS8Q8N3P4 CDH12P2-201ENST00000504393 298 ntBASIC5.79□□□□□ -1.48
VPS8Q8N3P4 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
VPS8Q8N3P4 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC5.79□□□□□ -1.48
VPS8Q8N3P4 SNORA70.18-201ENST00000516696 98 ntBASIC5.79□□□□□ -1.48
VPS8Q8N3P4 OR1AB1P-201ENST00000585564 761 ntBASIC5.79□□□□□ -1.48
VPS8Q8N3P4 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC5.79□□□□□ -1.48
VPS8Q8N3P4 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC5.79□□□□□ -1.48
VPS8Q8N3P4 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
VPS8Q8N3P4 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
VPS8Q8N3P4 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
VPS8Q8N3P4 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
VPS8Q8N3P4 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC5.78□□□□□ -1.48
VPS8Q8N3P4 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
VPS8Q8N3P4 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
VPS8Q8N3P4 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
VPS8Q8N3P4 MIR449B-201ENST00000384995 97 ntBASIC5.78□□□□□ -1.48
VPS8Q8N3P4 AC233289.1-201ENST00000403700 508 ntBASIC5.78□□□□□ -1.48
VPS8Q8N3P4 AL121834.1-202ENST00000404494 277 ntBASIC5.78□□□□□ -1.48
VPS8Q8N3P4 OR52Y1P-201ENST00000452418 828 ntBASIC5.78□□□□□ -1.48
VPS8Q8N3P4 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC5.78□□□□□ -1.48
VPS8Q8N3P4 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC5.78□□□□□ -1.48
VPS8Q8N3P4 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC5.78□□□□□ -1.48
VPS8Q8N3P4 AC092747.2-201ENST00000545069 983 ntBASIC5.78□□□□□ -1.48
VPS8Q8N3P4 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
VPS8Q8N3P4 EIF1P6-201ENST00000600054 334 ntBASIC5.78□□□□□ -1.48
VPS8Q8N3P4 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
VPS8Q8N3P4 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
VPS8Q8N3P4 DLEU1_1.1-201ENST00000618107 190 ntBASIC5.78□□□□□ -1.48
VPS8Q8N3P4 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.78□□□□□ -1.48
VPS8Q8N3P4 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
VPS8Q8N3P4 AL078595.2-201ENST00000605309 1780 ntBASIC5.78□□□□□ -1.48
VPS8Q8N3P4 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
VPS8Q8N3P4 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.78□□□□□ -1.48
VPS8Q8N3P4 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
VPS8Q8N3P4 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
VPS8Q8N3P4 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
VPS8Q8N3P4 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
VPS8Q8N3P4 AL035423.1-201ENST00000420331 213 ntBASIC5.77□□□□□ -1.49
VPS8Q8N3P4 SDCBPP2-201ENST00000424643 885 ntBASIC5.77□□□□□ -1.49
VPS8Q8N3P4 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC5.77□□□□□ -1.49
VPS8Q8N3P4 IFNNP1-201ENST00000429219 553 ntBASIC5.77□□□□□ -1.49
VPS8Q8N3P4 AC092447.2-201ENST00000435487 669 ntBASIC5.77□□□□□ -1.49
VPS8Q8N3P4 AC091564.1-201ENST00000464563 479 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms