Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC71Q8IV32 ATP5F1P6-201ENST00000402768 767 ntBASIC4.13□□□□□ -1.75
CCDC71Q8IV32 AL078604.1-201ENST00000404609 466 ntBASIC4.13□□□□□ -1.75
CCDC71Q8IV32 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.13□□□□□ -1.75
CCDC71Q8IV32 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC71Q8IV32 AC009302.1-201ENST00000417147 390 ntBASIC4.13□□□□□ -1.75
CCDC71Q8IV32 UBTFL3-201ENST00000418934 1024 ntBASIC4.13□□□□□ -1.75
CCDC71Q8IV32 RPL7AP25-201ENST00000423357 805 ntBASIC4.13□□□□□ -1.75
CCDC71Q8IV32 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC4.13□□□□□ -1.75
CCDC71Q8IV32 RPEP2-201ENST00000432149 701 ntBASIC4.13□□□□□ -1.75
CCDC71Q8IV32 FHP1-201ENST00000442741 703 ntBASIC4.13□□□□□ -1.75
CCDC71Q8IV32 MOB1AP2-201ENST00000446060 614 ntBASIC4.13□□□□□ -1.75
CCDC71Q8IV32 NUTF2P7-201ENST00000453086 375 ntBASIC4.13□□□□□ -1.75
CCDC71Q8IV32 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.13□□□□□ -1.75
CCDC71Q8IV32 UBTFL6-201ENST00000477929 1024 ntBASIC4.13□□□□□ -1.75
CCDC71Q8IV32 RPL36AP41-201ENST00000493820 306 ntBASIC4.13□□□□□ -1.75
CCDC71Q8IV32 RPS6P4-201ENST00000494693 758 ntBASIC4.13□□□□□ -1.75
CCDC71Q8IV32 PRELID3BP7-201ENST00000503606 469 ntBASIC4.13□□□□□ -1.75
CCDC71Q8IV32 AC016550.1-201ENST00000505348 785 ntBASIC4.13□□□□□ -1.75
CCDC71Q8IV32 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC71Q8IV32 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC71Q8IV32 RN7SKP141-201ENST00000516167 338 ntBASIC4.13□□□□□ -1.75
CCDC71Q8IV32 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC71Q8IV32 IFITM8P-201ENST00000522529 394 ntBASIC4.13□□□□□ -1.75
CCDC71Q8IV32 AC138701.1-201ENST00000524329 714 ntBASIC4.13□□□□□ -1.75
CCDC71Q8IV32 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC71Q8IV32 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC4.13□□□□□ -1.75
CCDC71Q8IV32 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.13□□□□□ -1.75
CCDC71Q8IV32 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.13□□□□□ -1.75
CCDC71Q8IV32 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC71Q8IV32 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC4.13□□□□□ -1.75
CCDC71Q8IV32 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC71Q8IV32 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.13□□□□□ -1.75
CCDC71Q8IV32 AC069366.1-201ENST00000583159 838 ntBASIC4.13□□□□□ -1.75
CCDC71Q8IV32 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC71Q8IV32 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC71Q8IV32 AC005034.4-201ENST00000603612 899 ntBASIC4.13□□□□□ -1.75
CCDC71Q8IV32 AC092653.1-201ENST00000608509 531 ntBASIC4.13□□□□□ -1.75
CCDC71Q8IV32 AC110792.4-201ENST00000609843 298 ntBASIC4.13□□□□□ -1.75
CCDC71Q8IV32 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC4.13□□□□□ -1.75
CCDC71Q8IV32 AC011472.4-201ENST00000615848 491 ntBASIC4.13□□□□□ -1.75
CCDC71Q8IV32 AL035461.2-201ENST00000619201 524 ntBASIC4.13□□□□□ -1.75
CCDC71Q8IV32 AC095038.2-201ENST00000621464 1070 ntBASIC4.13□□□□□ -1.75
CCDC71Q8IV32 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.13□□□□□ -1.75
CCDC71Q8IV32 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
CCDC71Q8IV32 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC71Q8IV32 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC71Q8IV32 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
CCDC71Q8IV32 MTND5P11-201ENST00000511037 1812 ntBASIC4.13□□□□□ -1.75
CCDC71Q8IV32 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
CCDC71Q8IV32 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.12□□□□□ -1.75
CCDC71Q8IV32 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC71Q8IV32 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC71Q8IV32 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC71Q8IV32 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC71Q8IV32 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC71Q8IV32 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC71Q8IV32 RNU1-15P-201ENST00000353977 144 ntBASIC4.12□□□□□ -1.75
CCDC71Q8IV32 MIR448-201ENST00000362131 111 ntBASIC4.12□□□□□ -1.75
CCDC71Q8IV32 RNA5SP502-201ENST00000362694 119 ntBASIC4.12□□□□□ -1.75
CCDC71Q8IV32 Y_RNA.126-201ENST00000363382 111 ntBASIC4.12□□□□□ -1.75
CCDC71Q8IV32 MIR320B1-201ENST00000390209 79 ntBASIC4.12□□□□□ -1.75
CCDC71Q8IV32 RNU6-244P-201ENST00000391028 104 ntBASIC4.12□□□□□ -1.75
CCDC71Q8IV32 FCF1P5-201ENST00000406490 482 ntBASIC4.12□□□□□ -1.75
CCDC71Q8IV32 RNA5SP39-201ENST00000411245 120 ntBASIC4.12□□□□□ -1.75
CCDC71Q8IV32 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.12□□□□□ -1.75
CCDC71Q8IV32 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.12□□□□□ -1.75
CCDC71Q8IV32 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.12□□□□□ -1.75
CCDC71Q8IV32 DPY19L1P2-201ENST00000426647 915 ntBASIC4.12□□□□□ -1.75
CCDC71Q8IV32 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC71Q8IV32 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC4.12□□□□□ -1.75
CCDC71Q8IV32 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC71Q8IV32 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC4.12□□□□□ -1.75
CCDC71Q8IV32 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC71Q8IV32 CLIC4P1-201ENST00000453177 535 ntBASIC4.12□□□□□ -1.75
CCDC71Q8IV32 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC71Q8IV32 RPL23AP24-201ENST00000458203 385 ntBASIC4.12□□□□□ -1.75
CCDC71Q8IV32 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC71Q8IV32 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC71Q8IV32 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC4.12□□□□□ -1.75
CCDC71Q8IV32 AC098799.3-201ENST00000506095 438 ntBASIC4.12□□□□□ -1.75
CCDC71Q8IV32 AC006499.6-201ENST00000511169 607 ntBASIC4.12□□□□□ -1.75
CCDC71Q8IV32 CIR1P1-201ENST00000524055 1133 ntBASIC4.12□□□□□ -1.75
CCDC71Q8IV32 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC71Q8IV32 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC71Q8IV32 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.12□□□□□ -1.75
CCDC71Q8IV32 CYP4A43P-201ENST00000568156 121 ntBASIC4.12□□□□□ -1.75
CCDC71Q8IV32 AL160290.3-201ENST00000604869 165 ntBASIC4.12□□□□□ -1.75
CCDC71Q8IV32 ARF4P1-201ENST00000605447 541 ntBASIC4.12□□□□□ -1.75
CCDC71Q8IV32 MIR6716-201ENST00000613413 80 ntBASIC4.12□□□□□ -1.75
CCDC71Q8IV32 AP004607.9-201ENST00000618202 316 ntBASIC4.12□□□□□ -1.75
CCDC71Q8IV32 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.12□□□□□ -1.75
CCDC71Q8IV32 RMST_9.1-201ENST00000619945 193 ntBASIC4.12□□□□□ -1.75
CCDC71Q8IV32 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC4.12□□□□□ -1.75
CCDC71Q8IV32 AC007342.8-201ENST00000623278 678 ntBASIC4.12□□□□□ -1.75
CCDC71Q8IV32 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.12□□□□□ -1.75
CCDC71Q8IV32 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC71Q8IV32 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.12□□□□□ -1.75
CCDC71Q8IV32 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
CCDC71Q8IV32 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms