Protein–RNA interactions for Protein: Q00403

GTF2B, Transcription initiation factor IIB, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2BQ00403 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
GTF2BQ00403 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
GTF2BQ00403 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
GTF2BQ00403 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
GTF2BQ00403 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
GTF2BQ00403 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.19□□□□□ -1.74
GTF2BQ00403 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
GTF2BQ00403 AC018529.3-201ENST00000624212 2254 ntBASIC4.19□□□□□ -1.74
GTF2BQ00403 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.19□□□□□ -1.74
GTF2BQ00403 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
GTF2BQ00403 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.19□□□□□ -1.74
GTF2BQ00403 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
GTF2BQ00403 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.19□□□□□ -1.74
GTF2BQ00403 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC4.19□□□□□ -1.74
GTF2BQ00403 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
GTF2BQ00403 HLFP1-201ENST00000402375 499 ntBASIC4.19□□□□□ -1.74
GTF2BQ00403 AL356967.1-201ENST00000406305 431 ntBASIC4.19□□□□□ -1.74
GTF2BQ00403 SNORA81-201ENST00000408493 178 ntBASIC4.19□□□□□ -1.74
GTF2BQ00403 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.19□□□□□ -1.74
GTF2BQ00403 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.19□□□□□ -1.74
GTF2BQ00403 OR5AW1P-201ENST00000426334 1006 ntBASIC4.19□□□□□ -1.74
GTF2BQ00403 YWHAEP5-201ENST00000431545 765 ntBASIC4.19□□□□□ -1.74
GTF2BQ00403 AL356535.1-201ENST00000440335 398 ntBASIC4.19□□□□□ -1.74
GTF2BQ00403 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC4.19□□□□□ -1.74
GTF2BQ00403 YWHAQP9-201ENST00000445891 512 ntBASIC4.19□□□□□ -1.74
GTF2BQ00403 AL500522.2-201ENST00000448562 343 ntBASIC4.19□□□□□ -1.74
GTF2BQ00403 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.19□□□□□ -1.74
GTF2BQ00403 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.19□□□□□ -1.74
GTF2BQ00403 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC4.19□□□□□ -1.74
GTF2BQ00403 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.19□□□□□ -1.74
GTF2BQ00403 AC069499.1-201ENST00000489433 509 ntBASIC4.19□□□□□ -1.74
GTF2BQ00403 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC4.19□□□□□ -1.74
GTF2BQ00403 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
GTF2BQ00403 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.19□□□□□ -1.74
GTF2BQ00403 RAC1P2-201ENST00000511164 579 ntBASIC4.19□□□□□ -1.74
GTF2BQ00403 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
GTF2BQ00403 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
GTF2BQ00403 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.19□□□□□ -1.74
GTF2BQ00403 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
GTF2BQ00403 MIR5685-201ENST00000579080 79 ntBASIC4.19□□□□□ -1.74
GTF2BQ00403 AL133247.2-201ENST00000603236 482 ntBASIC4.19□□□□□ -1.74
GTF2BQ00403 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
GTF2BQ00403 AL137849.1-201ENST00000604767 169 ntBASIC4.19□□□□□ -1.74
GTF2BQ00403 AL451086.1-201ENST00000605596 223 ntBASIC4.19□□□□□ -1.74
GTF2BQ00403 AC090912.3-201ENST00000609775 533 ntBASIC4.19□□□□□ -1.74
GTF2BQ00403 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
GTF2BQ00403 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
GTF2BQ00403 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
GTF2BQ00403 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
GTF2BQ00403 AC079684.1-201ENST00000621405 437 ntBASIC4.19□□□□□ -1.74
GTF2BQ00403 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.19□□□□□ -1.74
GTF2BQ00403 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.19□□□□□ -1.74
GTF2BQ00403 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.19□□□□□ -1.74
GTF2BQ00403 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
GTF2BQ00403 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
GTF2BQ00403 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
GTF2BQ00403 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.19□□□□□ -1.74
GTF2BQ00403 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.18□□□□□ -1.74
GTF2BQ00403 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
GTF2BQ00403 AC018555.1-201ENST00000567548 1980 ntBASIC4.18□□□□□ -1.74
GTF2BQ00403 AC107027.3-201ENST00000565095 3473 ntBASIC4.18□□□□□ -1.74
GTF2BQ00403 GCNT6-201ENST00000379591 934 ntBASIC4.18□□□□□ -1.74
GTF2BQ00403 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
GTF2BQ00403 MIR708-201ENST00000390708 88 ntBASIC4.18□□□□□ -1.74
GTF2BQ00403 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.18□□□□□ -1.74
GTF2BQ00403 IPMKP1-201ENST00000425988 855 ntBASIC4.18□□□□□ -1.74
GTF2BQ00403 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC4.18□□□□□ -1.74
GTF2BQ00403 AL390879.2-203ENST00000426943 1121 ntBASIC4.18□□□□□ -1.74
GTF2BQ00403 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.18□□□□□ -1.74
GTF2BQ00403 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC4.18□□□□□ -1.74
GTF2BQ00403 AL121877.1-201ENST00000453704 622 ntBASIC4.18□□□□□ -1.74
GTF2BQ00403 UBDP1-202ENST00000457888 382 ntBASIC4.18□□□□□ -1.74
GTF2BQ00403 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.18□□□□□ -1.74
GTF2BQ00403 GAPDHP36-201ENST00000480688 918 ntBASIC4.18□□□□□ -1.74
GTF2BQ00403 RPS6P4-201ENST00000494693 758 ntBASIC4.18□□□□□ -1.74
GTF2BQ00403 AC111000.5-201ENST00000506559 1178 ntBASIC4.18□□□□□ -1.74
GTF2BQ00403 RN7SKP141-201ENST00000516167 338 ntBASIC4.18□□□□□ -1.74
GTF2BQ00403 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.18□□□□□ -1.74
GTF2BQ00403 SUMO2P20-201ENST00000520803 283 ntBASIC4.18□□□□□ -1.74
GTF2BQ00403 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.18□□□□□ -1.74
GTF2BQ00403 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.18□□□□□ -1.74
GTF2BQ00403 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
GTF2BQ00403 AC087499.8-201ENST00000578406 226 ntBASIC4.18□□□□□ -1.74
GTF2BQ00403 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.18□□□□□ -1.74
GTF2BQ00403 SNORA62.6-201ENST00000606322 83 ntBASIC4.18□□□□□ -1.74
GTF2BQ00403 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.18□□□□□ -1.74
GTF2BQ00403 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.18□□□□□ -1.74
GTF2BQ00403 BMS1P21-201ENST00000634565 365 ntBASIC4.18□□□□□ -1.74
GTF2BQ00403 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.18□□□□□ -1.74
GTF2BQ00403 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
GTF2BQ00403 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.18□□□□□ -1.74
GTF2BQ00403 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.17□□□□□ -1.74
GTF2BQ00403 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
GTF2BQ00403 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
GTF2BQ00403 AC093535.2-201ENST00000624769 2326 ntBASIC4.17□□□□□ -1.74
GTF2BQ00403 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
GTF2BQ00403 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
GTF2BQ00403 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
GTF2BQ00403 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
GTF2BQ00403 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms