Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 AC090877.1-201ENST00000561418 344 ntBASIC5.62□□□□□ -1.51
CDC42BPAQ5VT25 AC106782.4-201ENST00000568264 210 ntBASIC5.62□□□□□ -1.51
CDC42BPAQ5VT25 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC5.62□□□□□ -1.51
CDC42BPAQ5VT25 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC5.62□□□□□ -1.51
CDC42BPAQ5VT25 AP001002.2-201ENST00000625137 386 ntBASIC5.62□□□□□ -1.51
CDC42BPAQ5VT25 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.62□□□□□ -1.51
CDC42BPAQ5VT25 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.62□□□□□ -1.51
CDC42BPAQ5VT25 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CDC42BPAQ5VT25 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CDC42BPAQ5VT25 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
CDC42BPAQ5VT25 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
CDC42BPAQ5VT25 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CDC42BPAQ5VT25 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CDC42BPAQ5VT25 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.61□□□□□ -1.51
CDC42BPAQ5VT25 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
CDC42BPAQ5VT25 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CDC42BPAQ5VT25 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CDC42BPAQ5VT25 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
CDC42BPAQ5VT25 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CDC42BPAQ5VT25 AL139039.2-201ENST00000407436 479 ntBASIC5.61□□□□□ -1.51
CDC42BPAQ5VT25 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC5.61□□□□□ -1.51
CDC42BPAQ5VT25 AC087650.1-201ENST00000431445 468 ntBASIC5.61□□□□□ -1.51
CDC42BPAQ5VT25 AC005019.1-201ENST00000436455 431 ntBASIC5.61□□□□□ -1.51
CDC42BPAQ5VT25 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC5.61□□□□□ -1.51
CDC42BPAQ5VT25 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC5.61□□□□□ -1.51
CDC42BPAQ5VT25 AC108941.1-201ENST00000502853 530 ntBASIC5.61□□□□□ -1.51
CDC42BPAQ5VT25 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC5.61□□□□□ -1.51
CDC42BPAQ5VT25 FTH1P11-201ENST00000517577 551 ntBASIC5.61□□□□□ -1.51
CDC42BPAQ5VT25 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC5.61□□□□□ -1.51
CDC42BPAQ5VT25 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC5.61□□□□□ -1.51
CDC42BPAQ5VT25 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC5.61□□□□□ -1.51
CDC42BPAQ5VT25 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC5.61□□□□□ -1.51
CDC42BPAQ5VT25 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.61□□□□□ -1.51
CDC42BPAQ5VT25 AC063952.1-203ENST00000634410 658 ntBASIC5.61□□□□□ -1.51
CDC42BPAQ5VT25 HCFC2P1-201ENST00000392864 1592 ntBASIC5.61□□□□□ -1.51
CDC42BPAQ5VT25 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CDC42BPAQ5VT25 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDC42BPAQ5VT25 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.6□□□□□ -1.51
CDC42BPAQ5VT25 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDC42BPAQ5VT25 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDC42BPAQ5VT25 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CDC42BPAQ5VT25 AC096644.3-201ENST00000416788 338 ntBASIC5.6□□□□□ -1.51
CDC42BPAQ5VT25 KCTD9P3-201ENST00000434597 1169 ntBASIC5.6□□□□□ -1.51
CDC42BPAQ5VT25 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC5.6□□□□□ -1.51
CDC42BPAQ5VT25 RBMY2UP-201ENST00000453474 324 ntBASIC5.6□□□□□ -1.51
CDC42BPAQ5VT25 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC5.6□□□□□ -1.51
CDC42BPAQ5VT25 IGKV2OR2-8-201ENST00000558710 300 ntBASIC5.6□□□□□ -1.51
CDC42BPAQ5VT25 AC005000.2-201ENST00000605468 310 ntBASIC5.6□□□□□ -1.51
CDC42BPAQ5VT25 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC5.6□□□□□ -1.51
CDC42BPAQ5VT25 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC5.6□□□□□ -1.51
CDC42BPAQ5VT25 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDC42BPAQ5VT25 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.6□□□□□ -1.51
CDC42BPAQ5VT25 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC5.6□□□□□ -1.51
CDC42BPAQ5VT25 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDC42BPAQ5VT25 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC5.6□□□□□ -1.51
CDC42BPAQ5VT25 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
CDC42BPAQ5VT25 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDC42BPAQ5VT25 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDC42BPAQ5VT25 GNG5P5-201ENST00000420444 220 ntBASIC5.6□□□□□ -1.51
CDC42BPAQ5VT25 AC073063.1-201ENST00000434352 607 ntBASIC5.6□□□□□ -1.51
CDC42BPAQ5VT25 CYCSP35-201ENST00000451978 304 ntBASIC5.6□□□□□ -1.51
CDC42BPAQ5VT25 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC5.6□□□□□ -1.51
CDC42BPAQ5VT25 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC5.6□□□□□ -1.51
CDC42BPAQ5VT25 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC5.6□□□□□ -1.51
CDC42BPAQ5VT25 AC023161.2-201ENST00000551218 780 ntBASIC5.6□□□□□ -1.51
CDC42BPAQ5VT25 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC5.6□□□□□ -1.51
CDC42BPAQ5VT25 AC079880.2-201ENST00000603790 1213 ntBASIC5.6□□□□□ -1.51
CDC42BPAQ5VT25 AL353600.1-201ENST00000608148 251 ntBASIC5.6□□□□□ -1.51
CDC42BPAQ5VT25 MIR8057-201ENST00000620957 69 ntBASIC5.6□□□□□ -1.51
CDC42BPAQ5VT25 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CDC42BPAQ5VT25 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
CDC42BPAQ5VT25 CPD-202ENST00000543464 4007 ntTSL 2 BASIC5.59□□□□□ -1.51
CDC42BPAQ5VT25 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CDC42BPAQ5VT25 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CDC42BPAQ5VT25 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CDC42BPAQ5VT25 RNA5SP424-201ENST00000390988 115 ntBASIC5.59□□□□□ -1.51
CDC42BPAQ5VT25 EIF4EP1-201ENST00000422311 642 ntBASIC5.59□□□□□ -1.51
CDC42BPAQ5VT25 OSTCP5-201ENST00000425293 453 ntBASIC5.59□□□□□ -1.51
CDC42BPAQ5VT25 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CDC42BPAQ5VT25 Z75741.1-201ENST00000446793 314 ntBASIC5.59□□□□□ -1.51
CDC42BPAQ5VT25 SNORD105B-201ENST00000458770 79 ntBASIC5.59□□□□□ -1.51
CDC42BPAQ5VT25 AC093663.1-201ENST00000497190 394 ntBASIC5.59□□□□□ -1.51
CDC42BPAQ5VT25 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.59□□□□□ -1.52
CDC42BPAQ5VT25 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.58□□□□□ -1.52
CDC42BPAQ5VT25 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CDC42BPAQ5VT25 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CDC42BPAQ5VT25 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CDC42BPAQ5VT25 IL6-203ENST00000401651 539 ntTSL 2 BASIC5.58□□□□□ -1.52
CDC42BPAQ5VT25 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC5.58□□□□□ -1.52
CDC42BPAQ5VT25 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC5.58□□□□□ -1.52
CDC42BPAQ5VT25 RPL21P10-201ENST00000463521 490 ntBASIC5.58□□□□□ -1.52
CDC42BPAQ5VT25 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC5.58□□□□□ -1.52
CDC42BPAQ5VT25 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC5.58□□□□□ -1.52
CDC42BPAQ5VT25 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC5.58□□□□□ -1.52
CDC42BPAQ5VT25 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC5.58□□□□□ -1.52
CDC42BPAQ5VT25 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC5.58□□□□□ -1.52
CDC42BPAQ5VT25 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC5.58□□□□□ -1.52
CDC42BPAQ5VT25 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC5.58□□□□□ -1.52
CDC42BPAQ5VT25 AC006077.1-201ENST00000604746 343 ntBASIC5.58□□□□□ -1.52
CDC42BPAQ5VT25 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms