Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 AC114814.2-201ENST00000419195 485 ntBASIC4.46□□□□□ -1.7
CDK3Q00526 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CDK3Q00526 RAD23BP1-201ENST00000421404 1227 ntBASIC4.46□□□□□ -1.7
CDK3Q00526 RPL36AP10-201ENST00000421785 322 ntBASIC4.46□□□□□ -1.7
CDK3Q00526 Z74021.1-201ENST00000423610 407 ntBASIC4.46□□□□□ -1.7
CDK3Q00526 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC4.46□□□□□ -1.7
CDK3Q00526 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC4.46□□□□□ -1.7
CDK3Q00526 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CDK3Q00526 RPL34P6-201ENST00000432390 345 ntBASIC4.46□□□□□ -1.7
CDK3Q00526 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.46□□□□□ -1.7
CDK3Q00526 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.46□□□□□ -1.7
CDK3Q00526 NPM1P33-201ENST00000438918 872 ntBASIC4.46□□□□□ -1.7
CDK3Q00526 RPL23AP43-201ENST00000446445 471 ntBASIC4.46□□□□□ -1.7
CDK3Q00526 EIF2S2P2-201ENST00000447161 982 ntBASIC4.46□□□□□ -1.7
CDK3Q00526 AL050341.1-201ENST00000447743 313 ntBASIC4.46□□□□□ -1.7
CDK3Q00526 RPL7P32-201ENST00000457119 744 ntBASIC4.46□□□□□ -1.7
CDK3Q00526 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC4.46□□□□□ -1.7
CDK3Q00526 snoU109.3-201ENST00000459477 145 ntBASIC4.46□□□□□ -1.7
CDK3Q00526 AC006511.1-201ENST00000470614 315 ntBASIC4.46□□□□□ -1.7
CDK3Q00526 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.46□□□□□ -1.7
CDK3Q00526 AC025674.1-201ENST00000507074 324 ntBASIC4.46□□□□□ -1.7
CDK3Q00526 HPRT1P1-201ENST00000509498 657 ntBASIC4.46□□□□□ -1.7
CDK3Q00526 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CDK3Q00526 RNU6-276P-201ENST00000516114 96 ntBASIC4.46□□□□□ -1.7
CDK3Q00526 IGLVIV-65-201ENST00000517313 360 ntBASIC4.46□□□□□ -1.7
CDK3Q00526 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.46□□□□□ -1.7
CDK3Q00526 COX6B1P6-201ENST00000522347 255 ntBASIC4.46□□□□□ -1.7
CDK3Q00526 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC4.46□□□□□ -1.7
CDK3Q00526 AC021451.1-201ENST00000523498 1129 ntBASIC4.46□□□□□ -1.7
CDK3Q00526 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CDK3Q00526 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.46□□□□□ -1.7
CDK3Q00526 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.46□□□□□ -1.7
CDK3Q00526 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CDK3Q00526 AL390334.1-201ENST00000556395 450 ntBASIC4.46□□□□□ -1.7
CDK3Q00526 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC4.46□□□□□ -1.7
CDK3Q00526 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.46□□□□□ -1.7
CDK3Q00526 CYP2C60P-201ENST00000566088 139 ntBASIC4.46□□□□□ -1.7
CDK3Q00526 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CDK3Q00526 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CDK3Q00526 Z82195.1-201ENST00000604558 398 ntBASIC4.46□□□□□ -1.7
CDK3Q00526 BNIP3P4-201ENST00000604946 565 ntBASIC4.46□□□□□ -1.7
CDK3Q00526 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CDK3Q00526 AC090948.1-201ENST00000607464 549 ntBASIC4.46□□□□□ -1.7
CDK3Q00526 AC020634.1-201ENST00000608701 549 ntBASIC4.46□□□□□ -1.7
CDK3Q00526 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CDK3Q00526 AL035461.2-201ENST00000619201 524 ntBASIC4.46□□□□□ -1.7
CDK3Q00526 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC4.46□□□□□ -1.7
CDK3Q00526 CR392039.4-201ENST00000624968 501 ntBASIC4.46□□□□□ -1.7
CDK3Q00526 AP003485.1-201ENST00000625093 753 ntBASIC4.46□□□□□ -1.7
CDK3Q00526 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.46□□□□□ -1.7
CDK3Q00526 AC017104.5-201ENST00000637647 639 ntBASIC4.46□□□□□ -1.7
CDK3Q00526 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC4.46□□□□□ -1.7
CDK3Q00526 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CDK3Q00526 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CDK3Q00526 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.46□□□□□ -1.7
CDK3Q00526 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CDK3Q00526 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.46□□□□□ -1.7
CDK3Q00526 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
CDK3Q00526 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.45□□□□□ -1.7
CDK3Q00526 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CDK3Q00526 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.45□□□□□ -1.7
CDK3Q00526 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CDK3Q00526 AC021242.1-201ENST00000507315 2035 ntBASIC4.45□□□□□ -1.7
CDK3Q00526 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CDK3Q00526 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CDK3Q00526 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.45□□□□□ -1.7
CDK3Q00526 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CDK3Q00526 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
CDK3Q00526 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC4.45□□□□□ -1.7
CDK3Q00526 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
CDK3Q00526 MCTS2P-201ENST00000394552 546 ntBASIC4.45□□□□□ -1.7
CDK3Q00526 FCF1P5-201ENST00000406490 482 ntBASIC4.45□□□□□ -1.7
CDK3Q00526 SNORA11C-201ENST00000408532 129 ntBASIC4.45□□□□□ -1.7
CDK3Q00526 TRIM60P5Y-201ENST00000413946 574 ntBASIC4.45□□□□□ -1.7
CDK3Q00526 TMSB10P2-201ENST00000416049 131 ntBASIC4.45□□□□□ -1.7
CDK3Q00526 TAF13P2-201ENST00000416876 286 ntBASIC4.45□□□□□ -1.7
CDK3Q00526 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC4.45□□□□□ -1.7
CDK3Q00526 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC4.45□□□□□ -1.7
CDK3Q00526 AL592293.2-201ENST00000422292 996 ntBASIC4.45□□□□□ -1.7
CDK3Q00526 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CDK3Q00526 C4BPAP2-201ENST00000428434 478 ntBASIC4.45□□□□□ -1.7
CDK3Q00526 HMGB1P45-201ENST00000435986 653 ntBASIC4.45□□□□□ -1.7
CDK3Q00526 AL929288.2-201ENST00000446368 407 ntBASIC4.45□□□□□ -1.7
CDK3Q00526 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.45□□□□□ -1.7
CDK3Q00526 CDC42P1-201ENST00000456658 548 ntBASIC4.45□□□□□ -1.7
CDK3Q00526 RPL37P3-201ENST00000456825 293 ntBASIC4.45□□□□□ -1.7
CDK3Q00526 RNU7-140P-201ENST00000459546 60 ntBASIC4.45□□□□□ -1.7
CDK3Q00526 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.45□□□□□ -1.7
CDK3Q00526 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC4.45□□□□□ -1.7
CDK3Q00526 RPL23AP37-201ENST00000479658 549 ntBASIC4.45□□□□□ -1.7
CDK3Q00526 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.45□□□□□ -1.7
CDK3Q00526 IGBP1P5-201ENST00000507524 1000 ntBASIC4.45□□□□□ -1.7
CDK3Q00526 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.45□□□□□ -1.7
CDK3Q00526 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC4.45□□□□□ -1.7
CDK3Q00526 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC4.45□□□□□ -1.7
CDK3Q00526 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.45□□□□□ -1.7
CDK3Q00526 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC4.45□□□□□ -1.7
CDK3Q00526 AC018552.3-201ENST00000567416 561 ntBASIC4.45□□□□□ -1.7
CDK3Q00526 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
CDK3Q00526 RN7SL435P-201ENST00000584418 282 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms