Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC3.84□□□□□ -1.79
HCFC1P51610 AC027228.2-201ENST00000567141 2154 ntBASIC3.84□□□□□ -1.79
HCFC1P51610 CASC19-204ENST00000641001 2055 ntBASIC3.84□□□□□ -1.79
HCFC1P51610 AL592182.3-201ENST00000642132 3304 ntBASIC3.84□□□□□ -1.79
HCFC1P51610 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
HCFC1P51610 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
HCFC1P51610 RNU6-1263P-201ENST00000384601 106 ntBASIC3.84□□□□□ -1.79
HCFC1P51610 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.79
HCFC1P51610 AC241520.1-201ENST00000422654 1099 ntBASIC3.84□□□□□ -1.79
HCFC1P51610 AC114495.1-201ENST00000441274 436 ntBASIC3.84□□□□□ -1.79
HCFC1P51610 VN1R34P-201ENST00000447387 883 ntBASIC3.84□□□□□ -1.79
HCFC1P51610 PTMAP3-201ENST00000447474 330 ntBASIC3.84□□□□□ -1.79
HCFC1P51610 AC239798.3-201ENST00000454459 408 ntBASIC3.84□□□□□ -1.79
HCFC1P51610 AL445433.1-201ENST00000457507 257 ntBASIC3.84□□□□□ -1.79
HCFC1P51610 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.84□□□□□ -1.79
HCFC1P51610 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.84□□□□□ -1.79
HCFC1P51610 RN7SKP46-201ENST00000515942 234 ntBASIC3.84□□□□□ -1.79
HCFC1P51610 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC3.84□□□□□ -1.79
HCFC1P51610 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC3.84□□□□□ -1.79
HCFC1P51610 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3.84□□□□□ -1.79
HCFC1P51610 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC3.84□□□□□ -1.79
HCFC1P51610 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.84□□□□□ -1.79
HCFC1P51610 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC3.84□□□□□ -1.79
HCFC1P51610 AC011374.2-201ENST00000607135 526 ntBASIC3.84□□□□□ -1.79
HCFC1P51610 AC084824.4-201ENST00000620106 731 ntBASIC3.84□□□□□ -1.79
HCFC1P51610 AC112200.1-201ENST00000625015 234 ntBASIC3.84□□□□□ -1.79
HCFC1P51610 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC3.84□□□□□ -1.79
HCFC1P51610 TEX41-256ENST00000626411 368 ntTSL 5 BASIC3.84□□□□□ -1.79
HCFC1P51610 Z95327.2-201ENST00000414579 1873 ntBASIC3.84□□□□□ -1.79
HCFC1P51610 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.8
HCFC1P51610 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
HCFC1P51610 AL133268.1-201ENST00000405676 1401 ntBASIC3.84□□□□□ -1.8
HCFC1P51610 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.8
HCFC1P51610 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC3.84□□□□□ -1.8
HCFC1P51610 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC3.84□□□□□ -1.8
HCFC1P51610 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
HCFC1P51610 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HCFC1P51610 RNU5E-10P-201ENST00000363506 118 ntBASIC3.83□□□□□ -1.8
HCFC1P51610 SNORD46.1-201ENST00000364139 104 ntBASIC3.83□□□□□ -1.8
HCFC1P51610 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.83□□□□□ -1.8
HCFC1P51610 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
HCFC1P51610 MIR122-201ENST00000385044 85 ntBASIC3.83□□□□□ -1.8
HCFC1P51610 AL034403.1-201ENST00000399414 885 ntBASIC3.83□□□□□ -1.8
HCFC1P51610 AL592291.1-201ENST00000403830 352 ntBASIC3.83□□□□□ -1.8
HCFC1P51610 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC3.83□□□□□ -1.8
HCFC1P51610 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.83□□□□□ -1.8
HCFC1P51610 AC006946.1-201ENST00000429106 328 ntBASIC3.83□□□□□ -1.8
HCFC1P51610 AL645931.1-201ENST00000439737 410 ntBASIC3.83□□□□□ -1.8
HCFC1P51610 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.83□□□□□ -1.8
HCFC1P51610 RPS7P7-201ENST00000463499 571 ntBASIC3.83□□□□□ -1.8
HCFC1P51610 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC3.83□□□□□ -1.8
HCFC1P51610 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC3.83□□□□□ -1.8
HCFC1P51610 GTF2IP9-201ENST00000502460 301 ntBASIC3.83□□□□□ -1.8
HCFC1P51610 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HCFC1P51610 ARL4AP1-201ENST00000503220 705 ntBASIC3.83□□□□□ -1.8
HCFC1P51610 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC3.83□□□□□ -1.8
HCFC1P51610 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC3.83□□□□□ -1.8
HCFC1P51610 RN7SKP141-201ENST00000516167 338 ntBASIC3.83□□□□□ -1.8
HCFC1P51610 RNA5SP49-201ENST00000516450 115 ntBASIC3.83□□□□□ -1.8
HCFC1P51610 AP001207.2-201ENST00000519490 539 ntBASIC3.83□□□□□ -1.8
HCFC1P51610 AP003066.2-201ENST00000529375 555 ntBASIC3.83□□□□□ -1.8
HCFC1P51610 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC3.83□□□□□ -1.8
HCFC1P51610 ZKSCAN7P1-201ENST00000543668 673 ntBASIC3.83□□□□□ -1.8
HCFC1P51610 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.83□□□□□ -1.8
HCFC1P51610 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC3.83□□□□□ -1.8
HCFC1P51610 MIR4509-3-201ENST00000578671 94 ntBASIC3.83□□□□□ -1.8
HCFC1P51610 RN7SL600P-201ENST00000581811 299 ntBASIC3.83□□□□□ -1.8
HCFC1P51610 MIR4509-2-201ENST00000583920 94 ntBASIC3.83□□□□□ -1.8
HCFC1P51610 RN7SL435P-201ENST00000584418 282 ntBASIC3.83□□□□□ -1.8
HCFC1P51610 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC3.83□□□□□ -1.8
HCFC1P51610 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC3.83□□□□□ -1.8
HCFC1P51610 AL365400.2-201ENST00000605604 902 ntBASIC3.83□□□□□ -1.8
HCFC1P51610 AC234782.5-201ENST00000617723 324 ntBASIC3.83□□□□□ -1.8
HCFC1P51610 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.83□□□□□ -1.8
HCFC1P51610 MIR4509-1-201ENST00000618224 94 ntBASIC3.83□□□□□ -1.8
HCFC1P51610 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC3.83□□□□□ -1.8
HCFC1P51610 AC012442.3-202ENST00000636742 206 ntBASIC3.83□□□□□ -1.8
HCFC1P51610 AL590396.4-201ENST00000636779 956 ntBASIC3.83□□□□□ -1.8
HCFC1P51610 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HCFC1P51610 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
HCFC1P51610 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.83□□□□□ -1.8
HCFC1P51610 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC3.83□□□□□ -1.8
HCFC1P51610 NOL8P1-201ENST00000508336 3529 ntBASIC3.83□□□□□ -1.8
HCFC1P51610 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
HCFC1P51610 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HCFC1P51610 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC3.83□□□□□ -1.8
HCFC1P51610 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HCFC1P51610 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HCFC1P51610 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
HCFC1P51610 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
HCFC1P51610 UBE2V1P11-201ENST00000411559 285 ntBASIC3.83□□□□□ -1.8
HCFC1P51610 RPS20P14-201ENST00000412545 360 ntBASIC3.83□□□□□ -1.8
HCFC1P51610 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC3.83□□□□□ -1.8
HCFC1P51610 AL158050.1-201ENST00000416077 457 ntBASIC3.83□□□□□ -1.8
HCFC1P51610 HMGB3P10-201ENST00000434734 572 ntBASIC3.83□□□□□ -1.8
HCFC1P51610 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.83□□□□□ -1.8
HCFC1P51610 TMX2P1-201ENST00000436507 708 ntBASIC3.83□□□□□ -1.8
HCFC1P51610 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HCFC1P51610 AL031313.1-201ENST00000448435 256 ntBASIC3.83□□□□□ -1.8
HCFC1P51610 AC091959.2-201ENST00000477363 321 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms