Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CDH6P55285 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
CDH6P55285 MIR141-201ENST00000384975 95 ntBASIC4.24□□□□□ -1.73
CDH6P55285 RNU6-564P-201ENST00000410983 104 ntBASIC4.24□□□□□ -1.73
CDH6P55285 RNA5SP306-201ENST00000411087 107 ntBASIC4.24□□□□□ -1.73
CDH6P55285 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC4.24□□□□□ -1.73
CDH6P55285 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CDH6P55285 MTCO1P54-201ENST00000430139 712 ntBASIC4.24□□□□□ -1.73
CDH6P55285 AC007563.3-201ENST00000433233 371 ntBASIC4.24□□□□□ -1.73
CDH6P55285 AC009220.1-201ENST00000451614 275 ntBASIC4.24□□□□□ -1.73
CDH6P55285 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.24□□□□□ -1.73
CDH6P55285 AC010469.1-201ENST00000463864 576 ntBASIC4.24□□□□□ -1.73
CDH6P55285 NDUFA5P9-201ENST00000472609 340 ntBASIC4.24□□□□□ -1.73
CDH6P55285 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.24□□□□□ -1.73
CDH6P55285 RN7SL604P-201ENST00000492589 296 ntBASIC4.24□□□□□ -1.73
CDH6P55285 CEACAMP10-202ENST00000495431 496 ntBASIC4.24□□□□□ -1.73
CDH6P55285 RPS27AP13-201ENST00000498403 237 ntBASIC4.24□□□□□ -1.73
CDH6P55285 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.24□□□□□ -1.73
CDH6P55285 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.24□□□□□ -1.73
CDH6P55285 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.24□□□□□ -1.73
CDH6P55285 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.24□□□□□ -1.73
CDH6P55285 OR4V1P-201ENST00000525394 1140 ntBASIC4.24□□□□□ -1.73
CDH6P55285 AC135001.1-201ENST00000544546 283 ntBASIC4.24□□□□□ -1.73
CDH6P55285 AC092868.3-201ENST00000560515 784 ntBASIC4.24□□□□□ -1.73
CDH6P55285 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.24□□□□□ -1.73
CDH6P55285 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.24□□□□□ -1.73
CDH6P55285 AC023575.1-201ENST00000580510 358 ntBASIC4.24□□□□□ -1.73
CDH6P55285 KPNA2P3-201ENST00000584190 848 ntBASIC4.24□□□□□ -1.73
CDH6P55285 MIR5684-201ENST00000585074 65 ntBASIC4.24□□□□□ -1.73
CDH6P55285 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.24□□□□□ -1.73
CDH6P55285 AC006116.5-201ENST00000591936 559 ntBASIC4.24□□□□□ -1.73
CDH6P55285 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.24□□□□□ -1.73
CDH6P55285 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC4.24□□□□□ -1.73
CDH6P55285 AC005962.2-201ENST00000611427 652 ntBASIC4.24□□□□□ -1.73
CDH6P55285 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.24□□□□□ -1.73
CDH6P55285 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.24□□□□□ -1.73
CDH6P55285 MIR7151-201ENST00000617477 60 ntBASIC4.24□□□□□ -1.73
CDH6P55285 AL391597.1-201ENST00000618707 694 ntBASIC4.24□□□□□ -1.73
CDH6P55285 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.24□□□□□ -1.73
CDH6P55285 AL773545.4-201ENST00000637262 310 ntBASIC4.24□□□□□ -1.73
CDH6P55285 AL513478.4-201ENST00000641636 310 ntBASIC4.24□□□□□ -1.73
CDH6P55285 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
CDH6P55285 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
CDH6P55285 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.24□□□□□ -1.73
CDH6P55285 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.23□□□□□ -1.73
CDH6P55285 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.23□□□□□ -1.73
CDH6P55285 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CDH6P55285 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.23□□□□□ -1.73
CDH6P55285 RNU6-666P-201ENST00000363499 107 ntBASIC4.23□□□□□ -1.73
CDH6P55285 RNU6-819P-201ENST00000364116 107 ntBASIC4.23□□□□□ -1.73
CDH6P55285 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
CDH6P55285 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC4.23□□□□□ -1.73
CDH6P55285 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.23□□□□□ -1.73
CDH6P55285 SNORA3C-201ENST00000408792 125 ntBASIC4.23□□□□□ -1.73
CDH6P55285 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.23□□□□□ -1.73
CDH6P55285 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CDH6P55285 COX6CP15-201ENST00000426313 211 ntBASIC4.23□□□□□ -1.73
CDH6P55285 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.23□□□□□ -1.73
CDH6P55285 AL353748.1-201ENST00000440753 474 ntBASIC4.23□□□□□ -1.73
CDH6P55285 RPS4XP4-201ENST00000443195 763 ntBASIC4.23□□□□□ -1.73
CDH6P55285 NUTF2P3-201ENST00000448540 384 ntBASIC4.23□□□□□ -1.73
CDH6P55285 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC4.23□□□□□ -1.73
CDH6P55285 AC005229.2-201ENST00000456995 399 ntBASIC4.23□□□□□ -1.73
CDH6P55285 RPS23P7-201ENST00000466210 444 ntBASIC4.23□□□□□ -1.73
CDH6P55285 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.23□□□□□ -1.73
CDH6P55285 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.23□□□□□ -1.73
CDH6P55285 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.23□□□□□ -1.73
CDH6P55285 CDH12P2-201ENST00000504393 298 ntBASIC4.23□□□□□ -1.73
CDH6P55285 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.23□□□□□ -1.73
CDH6P55285 HPRT1P2-201ENST00000505250 544 ntBASIC4.23□□□□□ -1.73
CDH6P55285 HPRT1P1-201ENST00000509498 657 ntBASIC4.23□□□□□ -1.73
CDH6P55285 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.23□□□□□ -1.73
CDH6P55285 MTND1P6-201ENST00000523621 946 ntBASIC4.23□□□□□ -1.73
CDH6P55285 AC138701.1-201ENST00000524329 714 ntBASIC4.23□□□□□ -1.73
CDH6P55285 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.23□□□□□ -1.73
CDH6P55285 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.23□□□□□ -1.73
CDH6P55285 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.23□□□□□ -1.73
CDH6P55285 AC025627.2-201ENST00000576220 160 ntBASIC4.23□□□□□ -1.73
CDH6P55285 MIR3939-201ENST00000582614 106 ntBASIC4.23□□□□□ -1.73
CDH6P55285 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.23□□□□□ -1.73
CDH6P55285 AP004372.1-201ENST00000604842 844 ntBASIC4.23□□□□□ -1.73
CDH6P55285 MIR6716-201ENST00000613413 80 ntBASIC4.23□□□□□ -1.73
CDH6P55285 AC004825.2-201ENST00000616634 455 ntBASIC4.23□□□□□ -1.73
CDH6P55285 uc_338.9-201ENST00000617424 182 ntBASIC4.23□□□□□ -1.73
CDH6P55285 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.23□□□□□ -1.73
CDH6P55285 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC4.23□□□□□ -1.73
CDH6P55285 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.23□□□□□ -1.73
CDH6P55285 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC4.23□□□□□ -1.73
CDH6P55285 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC4.23□□□□□ -1.73
CDH6P55285 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CDH6P55285 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.23□□□□□ -1.73
CDH6P55285 AL592437.2-201ENST00000421655 2434 ntBASIC4.23□□□□□ -1.73
CDH6P55285 AC009951.1-201ENST00000623674 2614 ntBASIC4.23□□□□□ -1.73
CDH6P55285 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.23□□□□□ -1.73
CDH6P55285 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
CDH6P55285 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
CDH6P55285 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CDH6P55285 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.22□□□□□ -1.73
CDH6P55285 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
CDH6P55285 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms