Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC2.61□□□□□ -1.99
CSMD3Q7Z407 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC2.61□□□□□ -1.99
CSMD3Q7Z407 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CSMD3Q7Z407 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
CSMD3Q7Z407 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.6□□□□□ -1.99
CSMD3Q7Z407 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CSMD3Q7Z407 HMGB3P16-201ENST00000508037 287 ntBASIC2.6□□□□□ -1.99
CSMD3Q7Z407 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC2.6□□□□□ -1.99
CSMD3Q7Z407 RFPL4AP5-201ENST00000514977 504 ntBASIC2.6□□□□□ -1.99
CSMD3Q7Z407 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC2.6□□□□□ -1.99
CSMD3Q7Z407 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC2.6□□□□□ -1.99
CSMD3Q7Z407 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.6□□□□□ -1.99
CSMD3Q7Z407 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC2.6□□□□□ -1.99
CSMD3Q7Z407 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CSMD3Q7Z407 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CSMD3Q7Z407 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CSMD3Q7Z407 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
CSMD3Q7Z407 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC2.6□□□□□ -1.99
CSMD3Q7Z407 AC007656.2-201ENST00000624902 4547 ntBASIC2.6□□□□□ -1.99
CSMD3Q7Z407 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC2.6□□□□□ -1.99
CSMD3Q7Z407 AL034403.1-201ENST00000399414 885 ntBASIC2.6□□□□□ -1.99
CSMD3Q7Z407 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC2.6□□□□□ -1.99
CSMD3Q7Z407 RPL5P12-201ENST00000477071 851 ntBASIC2.6□□□□□ -1.99
CSMD3Q7Z407 RPL31P61-201ENST00000496160 376 ntBASIC2.6□□□□□ -1.99
CSMD3Q7Z407 AC010342.1-201ENST00000514047 877 ntBASIC2.6□□□□□ -1.99
CSMD3Q7Z407 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.6□□□□□ -1.99
CSMD3Q7Z407 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC2.6□□□□□ -1.99
CSMD3Q7Z407 MEG8-215ENST00000555354 469 ntTSL 3 BASIC2.6□□□□□ -1.99
CSMD3Q7Z407 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC2.6□□□□□ -1.99
CSMD3Q7Z407 AL049844.2-201ENST00000604280 628 ntBASIC2.6□□□□□ -1.99
CSMD3Q7Z407 COX6CP4-201ENST00000605798 228 ntBASIC2.6□□□□□ -1.99
CSMD3Q7Z407 AC022106.2-201ENST00000620114 757 ntBASIC2.6□□□□□ -1.99
CSMD3Q7Z407 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CSMD3Q7Z407 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CSMD3Q7Z407 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CSMD3Q7Z407 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC2.6□□□□□ -1.99
CSMD3Q7Z407 HSPD1P14-201ENST00000432666 1618 ntBASIC2.6□□□□□ -1.99
CSMD3Q7Z407 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CSMD3Q7Z407 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CSMD3Q7Z407 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CSMD3Q7Z407 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC2.6□□□□□ -1.99
CSMD3Q7Z407 RPL12P22-201ENST00000519073 490 ntBASIC2.6□□□□□ -1.99
CSMD3Q7Z407 AC063950.1-201ENST00000552036 308 ntBASIC2.6□□□□□ -1.99
CSMD3Q7Z407 AL359219.2-201ENST00000555184 348 ntBASIC2.6□□□□□ -1.99
CSMD3Q7Z407 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC2.6□□□□□ -1.99
CSMD3Q7Z407 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CSMD3Q7Z407 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC2.6□□□□□ -1.99
CSMD3Q7Z407 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC2.6□□□□□ -1.99
CSMD3Q7Z407 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CSMD3Q7Z407 BDP1P-201ENST00000582658 1990 ntBASIC2.6□□□□□ -1.99
CSMD3Q7Z407 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CSMD3Q7Z407 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CSMD3Q7Z407 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC2.6□□□□□ -1.99
CSMD3Q7Z407 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC2.59□□□□□ -1.99
CSMD3Q7Z407 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC2.59□□□□□ -1.99
CSMD3Q7Z407 RBMY2UP-201ENST00000453474 324 ntBASIC2.59□□□□□ -1.99
CSMD3Q7Z407 SNORD105B-201ENST00000458770 79 ntBASIC2.59□□□□□ -1.99
CSMD3Q7Z407 SNRPCP3-201ENST00000474888 476 ntBASIC2.59□□□□□ -1.99
CSMD3Q7Z407 DEFB109A-201ENST00000482450 265 ntBASIC2.59□□□□□ -1.99
CSMD3Q7Z407 RN7SKP18-201ENST00000516005 275 ntBASIC2.59□□□□□ -1.99
CSMD3Q7Z407 RNA5SP303-201ENST00000516192 130 ntBASIC2.59□□□□□ -1.99
CSMD3Q7Z407 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC2.59□□□□□ -1.99
CSMD3Q7Z407 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC2.59□□□□□ -1.99
CSMD3Q7Z407 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC2.59□□□□□ -1.99
CSMD3Q7Z407 AC104763.2-201ENST00000604179 382 ntBASIC2.59□□□□□ -1.99
CSMD3Q7Z407 AL391497.1-201ENST00000608671 547 ntBASIC2.59□□□□□ -1.99
CSMD3Q7Z407 ATP5A1P2-202ENST00000616464 443 ntBASIC2.59□□□□□ -1.99
CSMD3Q7Z407 AC068722.2-201ENST00000618734 544 ntBASIC2.59□□□□□ -1.99
CSMD3Q7Z407 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
CSMD3Q7Z407 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
CSMD3Q7Z407 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC2.59□□□□□ -1.99
CSMD3Q7Z407 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC2.59□□□□□ -1.99
CSMD3Q7Z407 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
CSMD3Q7Z407 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
CSMD3Q7Z407 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
CSMD3Q7Z407 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC2.59□□□□□ -1.99
CSMD3Q7Z407 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
CSMD3Q7Z407 OOSP1P1-201ENST00000423265 274 ntBASIC2.59□□□□□ -1.99
CSMD3Q7Z407 AL591419.1-201ENST00000427423 339 ntBASIC2.59□□□□□ -1.99
CSMD3Q7Z407 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC2.59□□□□□ -1.99
CSMD3Q7Z407 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
CSMD3Q7Z407 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
CSMD3Q7Z407 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
CSMD3Q7Z407 AC010300.1-201ENST00000600671 5134 ntBASIC2.59□□□□□ -1.99
CSMD3Q7Z407 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
CSMD3Q7Z407 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC2.59□□□□□ -2
CSMD3Q7Z407 RNU4-35P-201ENST00000362588 141 ntBASIC2.59□□□□□ -2
CSMD3Q7Z407 CRP-203ENST00000368111 512 ntTSL 3 BASIC2.59□□□□□ -2
CSMD3Q7Z407 AC005019.1-201ENST00000436455 431 ntBASIC2.59□□□□□ -2
CSMD3Q7Z407 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC2.59□□□□□ -2
CSMD3Q7Z407 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC2.59□□□□□ -2
CSMD3Q7Z407 AC011825.1-201ENST00000484967 388 ntBASIC2.59□□□□□ -2
CSMD3Q7Z407 AC090151.1-201ENST00000520784 730 ntBASIC2.59□□□□□ -2
CSMD3Q7Z407 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.59□□□□□ -2
CSMD3Q7Z407 MIR7106-201ENST00000612419 65 ntBASIC2.59□□□□□ -2
CSMD3Q7Z407 AL713922.2-201ENST00000619384 716 ntBASIC2.59□□□□□ -2
CSMD3Q7Z407 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC2.59□□□□□ -2
CSMD3Q7Z407 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC2.59□□□□□ -2
CSMD3Q7Z407 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
CSMD3Q7Z407 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC2.59□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 129.1 ms