Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 BNIP3P31-201ENST00000604515 566 ntBASIC3.33□□□□□ -1.88
LINC01561Q8N1V8 IGHV3-29-201ENST00000604817 344 ntBASIC3.33□□□□□ -1.88
LINC01561Q8N1V8 IGKV2OR2-2-201ENST00000605025 300 ntBASIC3.33□□□□□ -1.88
LINC01561Q8N1V8 AC009237.17-201ENST00000618111 748 ntBASIC3.33□□□□□ -1.88
LINC01561Q8N1V8 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC3.33□□□□□ -1.88
LINC01561Q8N1V8 AC012414.7-202ENST00000622705 1090 ntBASIC3.33□□□□□ -1.88
LINC01561Q8N1V8 AC126544.2-201ENST00000625174 749 ntBASIC3.33□□□□□ -1.88
LINC01561Q8N1V8 AC138649.5-201ENST00000637456 137 ntBASIC3.33□□□□□ -1.88
LINC01561Q8N1V8 AC106858.1-201ENST00000637497 429 ntBASIC3.33□□□□□ -1.88
LINC01561Q8N1V8 AC008725.1-201ENST00000605123 2263 ntBASIC3.33□□□□□ -1.88
LINC01561Q8N1V8 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
LINC01561Q8N1V8 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
LINC01561Q8N1V8 AC111188.2-201ENST00000529697 1387 ntBASIC3.33□□□□□ -1.88
LINC01561Q8N1V8 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
LINC01561Q8N1V8 AC011266.1-201ENST00000624119 3569 ntBASIC3.33□□□□□ -1.88
LINC01561Q8N1V8 SAMMSON-226ENST00000642089 1582 ntBASIC3.33□□□□□ -1.88
LINC01561Q8N1V8 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
LINC01561Q8N1V8 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
LINC01561Q8N1V8 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC3.33□□□□□ -1.88
LINC01561Q8N1V8 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
LINC01561Q8N1V8 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
LINC01561Q8N1V8 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.32□□□□□ -1.88
LINC01561Q8N1V8 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
LINC01561Q8N1V8 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC3.32□□□□□ -1.88
LINC01561Q8N1V8 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
LINC01561Q8N1V8 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.32□□□□□ -1.88
LINC01561Q8N1V8 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
LINC01561Q8N1V8 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
LINC01561Q8N1V8 RNU1-83P-201ENST00000363426 164 ntBASIC3.32□□□□□ -1.88
LINC01561Q8N1V8 RNU1-130P-201ENST00000363930 160 ntBASIC3.32□□□□□ -1.88
LINC01561Q8N1V8 RNA5SP132-201ENST00000364725 118 ntBASIC3.32□□□□□ -1.88
LINC01561Q8N1V8 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LINC01561Q8N1V8 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC3.32□□□□□ -1.88
LINC01561Q8N1V8 RNU6-575P-201ENST00000411326 105 ntBASIC3.32□□□□□ -1.88
LINC01561Q8N1V8 AL133384.1-201ENST00000412744 351 ntBASIC3.32□□□□□ -1.88
LINC01561Q8N1V8 RPS7P9-201ENST00000414704 586 ntBASIC3.32□□□□□ -1.88
LINC01561Q8N1V8 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC3.32□□□□□ -1.88
LINC01561Q8N1V8 USP9YP21-201ENST00000420603 432 ntBASIC3.32□□□□□ -1.88
LINC01561Q8N1V8 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.32□□□□□ -1.88
LINC01561Q8N1V8 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.32□□□□□ -1.88
LINC01561Q8N1V8 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.32□□□□□ -1.88
LINC01561Q8N1V8 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC3.32□□□□□ -1.88
LINC01561Q8N1V8 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC3.32□□□□□ -1.88
LINC01561Q8N1V8 AC004938.1-201ENST00000438468 308 ntBASIC3.32□□□□□ -1.88
LINC01561Q8N1V8 AC241584.1-201ENST00000438469 1241 ntBASIC3.32□□□□□ -1.88
LINC01561Q8N1V8 PTGES3P1-201ENST00000439531 483 ntBASIC3.32□□□□□ -1.88
LINC01561Q8N1V8 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.32□□□□□ -1.88
LINC01561Q8N1V8 AC073052.1-201ENST00000440417 714 ntBASIC3.32□□□□□ -1.88
LINC01561Q8N1V8 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.32□□□□□ -1.88
LINC01561Q8N1V8 HMGN1P36-201ENST00000446623 298 ntBASIC3.32□□□□□ -1.88
LINC01561Q8N1V8 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC3.32□□□□□ -1.88
LINC01561Q8N1V8 AC004022.1-201ENST00000447766 1066 ntBASIC3.32□□□□□ -1.88
LINC01561Q8N1V8 OR52J1P-201ENST00000450596 932 ntBASIC3.32□□□□□ -1.88
LINC01561Q8N1V8 AC244505.3-201ENST00000454598 187 ntBASIC3.32□□□□□ -1.88
LINC01561Q8N1V8 TVP23BP2-201ENST00000455082 615 ntBASIC3.32□□□□□ -1.88
LINC01561Q8N1V8 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
LINC01561Q8N1V8 AC006967.1-201ENST00000467608 589 ntBASIC3.32□□□□□ -1.88
LINC01561Q8N1V8 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC3.32□□□□□ -1.88
LINC01561Q8N1V8 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC3.32□□□□□ -1.88
LINC01561Q8N1V8 RN7SL649P-201ENST00000496974 275 ntBASIC3.32□□□□□ -1.88
LINC01561Q8N1V8 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC3.32□□□□□ -1.88
LINC01561Q8N1V8 BOLA3P3-201ENST00000505182 232 ntBASIC3.32□□□□□ -1.88
LINC01561Q8N1V8 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.32□□□□□ -1.88
LINC01561Q8N1V8 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC3.32□□□□□ -1.88
LINC01561Q8N1V8 AC005921.1-201ENST00000510589 286 ntBASIC3.32□□□□□ -1.88
LINC01561Q8N1V8 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.32□□□□□ -1.88
LINC01561Q8N1V8 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.32□□□□□ -1.88
LINC01561Q8N1V8 AC112191.2-201ENST00000522428 333 ntBASIC3.32□□□□□ -1.88
LINC01561Q8N1V8 OSBPL9P2-201ENST00000526582 1228 ntBASIC3.32□□□□□ -1.88
LINC01561Q8N1V8 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC3.32□□□□□ -1.88
LINC01561Q8N1V8 OR4A46P-201ENST00000527255 933 ntBASIC3.32□□□□□ -1.88
LINC01561Q8N1V8 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC3.32□□□□□ -1.88
LINC01561Q8N1V8 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC3.32□□□□□ -1.88
LINC01561Q8N1V8 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
LINC01561Q8N1V8 AC135001.1-201ENST00000544546 283 ntBASIC3.32□□□□□ -1.88
LINC01561Q8N1V8 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC3.32□□□□□ -1.88
LINC01561Q8N1V8 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC3.32□□□□□ -1.88
LINC01561Q8N1V8 AC007424.1-203ENST00000554613 687 ntBASIC3.32□□□□□ -1.88
LINC01561Q8N1V8 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC3.32□□□□□ -1.88
LINC01561Q8N1V8 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
LINC01561Q8N1V8 AC090666.1-201ENST00000578241 445 ntBASIC3.32□□□□□ -1.88
LINC01561Q8N1V8 SNORA74C-1-201ENST00000580726 201 ntBASIC3.32□□□□□ -1.88
LINC01561Q8N1V8 AC104695.2-201ENST00000605056 775 ntBASIC3.32□□□□□ -1.88
LINC01561Q8N1V8 AL513477.2-201ENST00000607858 568 ntBASIC3.32□□□□□ -1.88
LINC01561Q8N1V8 AP000238.1-201ENST00000608759 426 ntBASIC3.32□□□□□ -1.88
LINC01561Q8N1V8 AC099676.1-201ENST00000608886 657 ntBASIC3.32□□□□□ -1.88
LINC01561Q8N1V8 AC093673.2-201ENST00000609674 331 ntBASIC3.32□□□□□ -1.88
LINC01561Q8N1V8 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.32□□□□□ -1.88
LINC01561Q8N1V8 AL512427.1-201ENST00000618593 349 ntBASIC3.32□□□□□ -1.88
LINC01561Q8N1V8 AL713922.2-201ENST00000619384 716 ntBASIC3.32□□□□□ -1.88
LINC01561Q8N1V8 MIR6837-201ENST00000620884 64 ntBASIC3.32□□□□□ -1.88
LINC01561Q8N1V8 AP003485.1-201ENST00000625093 753 ntBASIC3.32□□□□□ -1.88
LINC01561Q8N1V8 AL353662.3-201ENST00000625131 237 ntBASIC3.32□□□□□ -1.88
LINC01561Q8N1V8 AL138960.2-201ENST00000625145 535 ntBASIC3.32□□□□□ -1.88
LINC01561Q8N1V8 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.32□□□□□ -1.88
LINC01561Q8N1V8 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC3.32□□□□□ -1.88
LINC01561Q8N1V8 ZNF37BP-203ENST00000452306 1352 ntBASIC3.32□□□□□ -1.88
LINC01561Q8N1V8 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.32□□□□□ -1.88
LINC01561Q8N1V8 AC009643.2-201ENST00000603543 1448 ntBASIC3.32□□□□□ -1.88
LINC01561Q8N1V8 AC006971.1-201ENST00000407916 4486 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms