Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LINC00346Q8IVM7 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LINC00346Q8IVM7 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LINC00346Q8IVM7 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LINC00346Q8IVM7 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
LINC00346Q8IVM7 AC005261.4-201ENST00000600047 1385 ntBASIC4.33□□□□□ -1.72
LINC00346Q8IVM7 SUCLA2P2-201ENST00000417269 1309 ntBASIC4.33□□□□□ -1.72
LINC00346Q8IVM7 RNU6-582P-201ENST00000362989 107 ntBASIC4.33□□□□□ -1.72
LINC00346Q8IVM7 SNORA72.3-201ENST00000365074 132 ntBASIC4.33□□□□□ -1.72
LINC00346Q8IVM7 RNU6-356P-201ENST00000384140 107 ntBASIC4.33□□□□□ -1.72
LINC00346Q8IVM7 RNU6-441P-201ENST00000384545 106 ntBASIC4.33□□□□□ -1.72
LINC00346Q8IVM7 SSXP10-201ENST00000402595 565 ntBASIC4.33□□□□□ -1.72
LINC00346Q8IVM7 AL021331.1-201ENST00000402817 582 ntBASIC4.33□□□□□ -1.72
LINC00346Q8IVM7 AL357515.1-201ENST00000402967 542 ntBASIC4.33□□□□□ -1.72
LINC00346Q8IVM7 AL080315.1-201ENST00000406055 466 ntBASIC4.33□□□□□ -1.72
LINC00346Q8IVM7 RNU6-584P-201ENST00000410350 95 ntBASIC4.33□□□□□ -1.72
LINC00346Q8IVM7 MTCO2P8-201ENST00000412213 658 ntBASIC4.33□□□□□ -1.72
LINC00346Q8IVM7 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC4.33□□□□□ -1.72
LINC00346Q8IVM7 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.33□□□□□ -1.72
LINC00346Q8IVM7 COX6CP15-201ENST00000426313 211 ntBASIC4.33□□□□□ -1.72
LINC00346Q8IVM7 Z93242.1-201ENST00000427102 353 ntBASIC4.33□□□□□ -1.72
LINC00346Q8IVM7 GTF2IP7-202ENST00000436677 309 ntBASIC4.33□□□□□ -1.72
LINC00346Q8IVM7 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.33□□□□□ -1.72
LINC00346Q8IVM7 AC004854.1-201ENST00000440356 349 ntBASIC4.33□□□□□ -1.72
LINC00346Q8IVM7 AL137845.2-201ENST00000444292 988 ntBASIC4.33□□□□□ -1.72
LINC00346Q8IVM7 AL034418.1-201ENST00000448675 860 ntBASIC4.33□□□□□ -1.72
LINC00346Q8IVM7 NDUFA5P7-201ENST00000452914 242 ntBASIC4.33□□□□□ -1.72
LINC00346Q8IVM7 AC016724.1-201ENST00000453215 421 ntBASIC4.33□□□□□ -1.72
LINC00346Q8IVM7 RPL37P6-202ENST00000464216 403 ntBASIC4.33□□□□□ -1.72
LINC00346Q8IVM7 RPS26P39-201ENST00000469206 341 ntBASIC4.33□□□□□ -1.72
LINC00346Q8IVM7 RN7SL727P-201ENST00000482164 296 ntBASIC4.33□□□□□ -1.72
LINC00346Q8IVM7 TRAV31-201ENST00000502780 342 ntBASIC4.33□□□□□ -1.72
LINC00346Q8IVM7 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.33□□□□□ -1.72
LINC00346Q8IVM7 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.33□□□□□ -1.72
LINC00346Q8IVM7 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.33□□□□□ -1.72
LINC00346Q8IVM7 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LINC00346Q8IVM7 AC113347.3-201ENST00000509113 148 ntBASIC4.33□□□□□ -1.72
LINC00346Q8IVM7 AC109471.1-201ENST00000511631 612 ntBASIC4.33□□□□□ -1.72
LINC00346Q8IVM7 RN7SKP157-201ENST00000516174 282 ntBASIC4.33□□□□□ -1.72
LINC00346Q8IVM7 RNA5SP92-201ENST00000516437 110 ntBASIC4.33□□□□□ -1.72
LINC00346Q8IVM7 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC4.33□□□□□ -1.72
LINC00346Q8IVM7 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.33□□□□□ -1.72
LINC00346Q8IVM7 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LINC00346Q8IVM7 AC092490.3-201ENST00000545370 572 ntBASIC4.33□□□□□ -1.72
LINC00346Q8IVM7 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.33□□□□□ -1.72
LINC00346Q8IVM7 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.33□□□□□ -1.72
LINC00346Q8IVM7 MIR3691-201ENST00000578066 90 ntBASIC4.33□□□□□ -1.72
LINC00346Q8IVM7 RN7SL339P-201ENST00000580597 296 ntBASIC4.33□□□□□ -1.72
LINC00346Q8IVM7 MIR3176-201ENST00000582210 90 ntBASIC4.33□□□□□ -1.72
LINC00346Q8IVM7 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.33□□□□□ -1.72
LINC00346Q8IVM7 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.33□□□□□ -1.72
LINC00346Q8IVM7 AC007566.2-201ENST00000603642 413 ntBASIC4.33□□□□□ -1.72
LINC00346Q8IVM7 AL445435.1-201ENST00000604232 665 ntBASIC4.33□□□□□ -1.72
LINC00346Q8IVM7 AC069545.1-201ENST00000605671 358 ntBASIC4.33□□□□□ -1.72
LINC00346Q8IVM7 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.33□□□□□ -1.72
LINC00346Q8IVM7 OR6R2P-201ENST00000609216 300 ntBASIC4.33□□□□□ -1.72
LINC00346Q8IVM7 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LINC00346Q8IVM7 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.33□□□□□ -1.72
LINC00346Q8IVM7 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.33□□□□□ -1.72
LINC00346Q8IVM7 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
LINC00346Q8IVM7 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
LINC00346Q8IVM7 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
LINC00346Q8IVM7 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.32□□□□□ -1.72
LINC00346Q8IVM7 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
LINC00346Q8IVM7 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
LINC00346Q8IVM7 SALL4P2-201ENST00000423288 2910 ntBASIC4.32□□□□□ -1.72
LINC00346Q8IVM7 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
LINC00346Q8IVM7 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
LINC00346Q8IVM7 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
LINC00346Q8IVM7 MTCO1P11-201ENST00000429111 1528 ntBASIC4.32□□□□□ -1.72
LINC00346Q8IVM7 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
LINC00346Q8IVM7 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
LINC00346Q8IVM7 THAP12P4-201ENST00000528321 2266 ntBASIC4.32□□□□□ -1.72
LINC00346Q8IVM7 DDX18P5-201ENST00000534547 1306 ntBASIC4.32□□□□□ -1.72
LINC00346Q8IVM7 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
LINC00346Q8IVM7 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
LINC00346Q8IVM7 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
LINC00346Q8IVM7 RNA5SP428-201ENST00000365129 132 ntBASIC4.32□□□□□ -1.72
LINC00346Q8IVM7 RNU6-921P-201ENST00000384361 107 ntBASIC4.32□□□□□ -1.72
LINC00346Q8IVM7 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
LINC00346Q8IVM7 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.32□□□□□ -1.72
LINC00346Q8IVM7 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.32□□□□□ -1.72
LINC00346Q8IVM7 MTATP6P20-201ENST00000414147 562 ntBASIC4.32□□□□□ -1.72
LINC00346Q8IVM7 TBCAP2-201ENST00000416175 326 ntBASIC4.32□□□□□ -1.72
LINC00346Q8IVM7 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.32□□□□□ -1.72
LINC00346Q8IVM7 RPL36AP10-201ENST00000421785 322 ntBASIC4.32□□□□□ -1.72
LINC00346Q8IVM7 MTND2P9-201ENST00000422293 931 ntBASIC4.32□□□□□ -1.72
LINC00346Q8IVM7 AL355433.1-201ENST00000422804 300 ntBASIC4.32□□□□□ -1.72
LINC00346Q8IVM7 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
LINC00346Q8IVM7 RGS17P1-201ENST00000423358 553 ntBASIC4.32□□□□□ -1.72
LINC00346Q8IVM7 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC4.32□□□□□ -1.72
LINC00346Q8IVM7 PSMA2P3-201ENST00000429685 675 ntBASIC4.32□□□□□ -1.72
LINC00346Q8IVM7 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.32□□□□□ -1.72
LINC00346Q8IVM7 RPL36P19-201ENST00000430744 301 ntBASIC4.32□□□□□ -1.72
LINC00346Q8IVM7 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.32□□□□□ -1.72
LINC00346Q8IVM7 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.32□□□□□ -1.72
LINC00346Q8IVM7 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.32□□□□□ -1.72
LINC00346Q8IVM7 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC4.32□□□□□ -1.72
LINC00346Q8IVM7 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.32□□□□□ -1.72
LINC00346Q8IVM7 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms