Protein–RNA interactions for Protein: Q53S08

RAB6C, Rab6C, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6CQ53S08 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RAB6CQ53S08 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC4.54□□□□□ -1.68
RAB6CQ53S08 AC091163.3-201ENST00000518269 1144 ntBASIC4.54□□□□□ -1.68
RAB6CQ53S08 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.54□□□□□ -1.68
RAB6CQ53S08 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.54□□□□□ -1.68
RAB6CQ53S08 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.54□□□□□ -1.68
RAB6CQ53S08 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC4.54□□□□□ -1.68
RAB6CQ53S08 AC095057.3-201ENST00000567102 1157 ntBASIC4.54□□□□□ -1.68
RAB6CQ53S08 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.54□□□□□ -1.68
RAB6CQ53S08 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.54□□□□□ -1.68
RAB6CQ53S08 RPP40P2-201ENST00000603596 712 ntBASIC4.54□□□□□ -1.68
RAB6CQ53S08 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.54□□□□□ -1.68
RAB6CQ53S08 AC013244.3-201ENST00000605614 388 ntBASIC4.54□□□□□ -1.68
RAB6CQ53S08 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.54□□□□□ -1.68
RAB6CQ53S08 STMN1P1-201ENST00000617809 440 ntBASIC4.54□□□□□ -1.68
RAB6CQ53S08 FRG1HP-204ENST00000617940 757 ntBASIC4.54□□□□□ -1.68
RAB6CQ53S08 AL035461.2-201ENST00000619201 524 ntBASIC4.54□□□□□ -1.68
RAB6CQ53S08 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.54□□□□□ -1.68
RAB6CQ53S08 AL445363.3-201ENST00000623080 671 ntBASIC4.54□□□□□ -1.68
RAB6CQ53S08 AC024595.1-201ENST00000623088 387 ntBASIC4.54□□□□□ -1.68
RAB6CQ53S08 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.54□□□□□ -1.68
RAB6CQ53S08 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RAB6CQ53S08 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RAB6CQ53S08 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RAB6CQ53S08 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RAB6CQ53S08 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.54□□□□□ -1.68
RAB6CQ53S08 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC4.54□□□□□ -1.68
RAB6CQ53S08 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.54□□□□□ -1.68
RAB6CQ53S08 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
RAB6CQ53S08 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
RAB6CQ53S08 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RAB6CQ53S08 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
RAB6CQ53S08 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
RAB6CQ53S08 AC093311.1-201ENST00000506586 2021 ntBASIC4.53□□□□□ -1.68
RAB6CQ53S08 AC021242.1-201ENST00000507315 2035 ntBASIC4.53□□□□□ -1.68
RAB6CQ53S08 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RAB6CQ53S08 AC017104.4-201ENST00000636283 1592 ntBASIC4.53□□□□□ -1.68
RAB6CQ53S08 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
RAB6CQ53S08 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.53□□□□□ -1.68
RAB6CQ53S08 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.53□□□□□ -1.68
RAB6CQ53S08 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
RAB6CQ53S08 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RAB6CQ53S08 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
RAB6CQ53S08 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RAB6CQ53S08 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RAB6CQ53S08 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RAB6CQ53S08 MIR525-201ENST00000384978 85 ntBASIC4.53□□□□□ -1.68
RAB6CQ53S08 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.53□□□□□ -1.68
RAB6CQ53S08 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RAB6CQ53S08 MFSD13B-201ENST00000420133 1290 ntBASIC4.53□□□□□ -1.68
RAB6CQ53S08 USP12PY-201ENST00000427677 1064 ntBASIC4.53□□□□□ -1.68
RAB6CQ53S08 AC068287.1-201ENST00000430283 295 ntBASIC4.53□□□□□ -1.68
RAB6CQ53S08 RPL12P28-201ENST00000430852 489 ntBASIC4.53□□□□□ -1.68
RAB6CQ53S08 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.53□□□□□ -1.68
RAB6CQ53S08 EXOSC3P1-201ENST00000448649 500 ntBASIC4.53□□□□□ -1.68
RAB6CQ53S08 OR51B8P-201ENST00000449892 769 ntBASIC4.53□□□□□ -1.68
RAB6CQ53S08 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.53□□□□□ -1.68
RAB6CQ53S08 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RAB6CQ53S08 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.53□□□□□ -1.68
RAB6CQ53S08 NIP7P2-201ENST00000485801 544 ntBASIC4.53□□□□□ -1.68
RAB6CQ53S08 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC4.53□□□□□ -1.68
RAB6CQ53S08 AC108022.1-201ENST00000493466 478 ntBASIC4.53□□□□□ -1.68
RAB6CQ53S08 HPRT1P2-201ENST00000505250 544 ntBASIC4.53□□□□□ -1.68
RAB6CQ53S08 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.53□□□□□ -1.68
RAB6CQ53S08 AC108471.1-201ENST00000513977 287 ntBASIC4.53□□□□□ -1.68
RAB6CQ53S08 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC4.53□□□□□ -1.68
RAB6CQ53S08 CR383656.6-201ENST00000550518 394 ntBASIC4.53□□□□□ -1.68
RAB6CQ53S08 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.53□□□□□ -1.68
RAB6CQ53S08 NPM1P47-201ENST00000560843 856 ntBASIC4.53□□□□□ -1.68
RAB6CQ53S08 ZNF92P3-201ENST00000596594 954 ntBASIC4.53□□□□□ -1.68
RAB6CQ53S08 AC090948.1-201ENST00000607464 549 ntBASIC4.53□□□□□ -1.68
RAB6CQ53S08 MIR6748-201ENST00000610433 71 ntBASIC4.53□□□□□ -1.68
RAB6CQ53S08 CYCSP41-201ENST00000616920 296 ntBASIC4.53□□□□□ -1.68
RAB6CQ53S08 AL121890.3-201ENST00000618494 516 ntBASIC4.53□□□□□ -1.68
RAB6CQ53S08 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.53□□□□□ -1.68
RAB6CQ53S08 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RAB6CQ53S08 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC4.53□□□□□ -1.68
RAB6CQ53S08 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
RAB6CQ53S08 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RAB6CQ53S08 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
RAB6CQ53S08 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
RAB6CQ53S08 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.52□□□□□ -1.69
RAB6CQ53S08 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.52□□□□□ -1.69
RAB6CQ53S08 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.52□□□□□ -1.69
RAB6CQ53S08 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RAB6CQ53S08 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RAB6CQ53S08 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.52□□□□□ -1.69
RAB6CQ53S08 RNA5SP22-201ENST00000365393 109 ntBASIC4.52□□□□□ -1.69
RAB6CQ53S08 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
RAB6CQ53S08 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.52□□□□□ -1.69
RAB6CQ53S08 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC4.52□□□□□ -1.69
RAB6CQ53S08 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
RAB6CQ53S08 RNA5SP372-201ENST00000390836 115 ntBASIC4.52□□□□□ -1.69
RAB6CQ53S08 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RAB6CQ53S08 RN7SKP199-201ENST00000410325 305 ntBASIC4.52□□□□□ -1.69
RAB6CQ53S08 VDAC1P9-201ENST00000412766 841 ntBASIC4.52□□□□□ -1.69
RAB6CQ53S08 AC016769.2-201ENST00000414815 475 ntBASIC4.52□□□□□ -1.69
RAB6CQ53S08 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC4.52□□□□□ -1.69
RAB6CQ53S08 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4.52□□□□□ -1.69
RAB6CQ53S08 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms