Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.31□□□□□ -1.88
LSM3P62310 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.31□□□□□ -1.88
LSM3P62310 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
LSM3P62310 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
LSM3P62310 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LSM3P62310 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.31□□□□□ -1.88
LSM3P62310 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
LSM3P62310 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
LSM3P62310 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
LSM3P62310 AC007656.2-201ENST00000624902 4547 ntBASIC3.3□□□□□ -1.88
LSM3P62310 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
LSM3P62310 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LSM3P62310 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LSM3P62310 MIR199A2-201ENST00000385289 110 ntBASIC3.3□□□□□ -1.88
LSM3P62310 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC3.3□□□□□ -1.88
LSM3P62310 AC009302.1-201ENST00000417147 390 ntBASIC3.3□□□□□ -1.88
LSM3P62310 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
LSM3P62310 Z74696.2-201ENST00000436514 498 ntBASIC3.3□□□□□ -1.88
LSM3P62310 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC3.3□□□□□ -1.88
LSM3P62310 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
LSM3P62310 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.3□□□□□ -1.88
LSM3P62310 AC009963.2-201ENST00000453431 138 ntBASIC3.3□□□□□ -1.88
LSM3P62310 RPS4XP2-201ENST00000458402 793 ntBASIC3.3□□□□□ -1.88
LSM3P62310 RPL21P11-201ENST00000461458 483 ntBASIC3.3□□□□□ -1.88
LSM3P62310 AC087312.1-201ENST00000471411 480 ntBASIC3.3□□□□□ -1.88
LSM3P62310 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.3□□□□□ -1.88
LSM3P62310 TRBV8-2-201ENST00000475637 270 ntBASIC3.3□□□□□ -1.88
LSM3P62310 RPL7P47-201ENST00000497299 556 ntBASIC3.3□□□□□ -1.88
LSM3P62310 AC020893.1-201ENST00000502452 580 ntBASIC3.3□□□□□ -1.88
LSM3P62310 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
LSM3P62310 AC106872.4-201ENST00000510050 523 ntBASIC3.3□□□□□ -1.88
LSM3P62310 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.3□□□□□ -1.88
LSM3P62310 AC022695.1-201ENST00000522089 237 ntBASIC3.3□□□□□ -1.88
LSM3P62310 IGKV3D-34-201ENST00000522638 302 ntBASIC3.3□□□□□ -1.88
LSM3P62310 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
LSM3P62310 AC008011.1-201ENST00000545989 227 ntBASIC3.3□□□□□ -1.88
LSM3P62310 AC008147.3-201ENST00000548666 354 ntBASIC3.3□□□□□ -1.88
LSM3P62310 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC3.3□□□□□ -1.88
LSM3P62310 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC3.3□□□□□ -1.88
LSM3P62310 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
LSM3P62310 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.3□□□□□ -1.88
LSM3P62310 BNIP3P38-201ENST00000601117 544 ntBASIC3.3□□□□□ -1.88
LSM3P62310 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.3□□□□□ -1.88
LSM3P62310 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.3□□□□□ -1.88
LSM3P62310 AC092653.1-201ENST00000608509 531 ntBASIC3.3□□□□□ -1.88
LSM3P62310 AL450489.1-201ENST00000612071 468 ntBASIC3.3□□□□□ -1.88
LSM3P62310 AP006248.2-201ENST00000623309 592 ntBASIC3.3□□□□□ -1.88
LSM3P62310 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.3□□□□□ -1.88
LSM3P62310 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LSM3P62310 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
LSM3P62310 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LSM3P62310 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
LSM3P62310 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.3□□□□□ -1.88
LSM3P62310 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
LSM3P62310 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
LSM3P62310 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LSM3P62310 MAPK10-372ENST00000641954 3413 ntBASIC3.29□□□□□ -1.88
LSM3P62310 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC3.29□□□□□ -1.88
LSM3P62310 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC3.29□□□□□ -1.88
LSM3P62310 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LSM3P62310 AC109780.1-201ENST00000451768 1344 ntBASIC3.29□□□□□ -1.88
LSM3P62310 RNA5SP42-201ENST00000364278 115 ntBASIC3.29□□□□□ -1.88
LSM3P62310 AC136624.1-201ENST00000400791 413 ntBASIC3.29□□□□□ -1.88
LSM3P62310 HYKK-202ENST00000408962 847 ntTSL 5 BASIC3.29□□□□□ -1.88
LSM3P62310 TPT1P2-201ENST00000413105 503 ntBASIC3.29□□□□□ -1.88
LSM3P62310 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC3.29□□□□□ -1.88
LSM3P62310 AL590806.1-201ENST00000415818 853 ntBASIC3.29□□□□□ -1.88
LSM3P62310 AIMP1P1-201ENST00000418670 937 ntBASIC3.29□□□□□ -1.88
LSM3P62310 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC3.29□□□□□ -1.88
LSM3P62310 BTF3P10-201ENST00000433415 495 ntBASIC3.29□□□□□ -1.88
LSM3P62310 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.29□□□□□ -1.88
LSM3P62310 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.29□□□□□ -1.88
LSM3P62310 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC3.29□□□□□ -1.88
LSM3P62310 RPL23AP24-201ENST00000458203 385 ntBASIC3.29□□□□□ -1.88
LSM3P62310 AC041039.1-201ENST00000485656 536 ntBASIC3.29□□□□□ -1.88
LSM3P62310 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC3.29□□□□□ -1.88
LSM3P62310 OR5M14P-201ENST00000506803 618 ntBASIC3.29□□□□□ -1.88
LSM3P62310 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.29□□□□□ -1.88
LSM3P62310 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC3.29□□□□□ -1.88
LSM3P62310 YPEL5P3-201ENST00000547227 352 ntBASIC3.29□□□□□ -1.88
LSM3P62310 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC3.29□□□□□ -1.88
LSM3P62310 PCNPP1-201ENST00000552501 511 ntBASIC3.29□□□□□ -1.88
LSM3P62310 AC006960.3-201ENST00000561845 705 ntBASIC3.29□□□□□ -1.88
LSM3P62310 HYKK-203ENST00000563233 734 ntTSL 2 BASIC3.29□□□□□ -1.88
LSM3P62310 AC037471.2-201ENST00000564941 598 ntBASIC3.29□□□□□ -1.88
LSM3P62310 AC012146.2-201ENST00000576545 416 ntBASIC3.29□□□□□ -1.88
LSM3P62310 MIR4646-201ENST00000580775 63 ntBASIC3.29□□□□□ -1.88
LSM3P62310 MIR4270-201ENST00000581799 70 ntBASIC3.29□□□□□ -1.88
LSM3P62310 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC3.29□□□□□ -1.88
LSM3P62310 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC3.29□□□□□ -1.88
LSM3P62310 AC011492.1-201ENST00000600023 315 ntBASIC3.29□□□□□ -1.88
LSM3P62310 AC115621.1-201ENST00000604653 858 ntBASIC3.29□□□□□ -1.88
LSM3P62310 AL163642.2-201ENST00000604722 1019 ntBASIC3.29□□□□□ -1.88
LSM3P62310 AL354760.1-201ENST00000608357 643 ntBASIC3.29□□□□□ -1.88
LSM3P62310 AC090510.2-201ENST00000617465 629 ntBASIC3.29□□□□□ -1.88
LSM3P62310 AL357559.1-201ENST00000622228 274 ntBASIC3.29□□□□□ -1.88
LSM3P62310 CDRT1-208ENST00000630868 794 ntBASIC3.29□□□□□ -1.88
LSM3P62310 MIR6715B-201ENST00000637172 77 ntBASIC3.29□□□□□ -1.88
LSM3P62310 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LSM3P62310 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms