Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
NUP98P52948 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
NUP98P52948 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
NUP98P52948 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
NUP98P52948 RNU4-35P-201ENST00000362588 141 ntBASIC4.62□□□□□ -1.67
NUP98P52948 MIR491-201ENST00000384877 84 ntBASIC4.62□□□□□ -1.67
NUP98P52948 OR52Y1P-201ENST00000452418 828 ntBASIC4.62□□□□□ -1.67
NUP98P52948 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
NUP98P52948 OR7M1P-201ENST00000608946 533 ntBASIC4.62□□□□□ -1.67
NUP98P52948 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
NUP98P52948 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
NUP98P52948 AC011266.1-201ENST00000624119 3569 ntBASIC4.62□□□□□ -1.67
NUP98P52948 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.62□□□□□ -1.67
NUP98P52948 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
NUP98P52948 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
NUP98P52948 AC073346.2-201ENST00000624724 2058 ntBASIC4.62□□□□□ -1.67
NUP98P52948 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
NUP98P52948 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
NUP98P52948 RN7SKP97-201ENST00000410966 333 ntBASIC4.62□□□□□ -1.67
NUP98P52948 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.62□□□□□ -1.67
NUP98P52948 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.62□□□□□ -1.67
NUP98P52948 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.62□□□□□ -1.67
NUP98P52948 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC4.62□□□□□ -1.67
NUP98P52948 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
NUP98P52948 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.62□□□□□ -1.67
NUP98P52948 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4.62□□□□□ -1.67
NUP98P52948 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.62□□□□□ -1.67
NUP98P52948 AC037471.2-201ENST00000564941 598 ntBASIC4.62□□□□□ -1.67
NUP98P52948 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.62□□□□□ -1.67
NUP98P52948 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
NUP98P52948 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.62□□□□□ -1.67
NUP98P52948 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.62□□□□□ -1.67
NUP98P52948 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
NUP98P52948 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
NUP98P52948 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
NUP98P52948 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
NUP98P52948 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.61□□□□□ -1.67
NUP98P52948 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
NUP98P52948 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NUP98P52948 RNU1-33P-201ENST00000364249 162 ntBASIC4.61□□□□□ -1.67
NUP98P52948 HMGB3P20-201ENST00000417997 600 ntBASIC4.61□□□□□ -1.67
NUP98P52948 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.61□□□□□ -1.67
NUP98P52948 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
NUP98P52948 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC4.61□□□□□ -1.67
NUP98P52948 SETP6-201ENST00000479329 568 ntBASIC4.61□□□□□ -1.67
NUP98P52948 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.61□□□□□ -1.67
NUP98P52948 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC4.61□□□□□ -1.67
NUP98P52948 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC4.61□□□□□ -1.67
NUP98P52948 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NUP98P52948 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NUP98P52948 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NUP98P52948 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NUP98P52948 AC120036.2-201ENST00000509729 1474 ntBASIC4.61□□□□□ -1.67
NUP98P52948 YES1-203ENST00000577961 4554 ntTSL 5 BASIC4.61□□□□□ -1.67
NUP98P52948 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
NUP98P52948 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.61□□□□□ -1.67
NUP98P52948 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
NUP98P52948 MIR218-2-201ENST00000385006 110 ntBASIC4.6□□□□□ -1.67
NUP98P52948 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.6□□□□□ -1.67
NUP98P52948 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.6□□□□□ -1.67
NUP98P52948 AL035458.1-201ENST00000433096 585 ntBASIC4.6□□□□□ -1.67
NUP98P52948 TPTE2P3-201ENST00000441562 1189 ntBASIC4.6□□□□□ -1.67
NUP98P52948 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.6□□□□□ -1.67
NUP98P52948 AC073387.1-201ENST00000453261 709 ntBASIC4.6□□□□□ -1.67
NUP98P52948 SUMO2P20-201ENST00000520803 283 ntBASIC4.6□□□□□ -1.67
NUP98P52948 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC4.6□□□□□ -1.67
NUP98P52948 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.6□□□□□ -1.67
NUP98P52948 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.6□□□□□ -1.67
NUP98P52948 AC090877.1-201ENST00000561418 344 ntBASIC4.6□□□□□ -1.67
NUP98P52948 AC011471.1-201ENST00000585766 187 ntBASIC4.6□□□□□ -1.67
NUP98P52948 AC092354.2-201ENST00000607786 514 ntBASIC4.6□□□□□ -1.67
NUP98P52948 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC4.6□□□□□ -1.67
NUP98P52948 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
NUP98P52948 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.6□□□□□ -1.67
NUP98P52948 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
NUP98P52948 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
NUP98P52948 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
NUP98P52948 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
NUP98P52948 AC097504.1-201ENST00000515103 2415 ntBASIC4.6□□□□□ -1.67
NUP98P52948 AC092435.4-201ENST00000623012 4159 ntBASIC4.6□□□□□ -1.67
NUP98P52948 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.6□□□□□ -1.67
NUP98P52948 AL442128.2-201ENST00000620246 1824 ntBASIC4.6□□□□□ -1.67
NUP98P52948 MAPK10-320ENST00000641462 6696 ntBASIC4.6□□□□□ -1.67
NUP98P52948 RNU6-525P-201ENST00000363685 104 ntBASIC4.6□□□□□ -1.67
NUP98P52948 OR52E6-202ENST00000379946 954 ntBASIC4.6□□□□□ -1.67
NUP98P52948 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
NUP98P52948 RNA5SP424-201ENST00000390988 115 ntBASIC4.6□□□□□ -1.67
NUP98P52948 AC096664.2-201ENST00000411843 406 ntBASIC4.6□□□□□ -1.67
NUP98P52948 RPS29P4-201ENST00000414733 161 ntBASIC4.6□□□□□ -1.67
NUP98P52948 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
NUP98P52948 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.6□□□□□ -1.67
NUP98P52948 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
NUP98P52948 BX510359.1-201ENST00000456973 237 ntBASIC4.6□□□□□ -1.67
NUP98P52948 CAB39P1-201ENST00000502277 460 ntBASIC4.6□□□□□ -1.67
NUP98P52948 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.6□□□□□ -1.67
NUP98P52948 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC4.6□□□□□ -1.67
NUP98P52948 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.6□□□□□ -1.67
NUP98P52948 AL442067.2-201ENST00000614033 363 ntBASIC4.6□□□□□ -1.67
NUP98P52948 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC4.6□□□□□ -1.67
NUP98P52948 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms