Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC2.55□□□□□ -2
RPL39P62891 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC2.55□□□□□ -2
RPL39P62891 AC023141.6-201ENST00000429418 337 ntBASIC2.55□□□□□ -2
RPL39P62891 BX679664.1-201ENST00000434429 253 ntBASIC2.55□□□□□ -2
RPL39P62891 AL772161.1-201ENST00000439130 476 ntBASIC2.55□□□□□ -2
RPL39P62891 AL645931.1-201ENST00000439737 410 ntBASIC2.55□□□□□ -2
RPL39P62891 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC2.55□□□□□ -2
RPL39P62891 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC2.55□□□□□ -2
RPL39P62891 RPS3AP46-201ENST00000448352 682 ntBASIC2.55□□□□□ -2
RPL39P62891 NPM1P39-201ENST00000449818 867 ntBASIC2.55□□□□□ -2
RPL39P62891 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC2.55□□□□□ -2
RPL39P62891 ANP32BP2-201ENST00000454525 545 ntBASIC2.55□□□□□ -2
RPL39P62891 RPL7AP52-201ENST00000458096 790 ntBASIC2.55□□□□□ -2
RPL39P62891 OR9M1P-201ENST00000459641 921 ntBASIC2.55□□□□□ -2
RPL39P62891 AC010468.1-201ENST00000461022 817 ntBASIC2.55□□□□□ -2
RPL39P62891 RPL7P48-201ENST00000461513 746 ntBASIC2.55□□□□□ -2
RPL39P62891 AC010401.1-201ENST00000463867 348 ntBASIC2.55□□□□□ -2
RPL39P62891 AC084357.1-201ENST00000473404 255 ntBASIC2.55□□□□□ -2
RPL39P62891 AP003730.1-201ENST00000524605 285 ntBASIC2.55□□□□□ -2
RPL39P62891 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC2.55□□□□□ -2
RPL39P62891 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC2.55□□□□□ -2
RPL39P62891 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC2.55□□□□□ -2
RPL39P62891 HYKK-203ENST00000563233 734 ntTSL 2 BASIC2.55□□□□□ -2
RPL39P62891 AC010547.7-201ENST00000570323 333 ntBASIC2.55□□□□□ -2
RPL39P62891 AC027281.1-201ENST00000574178 758 ntBASIC2.55□□□□□ -2
RPL39P62891 MIR4277-201ENST00000578298 84 ntBASIC2.55□□□□□ -2
RPL39P62891 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC2.55□□□□□ -2
RPL39P62891 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC2.55□□□□□ -2
RPL39P62891 AL592436.1-201ENST00000605135 558 ntBASIC2.55□□□□□ -2
RPL39P62891 AC024940.4-201ENST00000605507 246 ntBASIC2.55□□□□□ -2
RPL39P62891 AP000894.4-201ENST00000610185 483 ntBASIC2.55□□□□□ -2
RPL39P62891 AC022149.2-201ENST00000621061 203 ntBASIC2.55□□□□□ -2
RPL39P62891 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC2.55□□□□□ -2
RPL39P62891 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC2.55□□□□□ -2
RPL39P62891 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC2.55□□□□□ -2
RPL39P62891 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC2.55□□□□□ -2
RPL39P62891 OR11H5P-202ENST00000641612 1325 ntBASIC2.55□□□□□ -2
RPL39P62891 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC2.55□□□□□ -2
RPL39P62891 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC2.55□□□□□ -2
RPL39P62891 AP001486.2-201ENST00000561652 5113 ntBASIC2.55□□□□□ -2
RPL39P62891 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC2.55□□□□□ -2
RPL39P62891 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC2.55□□□□□ -2
RPL39P62891 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC2.55□□□□□ -2
RPL39P62891 AC068647.1-201ENST00000489539 2265 ntBASIC2.54□□□□□ -2
RPL39P62891 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC2.54□□□□□ -2
RPL39P62891 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
RPL39P62891 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC2.54□□□□□ -2
RPL39P62891 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
RPL39P62891 AC100871.1-201ENST00000507871 1456 ntBASIC2.54□□□□□ -2
RPL39P62891 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
RPL39P62891 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
RPL39P62891 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC2.54□□□□□ -2
RPL39P62891 MIR192-201ENST00000384915 110 ntBASIC2.54□□□□□ -2
RPL39P62891 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC2.54□□□□□ -2
RPL39P62891 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC2.54□□□□□ -2
RPL39P62891 CYB5AP4-201ENST00000396692 399 ntBASIC2.54□□□□□ -2
RPL39P62891 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC2.54□□□□□ -2
RPL39P62891 MTHFD2P2-201ENST00000407725 247 ntBASIC2.54□□□□□ -2
RPL39P62891 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC2.54□□□□□ -2
RPL39P62891 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC2.54□□□□□ -2
RPL39P62891 MTND4P22-201ENST00000413116 1169 ntBASIC2.54□□□□□ -2
RPL39P62891 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC2.54□□□□□ -2
RPL39P62891 OSTCP5-201ENST00000425293 453 ntBASIC2.54□□□□□ -2
RPL39P62891 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC2.54□□□□□ -2
RPL39P62891 MTND6P18-201ENST00000439477 513 ntBASIC2.54□□□□□ -2
RPL39P62891 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC2.54□□□□□ -2
RPL39P62891 SETD6P1-201ENST00000444575 317 ntBASIC2.54□□□□□ -2
RPL39P62891 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC2.54□□□□□ -2
RPL39P62891 AC010655.1-201ENST00000449336 292 ntBASIC2.54□□□□□ -2
RPL39P62891 AL591363.1-201ENST00000450091 483 ntBASIC2.54□□□□□ -2
RPL39P62891 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC2.54□□□□□ -2
RPL39P62891 CYCSP53-201ENST00000455540 265 ntBASIC2.54□□□□□ -2
RPL39P62891 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC2.54□□□□□ -2
RPL39P62891 RPS4XP2-201ENST00000458402 793 ntBASIC2.54□□□□□ -2
RPL39P62891 AC020893.1-201ENST00000502452 580 ntBASIC2.54□□□□□ -2
RPL39P62891 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC2.54□□□□□ -2
RPL39P62891 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC2.54□□□□□ -2
RPL39P62891 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC2.54□□□□□ -2
RPL39P62891 AP006245.1-201ENST00000522549 120 ntBASIC2.54□□□□□ -2
RPL39P62891 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC2.54□□□□□ -2
RPL39P62891 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC2.54□□□□□ -2
RPL39P62891 AC120057.2-201ENST00000571520 271 ntBASIC2.54□□□□□ -2
RPL39P62891 MIR3138-201ENST00000585238 82 ntBASIC2.54□□□□□ -2
RPL39P62891 AC022146.1-201ENST00000595307 847 ntBASIC2.54□□□□□ -2
RPL39P62891 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
RPL39P62891 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC2.54□□□□□ -2
RPL39P62891 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
RPL39P62891 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
RPL39P62891 AC009704.2-201ENST00000618739 483 ntBASIC2.54□□□□□ -2
RPL39P62891 AL357559.1-201ENST00000622228 274 ntBASIC2.54□□□□□ -2
RPL39P62891 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC2.54□□□□□ -2
RPL39P62891 MIR7153-201ENST00000637758 57 ntBASIC2.54□□□□□ -2
RPL39P62891 AP000553.6-201ENST00000641242 118 ntBASIC2.54□□□□□ -2
RPL39P62891 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC2.54□□□□□ -2
RPL39P62891 AL021368.2-201ENST00000606125 5352 ntBASIC2.54□□□□□ -2
RPL39P62891 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC2.54□□□□□ -2
RPL39P62891 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
RPL39P62891 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
RPL39P62891 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC2.54□□□□□ -2
RPL39P62891 AL513302.2-201ENST00000562313 1842 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms