Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 Z99714.1-201ENST00000450463 807 ntBASIC4□□□□□ -1.77
CX3CL1P78423 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC4□□□□□ -1.77
CX3CL1P78423 AC005532.2-201ENST00000467154 373 ntBASIC4□□□□□ -1.77
CX3CL1P78423 AC074386.1-201ENST00000476560 767 ntBASIC4□□□□□ -1.77
CX3CL1P78423 AC090686.1-201ENST00000481577 749 ntBASIC4□□□□□ -1.77
CX3CL1P78423 RN7SL727P-201ENST00000482164 296 ntBASIC4□□□□□ -1.77
CX3CL1P78423 RN7SL244P-201ENST00000493405 297 ntBASIC4□□□□□ -1.77
CX3CL1P78423 AC073073.1-201ENST00000493920 463 ntBASIC4□□□□□ -1.77
CX3CL1P78423 AC021146.5-201ENST00000503544 545 ntBASIC4□□□□□ -1.77
CX3CL1P78423 AC091951.3-201ENST00000504093 246 ntBASIC4□□□□□ -1.77
CX3CL1P78423 AC098862.1-201ENST00000504991 413 ntBASIC4□□□□□ -1.77
CX3CL1P78423 PRELID3BP5-201ENST00000508612 460 ntBASIC4□□□□□ -1.77
CX3CL1P78423 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4□□□□□ -1.77
CX3CL1P78423 RN7SKP66-201ENST00000516681 231 ntBASIC4□□□□□ -1.77
CX3CL1P78423 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC4□□□□□ -1.77
CX3CL1P78423 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC4□□□□□ -1.77
CX3CL1P78423 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC4□□□□□ -1.77
CX3CL1P78423 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4□□□□□ -1.77
CX3CL1P78423 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC4□□□□□ -1.77
CX3CL1P78423 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC4□□□□□ -1.77
CX3CL1P78423 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
CX3CL1P78423 NMNAT1P1-201ENST00000554095 876 ntBASIC4□□□□□ -1.77
CX3CL1P78423 AC090695.1-201ENST00000561269 1222 ntBASIC4□□□□□ -1.77
CX3CL1P78423 EIF5A2P1-201ENST00000564027 460 ntBASIC4□□□□□ -1.77
CX3CL1P78423 MIR3691-201ENST00000578066 90 ntBASIC4□□□□□ -1.77
CX3CL1P78423 AC006116.3-201ENST00000592968 361 ntBASIC4□□□□□ -1.77
CX3CL1P78423 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4□□□□□ -1.77
CX3CL1P78423 AC105254.2-201ENST00000603636 436 ntBASIC4□□□□□ -1.77
CX3CL1P78423 AC107075.1-201ENST00000613695 314 ntBASIC4□□□□□ -1.77
CX3CL1P78423 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CX3CL1P78423 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC4□□□□□ -1.77
CX3CL1P78423 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC4□□□□□ -1.77
CX3CL1P78423 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4□□□□□ -1.77
CX3CL1P78423 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4□□□□□ -1.77
CX3CL1P78423 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4□□□□□ -1.77
CX3CL1P78423 AF001550.2-201ENST00000636643 217 ntBASIC4□□□□□ -1.77
CX3CL1P78423 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC4□□□□□ -1.77
CX3CL1P78423 LINC01739-205ENST00000641890 573 ntBASIC4□□□□□ -1.77
CX3CL1P78423 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
CX3CL1P78423 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
CX3CL1P78423 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
CX3CL1P78423 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4□□□□□ -1.77
CX3CL1P78423 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4□□□□□ -1.77
CX3CL1P78423 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
CX3CL1P78423 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC4□□□□□ -1.77
CX3CL1P78423 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4□□□□□ -1.77
CX3CL1P78423 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4□□□□□ -1.77
CX3CL1P78423 XPOTP1-201ENST00000443317 2398 ntBASIC3.99□□□□□ -1.77
CX3CL1P78423 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC3.99□□□□□ -1.77
CX3CL1P78423 MAPK10-349ENST00000641767 3661 ntBASIC3.99□□□□□ -1.77
CX3CL1P78423 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CX3CL1P78423 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
CX3CL1P78423 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
CX3CL1P78423 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
CX3CL1P78423 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC3.99□□□□□ -1.77
CX3CL1P78423 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CX3CL1P78423 U8.4-201ENST00000363626 134 ntBASIC3.99□□□□□ -1.77
CX3CL1P78423 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
CX3CL1P78423 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.99□□□□□ -1.77
CX3CL1P78423 AL590084.1-201ENST00000407885 387 ntBASIC3.99□□□□□ -1.77
CX3CL1P78423 MIR1178-201ENST00000408396 91 ntBASIC3.99□□□□□ -1.77
CX3CL1P78423 SNORA77-201ENST00000408716 125 ntBASIC3.99□□□□□ -1.77
CX3CL1P78423 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.99□□□□□ -1.77
CX3CL1P78423 RN7SKP278-201ENST00000410504 342 ntBASIC3.99□□□□□ -1.77
CX3CL1P78423 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC3.99□□□□□ -1.77
CX3CL1P78423 AC004022.2-201ENST00000413824 193 ntBASIC3.99□□□□□ -1.77
CX3CL1P78423 RPS24P7-201ENST00000416921 246 ntBASIC3.99□□□□□ -1.77
CX3CL1P78423 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC3.99□□□□□ -1.77
CX3CL1P78423 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.99□□□□□ -1.77
CX3CL1P78423 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.99□□□□□ -1.77
CX3CL1P78423 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC3.99□□□□□ -1.77
CX3CL1P78423 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC3.99□□□□□ -1.77
CX3CL1P78423 AC010881.1-201ENST00000433830 235 ntBASIC3.99□□□□□ -1.77
CX3CL1P78423 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC3.99□□□□□ -1.77
CX3CL1P78423 SEPT7P5-201ENST00000434048 306 ntBASIC3.99□□□□□ -1.77
CX3CL1P78423 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.99□□□□□ -1.77
CX3CL1P78423 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.99□□□□□ -1.77
CX3CL1P78423 AC092393.1-201ENST00000439625 742 ntBASIC3.99□□□□□ -1.77
CX3CL1P78423 AC093155.1-201ENST00000440164 826 ntBASIC3.99□□□□□ -1.77
CX3CL1P78423 RPS29P9-201ENST00000440360 171 ntBASIC3.99□□□□□ -1.77
CX3CL1P78423 RPL23AP76-201ENST00000441860 458 ntBASIC3.99□□□□□ -1.77
CX3CL1P78423 RPL7AP61-201ENST00000443410 636 ntBASIC3.99□□□□□ -1.77
CX3CL1P78423 RPL7L1P1-201ENST00000448259 785 ntBASIC3.99□□□□□ -1.77
CX3CL1P78423 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CX3CL1P78423 IGHV5-78-201ENST00000450948 295 ntBASIC3.99□□□□□ -1.77
CX3CL1P78423 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC3.99□□□□□ -1.77
CX3CL1P78423 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CX3CL1P78423 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC3.99□□□□□ -1.77
CX3CL1P78423 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.99□□□□□ -1.77
CX3CL1P78423 AC008953.1-201ENST00000497334 318 ntBASIC3.99□□□□□ -1.77
CX3CL1P78423 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC3.99□□□□□ -1.77
CX3CL1P78423 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC3.99□□□□□ -1.77
CX3CL1P78423 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC3.99□□□□□ -1.77
CX3CL1P78423 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC3.99□□□□□ -1.77
CX3CL1P78423 COX6B1P5-201ENST00000509843 249 ntBASIC3.99□□□□□ -1.77
CX3CL1P78423 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.99□□□□□ -1.77
CX3CL1P78423 RNU6-488P-201ENST00000515918 99 ntBASIC3.99□□□□□ -1.77
CX3CL1P78423 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC3.99□□□□□ -1.77
CX3CL1P78423 MRPS36P3-201ENST00000519284 130 ntBASIC3.99□□□□□ -1.77
CX3CL1P78423 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms