Protein–RNA interactions for Protein: P59025

RTP1, Receptor-transporting protein 1, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP1P59025 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC6.11□□□□□ -1.43
RTP1P59025 AC016717.3-201ENST00000624730 554 ntBASIC6.11□□□□□ -1.43
RTP1P59025 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
RTP1P59025 AC099654.14-201ENST00000638599 341 ntBASIC6.11□□□□□ -1.43
RTP1P59025 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC6.11□□□□□ -1.43
RTP1P59025 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC6.11□□□□□ -1.43
RTP1P59025 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RTP1P59025 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RTP1P59025 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC6.11□□□□□ -1.43
RTP1P59025 AC012078.1-201ENST00000405035 1646 ntBASIC6.1□□□□□ -1.43
RTP1P59025 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RTP1P59025 AP000473.2-201ENST00000602659 1537 ntBASIC6.1□□□□□ -1.43
RTP1P59025 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC6.1□□□□□ -1.43
RTP1P59025 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
RTP1P59025 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.1□□□□□ -1.43
RTP1P59025 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.1□□□□□ -1.43
RTP1P59025 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC6.1□□□□□ -1.43
RTP1P59025 DDX18P6-201ENST00000450119 1997 ntBASIC6.1□□□□□ -1.43
RTP1P59025 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RTP1P59025 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RTP1P59025 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
RTP1P59025 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
RTP1P59025 Y_RNA.554-201ENST00000384672 102 ntBASIC6.1□□□□□ -1.43
RTP1P59025 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
RTP1P59025 DNAJA1P4-201ENST00000406473 1166 ntBASIC6.1□□□□□ -1.43
RTP1P59025 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC6.1□□□□□ -1.43
RTP1P59025 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC6.1□□□□□ -1.43
RTP1P59025 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC6.1□□□□□ -1.43
RTP1P59025 MRPS36P1-201ENST00000421291 307 ntBASIC6.1□□□□□ -1.43
RTP1P59025 USP9YP18-201ENST00000425912 695 ntBASIC6.1□□□□□ -1.43
RTP1P59025 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC6.1□□□□□ -1.43
RTP1P59025 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RTP1P59025 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC6.1□□□□□ -1.43
RTP1P59025 COX6CP12-201ENST00000446748 202 ntBASIC6.1□□□□□ -1.43
RTP1P59025 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC6.1□□□□□ -1.43
RTP1P59025 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RTP1P59025 RFC5P1-201ENST00000454419 874 ntBASIC6.1□□□□□ -1.43
RTP1P59025 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC6.1□□□□□ -1.43
RTP1P59025 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC6.1□□□□□ -1.43
RTP1P59025 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC6.1□□□□□ -1.43
RTP1P59025 ATP1B1P1-201ENST00000509767 915 ntBASIC6.1□□□□□ -1.43
RTP1P59025 BTG4P1-201ENST00000510421 183 ntBASIC6.1□□□□□ -1.43
RTP1P59025 AC097486.1-201ENST00000515331 210 ntBASIC6.1□□□□□ -1.43
RTP1P59025 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC6.1□□□□□ -1.43
RTP1P59025 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC6.1□□□□□ -1.43
RTP1P59025 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC6.1□□□□□ -1.43
RTP1P59025 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC6.1□□□□□ -1.43
RTP1P59025 BNIP3P1-201ENST00000547295 580 ntBASIC6.1□□□□□ -1.43
RTP1P59025 NTS-203ENST00000551529 801 ntTSL 3 BASIC6.1□□□□□ -1.43
RTP1P59025 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC6.1□□□□□ -1.43
RTP1P59025 RN7SL52P-201ENST00000584271 284 ntBASIC6.1□□□□□ -1.43
RTP1P59025 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC6.1□□□□□ -1.43
RTP1P59025 AC005084.1-201ENST00000605160 304 ntBASIC6.1□□□□□ -1.43
RTP1P59025 AP003117.2-201ENST00000606010 545 ntBASIC6.1□□□□□ -1.43
RTP1P59025 AC007014.2-201ENST00000615581 479 ntBASIC6.1□□□□□ -1.43
RTP1P59025 RN7SL722P-201ENST00000617780 284 ntBASIC6.1□□□□□ -1.43
RTP1P59025 RN7SL565P-201ENST00000618246 284 ntBASIC6.1□□□□□ -1.43
RTP1P59025 AC090527.3-201ENST00000619041 548 ntBASIC6.1□□□□□ -1.43
RTP1P59025 AC069209.1-201ENST00000619282 651 ntBASIC6.1□□□□□ -1.43
RTP1P59025 AC005618.4-201ENST00000625053 554 ntBASIC6.1□□□□□ -1.43
RTP1P59025 TEX41-256ENST00000626411 368 ntTSL 5 BASIC6.1□□□□□ -1.43
RTP1P59025 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC6.1□□□□□ -1.43
RTP1P59025 NEK3-211ENST00000629912 141 ntTSL 5 BASIC6.1□□□□□ -1.43
RTP1P59025 OR5H6-203ENST00000642105 978 ntBASIC6.1□□□□□ -1.43
RTP1P59025 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RTP1P59025 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RTP1P59025 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
RTP1P59025 CA1-225ENST00000626824 2405 ntTSL 5 BASIC6.1□□□□□ -1.43
RTP1P59025 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
RTP1P59025 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RTP1P59025 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC6.1□□□□□ -1.43
RTP1P59025 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC6.1□□□□□ -1.43
RTP1P59025 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
RTP1P59025 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC6.1□□□□□ -1.43
RTP1P59025 AP005435.3-201ENST00000531260 3198 ntBASIC6.1□□□□□ -1.43
RTP1P59025 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RTP1P59025 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC6.09□□□□□ -1.43
RTP1P59025 CASC19-221ENST00000641309 1382 ntBASIC6.09□□□□□ -1.43
RTP1P59025 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RTP1P59025 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
RTP1P59025 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RTP1P59025 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
RTP1P59025 FGF7P2-201ENST00000332473 296 ntBASIC6.09□□□□□ -1.43
RTP1P59025 MIR133A2-201ENST00000347538 102 ntBASIC6.09□□□□□ -1.43
RTP1P59025 Y_RNA.70-201ENST00000362886 110 ntBASIC6.09□□□□□ -1.43
RTP1P59025 SNORA17.1-201ENST00000362945 126 ntBASIC6.09□□□□□ -1.43
RTP1P59025 RNA5SP123-201ENST00000363244 119 ntBASIC6.09□□□□□ -1.43
RTP1P59025 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
RTP1P59025 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
RTP1P59025 Y_RNA.408-201ENST00000383987 102 ntBASIC6.09□□□□□ -1.43
RTP1P59025 OR6C69P-201ENST00000394268 893 ntBASIC6.09□□□□□ -1.43
RTP1P59025 NACAP7-201ENST00000407371 609 ntBASIC6.09□□□□□ -1.43
RTP1P59025 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC6.09□□□□□ -1.43
RTP1P59025 AC211486.3-201ENST00000412694 621 ntBASIC6.09□□□□□ -1.43
RTP1P59025 SLC44A3-AS1-205ENST00000424505 612 ntBASIC6.09□□□□□ -1.43
RTP1P59025 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.09□□□□□ -1.43
RTP1P59025 TMX2P1-201ENST00000436507 708 ntBASIC6.09□□□□□ -1.43
RTP1P59025 DNAJC19P4-201ENST00000440115 345 ntBASIC6.09□□□□□ -1.43
RTP1P59025 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC6.09□□□□□ -1.43
RTP1P59025 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 213 ms