Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
VBP1P61758 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
VBP1P61758 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
VBP1P61758 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
VBP1P61758 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.61□□□□□ -1.83
VBP1P61758 AC021755.1-201ENST00000559747 1447 ntBASIC3.61□□□□□ -1.83
VBP1P61758 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.61□□□□□ -1.83
VBP1P61758 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
VBP1P61758 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
VBP1P61758 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
VBP1P61758 FIG4-202ENST00000368941 791 ntTSL 3 BASIC3.61□□□□□ -1.83
VBP1P61758 AP000567.1-201ENST00000406413 156 ntBASIC3.61□□□□□ -1.83
VBP1P61758 AC127526.1-201ENST00000417526 366 ntBASIC3.61□□□□□ -1.83
VBP1P61758 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.61□□□□□ -1.83
VBP1P61758 RPL21P109-201ENST00000422213 475 ntBASIC3.61□□□□□ -1.83
VBP1P61758 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.61□□□□□ -1.83
VBP1P61758 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.61□□□□□ -1.83
VBP1P61758 SKP1P1-201ENST00000438081 489 ntBASIC3.61□□□□□ -1.83
VBP1P61758 MTCYBP21-201ENST00000443300 1113 ntBASIC3.61□□□□□ -1.83
VBP1P61758 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC3.61□□□□□ -1.83
VBP1P61758 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.61□□□□□ -1.83
VBP1P61758 AC239367.2-201ENST00000447309 705 ntBASIC3.61□□□□□ -1.83
VBP1P61758 COPS8P2-201ENST00000473228 627 ntBASIC3.61□□□□□ -1.83
VBP1P61758 RN7SL174P-201ENST00000475578 289 ntBASIC3.61□□□□□ -1.83
VBP1P61758 RN7SL30P-201ENST00000488416 306 ntBASIC3.61□□□□□ -1.83
VBP1P61758 RPS27AP16-201ENST00000492222 470 ntBASIC3.61□□□□□ -1.83
VBP1P61758 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC3.61□□□□□ -1.83
VBP1P61758 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
VBP1P61758 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.61□□□□□ -1.83
VBP1P61758 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC3.61□□□□□ -1.83
VBP1P61758 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
VBP1P61758 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC3.61□□□□□ -1.83
VBP1P61758 AL121576.1-201ENST00000556055 276 ntBASIC3.61□□□□□ -1.83
VBP1P61758 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC3.61□□□□□ -1.83
VBP1P61758 MIR3667-201ENST00000581025 74 ntBASIC3.61□□□□□ -1.83
VBP1P61758 MIR3614-201ENST00000581261 86 ntBASIC3.61□□□□□ -1.83
VBP1P61758 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC3.61□□□□□ -1.83
VBP1P61758 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.61□□□□□ -1.83
VBP1P61758 AL451044.1-201ENST00000604867 238 ntBASIC3.61□□□□□ -1.83
VBP1P61758 AC018754.1-201ENST00000607486 925 ntBASIC3.61□□□□□ -1.83
VBP1P61758 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.61□□□□□ -1.83
VBP1P61758 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
VBP1P61758 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC3.61□□□□□ -1.83
VBP1P61758 SNORA50A-202ENST00000629536 136 ntBASIC3.61□□□□□ -1.83
VBP1P61758 ZNF542P-204ENST00000482727 1305 ntBASIC3.61□□□□□ -1.83
VBP1P61758 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
VBP1P61758 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
VBP1P61758 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
VBP1P61758 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
VBP1P61758 INTS6P1-201ENST00000504674 2530 ntBASIC3.6□□□□□ -1.83
VBP1P61758 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
VBP1P61758 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
VBP1P61758 MIR331-201ENST00000362302 94 ntBASIC3.6□□□□□ -1.83
VBP1P61758 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC3.6□□□□□ -1.83
VBP1P61758 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
VBP1P61758 CCNB2P1-201ENST00000399411 1150 ntBASIC3.6□□□□□ -1.83
VBP1P61758 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
VBP1P61758 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.6□□□□□ -1.83
VBP1P61758 AC010740.1-201ENST00000417035 684 ntBASIC3.6□□□□□ -1.83
VBP1P61758 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC3.6□□□□□ -1.83
VBP1P61758 CHIAP3-201ENST00000423668 1133 ntBASIC3.6□□□□□ -1.83
VBP1P61758 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC3.6□□□□□ -1.83
VBP1P61758 NFYAP1-201ENST00000431953 972 ntBASIC3.6□□□□□ -1.83
VBP1P61758 RAB28P3-201ENST00000448325 597 ntBASIC3.6□□□□□ -1.83
VBP1P61758 DNAJC19P1-201ENST00000455312 319 ntBASIC3.6□□□□□ -1.83
VBP1P61758 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC3.6□□□□□ -1.83
VBP1P61758 RPL7P24-201ENST00000493052 752 ntBASIC3.6□□□□□ -1.83
VBP1P61758 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.6□□□□□ -1.83
VBP1P61758 AC093824.1-201ENST00000508796 343 ntBASIC3.6□□□□□ -1.83
VBP1P61758 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.6□□□□□ -1.83
VBP1P61758 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.6□□□□□ -1.83
VBP1P61758 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC3.6□□□□□ -1.83
VBP1P61758 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC3.6□□□□□ -1.83
VBP1P61758 OR7E10P-201ENST00000526420 991 ntBASIC3.6□□□□□ -1.83
VBP1P61758 AP000827.1-201ENST00000527814 258 ntBASIC3.6□□□□□ -1.83
VBP1P61758 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
VBP1P61758 AC022968.1-201ENST00000567372 442 ntBASIC3.6□□□□□ -1.83
VBP1P61758 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
VBP1P61758 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
VBP1P61758 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.6□□□□□ -1.83
VBP1P61758 AC006946.3-201ENST00000609791 756 ntBASIC3.6□□□□□ -1.83
VBP1P61758 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
VBP1P61758 AL445363.3-201ENST00000623080 671 ntBASIC3.6□□□□□ -1.83
VBP1P61758 AP003497.2-201ENST00000624220 967 ntBASIC3.6□□□□□ -1.83
VBP1P61758 CGA-206ENST00000630630 832 ntTSL 2 BASIC3.6□□□□□ -1.83
VBP1P61758 AC140479.6-201ENST00000633535 357 ntBASIC3.6□□□□□ -1.83
VBP1P61758 UOX-205ENST00000640983 544 ntTSL 4 BASIC3.6□□□□□ -1.83
VBP1P61758 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
VBP1P61758 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
VBP1P61758 RNF6P1-201ENST00000444889 1784 ntBASIC3.6□□□□□ -1.83
VBP1P61758 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
VBP1P61758 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
VBP1P61758 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.6□□□□□ -1.83
VBP1P61758 NMD3P1-201ENST00000439704 1488 ntBASIC3.6□□□□□ -1.83
VBP1P61758 FTO-203ENST00000460382 1517 ntTSL 5 BASIC3.6□□□□□ -1.83
VBP1P61758 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
VBP1P61758 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
VBP1P61758 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
VBP1P61758 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
VBP1P61758 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms