Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AL136131.1-201ENST00000406079 803 ntBASIC4.75□□□□□ -1.65
GABPAQ06546 PGBD4P8-201ENST00000412993 562 ntBASIC4.75□□□□□ -1.65
GABPAQ06546 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.75□□□□□ -1.65
GABPAQ06546 RPL23AP4-201ENST00000427757 463 ntBASIC4.75□□□□□ -1.65
GABPAQ06546 HMGB3P5-201ENST00000428894 612 ntBASIC4.75□□□□□ -1.65
GABPAQ06546 AL353898.1-201ENST00000444055 238 ntBASIC4.75□□□□□ -1.65
GABPAQ06546 AC044797.1-201ENST00000445744 679 ntBASIC4.75□□□□□ -1.65
GABPAQ06546 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.75□□□□□ -1.65
GABPAQ06546 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.75□□□□□ -1.65
GABPAQ06546 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC4.75□□□□□ -1.65
GABPAQ06546 AC007537.2-201ENST00000472093 511 ntBASIC4.75□□□□□ -1.65
GABPAQ06546 NPM1P29-201ENST00000483112 803 ntBASIC4.75□□□□□ -1.65
GABPAQ06546 SSR3-208ENST00000496050 579 ntTSL 4 BASIC4.75□□□□□ -1.65
GABPAQ06546 AC146944.2-203ENST00000502493 354 ntBASIC4.75□□□□□ -1.65
GABPAQ06546 AC021146.7-201ENST00000509604 775 ntBASIC4.75□□□□□ -1.65
GABPAQ06546 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC4.75□□□□□ -1.65
GABPAQ06546 AC139495.1-202ENST00000513164 354 ntBASIC4.75□□□□□ -1.65
GABPAQ06546 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.75□□□□□ -1.65
GABPAQ06546 AC034244.2-201ENST00000514668 858 ntBASIC4.75□□□□□ -1.65
GABPAQ06546 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.75□□□□□ -1.65
GABPAQ06546 SNORA67.7-201ENST00000516664 135 ntBASIC4.75□□□□□ -1.65
GABPAQ06546 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.75□□□□□ -1.65
GABPAQ06546 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.75□□□□□ -1.65
GABPAQ06546 AC091516.1-201ENST00000549191 703 ntBASIC4.75□□□□□ -1.65
GABPAQ06546 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.75□□□□□ -1.65
GABPAQ06546 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.75□□□□□ -1.65
GABPAQ06546 AC012417.1-201ENST00000582307 1039 ntBASIC4.75□□□□□ -1.65
GABPAQ06546 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.75□□□□□ -1.65
GABPAQ06546 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.75□□□□□ -1.65
GABPAQ06546 AC245389.1-201ENST00000605141 529 ntBASIC4.75□□□□□ -1.65
GABPAQ06546 AC090246.1-201ENST00000616499 426 ntBASIC4.75□□□□□ -1.65
GABPAQ06546 AC099669.2-201ENST00000616549 437 ntBASIC4.75□□□□□ -1.65
GABPAQ06546 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.75□□□□□ -1.65
GABPAQ06546 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
GABPAQ06546 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
GABPAQ06546 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
GABPAQ06546 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
GABPAQ06546 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.74□□□□□ -1.65
GABPAQ06546 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.74□□□□□ -1.65
GABPAQ06546 BMS1P3-201ENST00000372011 932 ntBASIC4.74□□□□□ -1.65
GABPAQ06546 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
GABPAQ06546 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
GABPAQ06546 SNORA48.7-201ENST00000391302 135 ntBASIC4.74□□□□□ -1.65
GABPAQ06546 VDAC2P1-201ENST00000399358 958 ntBASIC4.74□□□□□ -1.65
GABPAQ06546 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.74□□□□□ -1.65
GABPAQ06546 RN7SKP199-201ENST00000410325 305 ntBASIC4.74□□□□□ -1.65
GABPAQ06546 RN7SKP202-201ENST00000410439 330 ntBASIC4.74□□□□□ -1.65
GABPAQ06546 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.74□□□□□ -1.65
GABPAQ06546 AL691517.1-201ENST00000440833 1235 ntBASIC4.74□□□□□ -1.65
GABPAQ06546 AC245517.2-201ENST00000442890 346 ntBASIC4.74□□□□□ -1.65
GABPAQ06546 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.74□□□□□ -1.65
GABPAQ06546 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.74□□□□□ -1.65
GABPAQ06546 AC007688.1-201ENST00000475592 759 ntBASIC4.74□□□□□ -1.65
GABPAQ06546 RPL21P129-201ENST00000491732 478 ntBASIC4.74□□□□□ -1.65
GABPAQ06546 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC4.74□□□□□ -1.65
GABPAQ06546 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.74□□□□□ -1.65
GABPAQ06546 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
GABPAQ06546 AC021146.3-201ENST00000511911 260 ntBASIC4.74□□□□□ -1.65
GABPAQ06546 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.74□□□□□ -1.65
GABPAQ06546 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC4.74□□□□□ -1.65
GABPAQ06546 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.74□□□□□ -1.65
GABPAQ06546 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC4.74□□□□□ -1.65
GABPAQ06546 AL731537.2-201ENST00000561565 951 ntBASIC4.74□□□□□ -1.65
GABPAQ06546 AC122134.1-201ENST00000565664 1104 ntBASIC4.74□□□□□ -1.65
GABPAQ06546 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.74□□□□□ -1.65
GABPAQ06546 AC079171.1-201ENST00000568788 914 ntBASIC4.74□□□□□ -1.65
GABPAQ06546 AC120057.2-201ENST00000571520 271 ntBASIC4.74□□□□□ -1.65
GABPAQ06546 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.74□□□□□ -1.65
GABPAQ06546 AC124856.1-201ENST00000600819 896 ntBASIC4.74□□□□□ -1.65
GABPAQ06546 AL356274.1-201ENST00000617064 410 ntBASIC4.74□□□□□ -1.65
GABPAQ06546 AC039056.2-201ENST00000622261 511 ntBASIC4.74□□□□□ -1.65
GABPAQ06546 AL354798.1-201ENST00000622505 329 ntBASIC4.74□□□□□ -1.65
GABPAQ06546 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
GABPAQ06546 AC008785.1-201ENST00000624475 456 ntBASIC4.74□□□□□ -1.65
GABPAQ06546 AL163152.1-201ENST00000642001 374 ntBASIC4.74□□□□□ -1.65
GABPAQ06546 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
GABPAQ06546 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
GABPAQ06546 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
GABPAQ06546 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.74□□□□□ -1.65
GABPAQ06546 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.74□□□□□ -1.65
GABPAQ06546 AC087190.4-201ENST00000574616 8334 ntBASIC4.74□□□□□ -1.65
GABPAQ06546 AC021242.1-201ENST00000507315 2035 ntBASIC4.73□□□□□ -1.65
GABPAQ06546 AL606537.1-201ENST00000607258 2011 ntBASIC4.73□□□□□ -1.65
GABPAQ06546 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.73□□□□□ -1.65
GABPAQ06546 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
GABPAQ06546 AC093775.1-201ENST00000624154 1868 ntBASIC4.73□□□□□ -1.65
GABPAQ06546 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.73□□□□□ -1.65
GABPAQ06546 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
GABPAQ06546 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.73□□□□□ -1.65
GABPAQ06546 RNA5SP399-201ENST00000364003 117 ntBASIC4.73□□□□□ -1.65
GABPAQ06546 CCNB2P1-201ENST00000399411 1150 ntBASIC4.73□□□□□ -1.65
GABPAQ06546 AC233289.1-201ENST00000403700 508 ntBASIC4.73□□□□□ -1.65
GABPAQ06546 HDGFP1-201ENST00000405943 252 ntBASIC4.73□□□□□ -1.65
GABPAQ06546 PDSS1P1-201ENST00000422953 1114 ntBASIC4.73□□□□□ -1.65
GABPAQ06546 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.73□□□□□ -1.65
GABPAQ06546 RPL7P2-201ENST00000427639 268 ntBASIC4.73□□□□□ -1.65
GABPAQ06546 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.73□□□□□ -1.65
GABPAQ06546 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
GABPAQ06546 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC4.73□□□□□ -1.65
GABPAQ06546 MTND2P21-201ENST00000436242 1042 ntBASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms