Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 RNA5SP183-201ENST00000362452 119 ntBASIC5.95□□□□□ -1.46
MRE11P49959 SNORA70.2-201ENST00000364506 135 ntBASIC5.95□□□□□ -1.46
MRE11P49959 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC5.95□□□□□ -1.46
MRE11P49959 RNU1-106P-201ENST00000384382 164 ntBASIC5.95□□□□□ -1.46
MRE11P49959 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
MRE11P49959 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
MRE11P49959 SNORD65C-201ENST00000390962 71 ntBASIC5.95□□□□□ -1.46
MRE11P49959 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
MRE11P49959 AP000580.1-201ENST00000404439 358 ntBASIC5.95□□□□□ -1.46
MRE11P49959 AL035079.1-201ENST00000405210 287 ntBASIC5.95□□□□□ -1.46
MRE11P49959 RNU6ATAC34P-201ENST00000408879 121 ntBASIC5.95□□□□□ -1.46
MRE11P49959 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.95□□□□□ -1.46
MRE11P49959 ZNF736P2Y-201ENST00000416040 1279 ntBASIC5.95□□□□□ -1.46
MRE11P49959 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC5.95□□□□□ -1.46
MRE11P49959 AC019178.2-201ENST00000423595 505 ntBASIC5.95□□□□□ -1.46
MRE11P49959 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.95□□□□□ -1.46
MRE11P49959 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.95□□□□□ -1.46
MRE11P49959 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
MRE11P49959 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.95□□□□□ -1.46
MRE11P49959 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC5.95□□□□□ -1.46
MRE11P49959 VN1R32P-201ENST00000452234 905 ntBASIC5.95□□□□□ -1.46
MRE11P49959 RPL12P26-201ENST00000452430 487 ntBASIC5.95□□□□□ -1.46
MRE11P49959 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC5.95□□□□□ -1.46
MRE11P49959 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
MRE11P49959 SYPL1P1-201ENST00000473622 768 ntBASIC5.95□□□□□ -1.46
MRE11P49959 NAA50-206ENST00000493454 964 ntTSL 2 BASIC5.95□□□□□ -1.46
MRE11P49959 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
MRE11P49959 OR5H4P-201ENST00000510851 923 ntBASIC5.95□□□□□ -1.46
MRE11P49959 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC5.95□□□□□ -1.46
MRE11P49959 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.95□□□□□ -1.46
MRE11P49959 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC5.95□□□□□ -1.46
MRE11P49959 C1GALT1P3-201ENST00000522049 819 ntBASIC5.95□□□□□ -1.46
MRE11P49959 AC013701.1-201ENST00000522657 465 ntBASIC5.95□□□□□ -1.46
MRE11P49959 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
MRE11P49959 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.95□□□□□ -1.46
MRE11P49959 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC5.95□□□□□ -1.46
MRE11P49959 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC5.95□□□□□ -1.46
MRE11P49959 AC090616.2-202ENST00000584248 222 ntBASIC5.95□□□□□ -1.46
MRE11P49959 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.95□□□□□ -1.46
MRE11P49959 AC234771.5-201ENST00000600161 514 ntBASIC5.95□□□□□ -1.46
MRE11P49959 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
MRE11P49959 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC5.95□□□□□ -1.46
MRE11P49959 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.95□□□□□ -1.46
MRE11P49959 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.95□□□□□ -1.46
MRE11P49959 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
MRE11P49959 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
MRE11P49959 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.95□□□□□ -1.46
MRE11P49959 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
MRE11P49959 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
MRE11P49959 Z95327.2-201ENST00000414579 1873 ntBASIC5.94□□□□□ -1.46
MRE11P49959 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
MRE11P49959 ZNF733P-202ENST00000444809 1573 ntBASIC5.94□□□□□ -1.46
MRE11P49959 ECM1P2-201ENST00000503354 1577 ntBASIC5.94□□□□□ -1.46
MRE11P49959 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.94□□□□□ -1.46
MRE11P49959 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.94□□□□□ -1.46
MRE11P49959 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
MRE11P49959 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
MRE11P49959 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
MRE11P49959 IL6STP1-201ENST00000346911 1020 ntBASIC5.94□□□□□ -1.46
MRE11P49959 RPL32P3-201ENST00000359025 275 ntBASIC5.94□□□□□ -1.46
MRE11P49959 RNA5SP319-201ENST00000362768 119 ntBASIC5.94□□□□□ -1.46
MRE11P49959 CGA-201ENST00000369582 729 ntTSL 5 BASIC5.94□□□□□ -1.46
MRE11P49959 RNU6-413P-201ENST00000384115 107 ntBASIC5.94□□□□□ -1.46
MRE11P49959 RNU6-1263P-201ENST00000384601 106 ntBASIC5.94□□□□□ -1.46
MRE11P49959 HMGB3P7-201ENST00000400214 611 ntBASIC5.94□□□□□ -1.46
MRE11P49959 AC022028.1-201ENST00000412054 408 ntBASIC5.94□□□□□ -1.46
MRE11P49959 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.94□□□□□ -1.46
MRE11P49959 CYCSP10-201ENST00000417973 294 ntBASIC5.94□□□□□ -1.46
MRE11P49959 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.94□□□□□ -1.46
MRE11P49959 OR5BE1P-201ENST00000425977 939 ntBASIC5.94□□□□□ -1.46
MRE11P49959 AC104837.2-201ENST00000427236 424 ntBASIC5.94□□□□□ -1.46
MRE11P49959 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.94□□□□□ -1.46
MRE11P49959 AC009238.2-201ENST00000431026 355 ntBASIC5.94□□□□□ -1.46
MRE11P49959 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC5.94□□□□□ -1.46
MRE11P49959 AC005297.1-201ENST00000444765 862 ntBASIC5.94□□□□□ -1.46
MRE11P49959 TAF9P1-201ENST00000445421 515 ntBASIC5.94□□□□□ -1.46
MRE11P49959 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC5.94□□□□□ -1.46
MRE11P49959 AL157827.1-201ENST00000447622 132 ntBASIC5.94□□□□□ -1.46
MRE11P49959 AL050341.1-201ENST00000447743 313 ntBASIC5.94□□□□□ -1.46
MRE11P49959 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.94□□□□□ -1.46
MRE11P49959 TAF9P2-201ENST00000454958 515 ntBASIC5.94□□□□□ -1.46
MRE11P49959 RPS3AP41-201ENST00000462701 778 ntBASIC5.94□□□□□ -1.46
MRE11P49959 AC109462.1-201ENST00000491087 368 ntBASIC5.94□□□□□ -1.46
MRE11P49959 AC025459.1-201ENST00000504072 156 ntBASIC5.94□□□□□ -1.46
MRE11P49959 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.94□□□□□ -1.46
MRE11P49959 AC021146.3-201ENST00000511911 260 ntBASIC5.94□□□□□ -1.46
MRE11P49959 AC110775.1-201ENST00000513721 462 ntBASIC5.94□□□□□ -1.46
MRE11P49959 HMGB1P23-201ENST00000518743 568 ntBASIC5.94□□□□□ -1.46
MRE11P49959 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC5.94□□□□□ -1.46
MRE11P49959 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
MRE11P49959 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
MRE11P49959 ELOCP32-201ENST00000548625 324 ntBASIC5.94□□□□□ -1.46
MRE11P49959 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC5.94□□□□□ -1.46
MRE11P49959 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.94□□□□□ -1.46
MRE11P49959 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.94□□□□□ -1.46
MRE11P49959 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC5.94□□□□□ -1.46
MRE11P49959 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC5.94□□□□□ -1.46
MRE11P49959 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC5.94□□□□□ -1.46
MRE11P49959 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC5.94□□□□□ -1.46
MRE11P49959 AL031985.2-201ENST00000600955 480 ntBASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms