Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
RIF1Q5UIP0 AL513548.1-201ENST00000562904 1724 ntBASIC3.73□□□□□ -1.81
RIF1Q5UIP0 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC3.73□□□□□ -1.81
RIF1Q5UIP0 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
RIF1Q5UIP0 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
RIF1Q5UIP0 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC3.73□□□□□ -1.81
RIF1Q5UIP0 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
RIF1Q5UIP0 SNORD9-201ENST00000362566 104 ntBASIC3.73□□□□□ -1.81
RIF1Q5UIP0 RNU4-35P-201ENST00000362588 141 ntBASIC3.73□□□□□ -1.81
RIF1Q5UIP0 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.73□□□□□ -1.81
RIF1Q5UIP0 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
RIF1Q5UIP0 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC3.73□□□□□ -1.81
RIF1Q5UIP0 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC3.73□□□□□ -1.81
RIF1Q5UIP0 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.73□□□□□ -1.81
RIF1Q5UIP0 AC022695.1-201ENST00000522089 237 ntBASIC3.73□□□□□ -1.81
RIF1Q5UIP0 AC087276.1-201ENST00000529659 480 ntBASIC3.73□□□□□ -1.81
RIF1Q5UIP0 AC135001.1-201ENST00000544546 283 ntBASIC3.73□□□□□ -1.81
RIF1Q5UIP0 AL121576.1-201ENST00000556055 276 ntBASIC3.73□□□□□ -1.81
RIF1Q5UIP0 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
RIF1Q5UIP0 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC3.73□□□□□ -1.81
RIF1Q5UIP0 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
RIF1Q5UIP0 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
RIF1Q5UIP0 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
RIF1Q5UIP0 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.73□□□□□ -1.81
RIF1Q5UIP0 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.73□□□□□ -1.81
RIF1Q5UIP0 RNU6-7-201ENST00000364784 107 ntBASIC3.72□□□□□ -1.81
RIF1Q5UIP0 RNU6-8-201ENST00000365467 107 ntBASIC3.72□□□□□ -1.81
RIF1Q5UIP0 MIR1911-201ENST00000410783 80 ntBASIC3.72□□□□□ -1.81
RIF1Q5UIP0 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC3.72□□□□□ -1.81
RIF1Q5UIP0 AL121890.1-201ENST00000435457 205 ntBASIC3.72□□□□□ -1.81
RIF1Q5UIP0 RPL23AP12-201ENST00000467573 473 ntBASIC3.72□□□□□ -1.81
RIF1Q5UIP0 RNU2-27P-201ENST00000516185 142 ntBASIC3.72□□□□□ -1.81
RIF1Q5UIP0 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC3.72□□□□□ -1.81
RIF1Q5UIP0 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.72□□□□□ -1.81
RIF1Q5UIP0 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.72□□□□□ -1.81
RIF1Q5UIP0 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
RIF1Q5UIP0 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
RIF1Q5UIP0 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
RIF1Q5UIP0 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
RIF1Q5UIP0 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
RIF1Q5UIP0 SNORD35B-201ENST00000363660 87 ntBASIC3.72□□□□□ -1.81
RIF1Q5UIP0 RN7SKP167-201ENST00000411047 285 ntBASIC3.72□□□□□ -1.81
RIF1Q5UIP0 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.72□□□□□ -1.81
RIF1Q5UIP0 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC3.72□□□□□ -1.81
RIF1Q5UIP0 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.72□□□□□ -1.81
RIF1Q5UIP0 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.72□□□□□ -1.81
RIF1Q5UIP0 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.72□□□□□ -1.81
RIF1Q5UIP0 FABP3P2-201ENST00000453169 399 ntBASIC3.72□□□□□ -1.81
RIF1Q5UIP0 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.72□□□□□ -1.81
RIF1Q5UIP0 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC3.72□□□□□ -1.81
RIF1Q5UIP0 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC3.72□□□□□ -1.81
RIF1Q5UIP0 AC103843.2-201ENST00000530523 682 ntBASIC3.72□□□□□ -1.81
RIF1Q5UIP0 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.72□□□□□ -1.81
RIF1Q5UIP0 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
RIF1Q5UIP0 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.72□□□□□ -1.81
RIF1Q5UIP0 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
RIF1Q5UIP0 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
RIF1Q5UIP0 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
RIF1Q5UIP0 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
RIF1Q5UIP0 AC140134.1-201ENST00000511830 3544 ntBASIC3.72□□□□□ -1.81
RIF1Q5UIP0 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
RIF1Q5UIP0 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.81
RIF1Q5UIP0 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.71□□□□□ -1.81
RIF1Q5UIP0 RNA5SP293-201ENST00000410527 113 ntBASIC3.71□□□□□ -1.81
RIF1Q5UIP0 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.71□□□□□ -1.81
RIF1Q5UIP0 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC3.71□□□□□ -1.81
RIF1Q5UIP0 RBMY1KP-201ENST00000423480 476 ntBASIC3.71□□□□□ -1.81
RIF1Q5UIP0 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC3.71□□□□□ -1.81
RIF1Q5UIP0 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.71□□□□□ -1.81
RIF1Q5UIP0 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.71□□□□□ -1.81
RIF1Q5UIP0 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
RIF1Q5UIP0 AC026784.1-201ENST00000507986 352 ntBASIC3.71□□□□□ -1.81
RIF1Q5UIP0 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.71□□□□□ -1.81
RIF1Q5UIP0 RFPL4AP5-201ENST00000514977 504 ntBASIC3.71□□□□□ -1.81
RIF1Q5UIP0 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.71□□□□□ -1.81
RIF1Q5UIP0 AL049844.2-201ENST00000604280 628 ntBASIC3.71□□□□□ -1.81
RIF1Q5UIP0 AC008833.1-201ENST00000611633 691 ntBASIC3.71□□□□□ -1.81
RIF1Q5UIP0 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.71□□□□□ -1.81
RIF1Q5UIP0 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.81
RIF1Q5UIP0 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
RIF1Q5UIP0 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
RIF1Q5UIP0 OR56B2P-201ENST00000317102 954 ntBASIC3.71□□□□□ -1.82
RIF1Q5UIP0 OR56A5-201ENST00000340110 738 ntBASIC3.71□□□□□ -1.82
RIF1Q5UIP0 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
RIF1Q5UIP0 AL080315.1-201ENST00000406055 466 ntBASIC3.71□□□□□ -1.82
RIF1Q5UIP0 ATP5JP1-201ENST00000431631 322 ntBASIC3.71□□□□□ -1.82
RIF1Q5UIP0 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC3.71□□□□□ -1.82
RIF1Q5UIP0 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.71□□□□□ -1.82
RIF1Q5UIP0 BTF3P5-201ENST00000457252 467 ntBASIC3.71□□□□□ -1.82
RIF1Q5UIP0 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC3.71□□□□□ -1.82
RIF1Q5UIP0 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
RIF1Q5UIP0 BNIP3P41-201ENST00000503774 571 ntBASIC3.71□□□□□ -1.82
RIF1Q5UIP0 SNORA70.17-201ENST00000516449 133 ntBASIC3.71□□□□□ -1.82
RIF1Q5UIP0 AL121594.4-201ENST00000556211 1196 ntBASIC3.71□□□□□ -1.82
RIF1Q5UIP0 AC112503.1-201ENST00000608436 391 ntBASIC3.71□□□□□ -1.82
RIF1Q5UIP0 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
RIF1Q5UIP0 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
RIF1Q5UIP0 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
RIF1Q5UIP0 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC3.7□□□□□ -1.82
RIF1Q5UIP0 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms