Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
CCNA1P78396 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CCNA1P78396 AC106871.1-201ENST00000568324 3102 ntBASIC4.75□□□□□ -1.65
CCNA1P78396 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
CCNA1P78396 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CCNA1P78396 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
CCNA1P78396 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CCNA1P78396 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.75□□□□□ -1.65
CCNA1P78396 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CCNA1P78396 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.75□□□□□ -1.65
CCNA1P78396 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CCNA1P78396 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
CCNA1P78396 MIR449B-201ENST00000384995 97 ntBASIC4.75□□□□□ -1.65
CCNA1P78396 SNORD66.1-201ENST00000391230 76 ntBASIC4.75□□□□□ -1.65
CCNA1P78396 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.75□□□□□ -1.65
CCNA1P78396 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.75□□□□□ -1.65
CCNA1P78396 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CCNA1P78396 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.75□□□□□ -1.65
CCNA1P78396 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.75□□□□□ -1.65
CCNA1P78396 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC4.75□□□□□ -1.65
CCNA1P78396 SERPINA7P1-201ENST00000443077 631 ntBASIC4.75□□□□□ -1.65
CCNA1P78396 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CCNA1P78396 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CCNA1P78396 C1DP3-201ENST00000455013 423 ntBASIC4.75□□□□□ -1.65
CCNA1P78396 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.75□□□□□ -1.65
CCNA1P78396 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC4.75□□□□□ -1.65
CCNA1P78396 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.75□□□□□ -1.65
CCNA1P78396 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.75□□□□□ -1.65
CCNA1P78396 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.75□□□□□ -1.65
CCNA1P78396 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.75□□□□□ -1.65
CCNA1P78396 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.75□□□□□ -1.65
CCNA1P78396 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.75□□□□□ -1.65
CCNA1P78396 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.75□□□□□ -1.65
CCNA1P78396 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.75□□□□□ -1.65
CCNA1P78396 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.75□□□□□ -1.65
CCNA1P78396 MTCO2P22-201ENST00000603246 681 ntBASIC4.75□□□□□ -1.65
CCNA1P78396 AC117490.2-201ENST00000610042 594 ntBASIC4.75□□□□□ -1.65
CCNA1P78396 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
CCNA1P78396 AP001002.1-201ENST00000625148 1513 ntBASIC4.75□□□□□ -1.65
CCNA1P78396 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CCNA1P78396 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.75□□□□□ -1.65
CCNA1P78396 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CCNA1P78396 AC087565.3-202ENST00000642085 1603 ntBASIC4.75□□□□□ -1.65
CCNA1P78396 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.75□□□□□ -1.65
CCNA1P78396 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.75□□□□□ -1.65
CCNA1P78396 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CCNA1P78396 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.74□□□□□ -1.65
CCNA1P78396 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
CCNA1P78396 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CCNA1P78396 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.74□□□□□ -1.65
CCNA1P78396 MIR92A2-201ENST00000385299 75 ntBASIC4.74□□□□□ -1.65
CCNA1P78396 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
CCNA1P78396 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.74□□□□□ -1.65
CCNA1P78396 UBTFL3-201ENST00000418934 1024 ntBASIC4.74□□□□□ -1.65
CCNA1P78396 AL445584.1-201ENST00000431451 330 ntBASIC4.74□□□□□ -1.65
CCNA1P78396 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.74□□□□□ -1.65
CCNA1P78396 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.74□□□□□ -1.65
CCNA1P78396 AC239809.1-201ENST00000450470 217 ntBASIC4.74□□□□□ -1.65
CCNA1P78396 AL445433.1-201ENST00000457507 257 ntBASIC4.74□□□□□ -1.65
CCNA1P78396 AC104629.2-201ENST00000468627 598 ntBASIC4.74□□□□□ -1.65
CCNA1P78396 UBTFL6-201ENST00000477929 1024 ntBASIC4.74□□□□□ -1.65
CCNA1P78396 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
CCNA1P78396 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC4.74□□□□□ -1.65
CCNA1P78396 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.74□□□□□ -1.65
CCNA1P78396 PAICSP4-201ENST00000517543 1253 ntBASIC4.74□□□□□ -1.65
CCNA1P78396 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.74□□□□□ -1.65
CCNA1P78396 AC022882.1-201ENST00000532142 501 ntBASIC4.74□□□□□ -1.65
CCNA1P78396 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.74□□□□□ -1.65
CCNA1P78396 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.74□□□□□ -1.65
CCNA1P78396 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.74□□□□□ -1.65
CCNA1P78396 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.74□□□□□ -1.65
CCNA1P78396 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.74□□□□□ -1.65
CCNA1P78396 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CCNA1P78396 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CCNA1P78396 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.74□□□□□ -1.65
CCNA1P78396 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.74□□□□□ -1.65
CCNA1P78396 AL589935.2-201ENST00000616471 1231 ntBASIC4.74□□□□□ -1.65
CCNA1P78396 AL354798.1-201ENST00000622505 329 ntBASIC4.74□□□□□ -1.65
CCNA1P78396 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CCNA1P78396 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CCNA1P78396 FAM91A3P-201ENST00000456826 2544 ntBASIC4.74□□□□□ -1.65
CCNA1P78396 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.74□□□□□ -1.65
CCNA1P78396 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
CCNA1P78396 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.74□□□□□ -1.65
CCNA1P78396 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCNA1P78396 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCNA1P78396 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.73□□□□□ -1.65
CCNA1P78396 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CCNA1P78396 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
CCNA1P78396 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.73□□□□□ -1.65
CCNA1P78396 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.73□□□□□ -1.65
CCNA1P78396 OR5BE1P-201ENST00000425977 939 ntBASIC4.73□□□□□ -1.65
CCNA1P78396 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.73□□□□□ -1.65
CCNA1P78396 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.73□□□□□ -1.65
CCNA1P78396 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC4.73□□□□□ -1.65
CCNA1P78396 AL139099.1-201ENST00000497398 403 ntBASIC4.73□□□□□ -1.65
CCNA1P78396 BNIP3P41-201ENST00000503774 571 ntBASIC4.73□□□□□ -1.65
CCNA1P78396 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.73□□□□□ -1.65
CCNA1P78396 RNU6-347P-201ENST00000516658 105 ntBASIC4.73□□□□□ -1.65
CCNA1P78396 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms