Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC3.98□□□□□ -1.77
NKX2-1P43699 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC3.98□□□□□ -1.77
NKX2-1P43699 AC012075.1-201ENST00000436549 580 ntBASIC3.98□□□□□ -1.77
NKX2-1P43699 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC3.98□□□□□ -1.77
NKX2-1P43699 TDGF1P1-201ENST00000445734 527 ntBASIC3.98□□□□□ -1.77
NKX2-1P43699 EIF4A1P6-201ENST00000448133 1210 ntBASIC3.98□□□□□ -1.77
NKX2-1P43699 MTND1P31-201ENST00000449206 961 ntBASIC3.98□□□□□ -1.77
NKX2-1P43699 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC3.98□□□□□ -1.77
NKX2-1P43699 HMGN3P1-201ENST00000453847 193 ntBASIC3.98□□□□□ -1.77
NKX2-1P43699 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC3.98□□□□□ -1.77
NKX2-1P43699 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.98□□□□□ -1.77
NKX2-1P43699 APOA2-207ENST00000470459 416 ntTSL 5 BASIC3.98□□□□□ -1.77
NKX2-1P43699 AP000893.1-201ENST00000474462 794 ntBASIC3.98□□□□□ -1.77
NKX2-1P43699 RN7SL41P-201ENST00000476144 297 ntBASIC3.98□□□□□ -1.77
NKX2-1P43699 RN7SL717P-201ENST00000478343 297 ntBASIC3.98□□□□□ -1.77
NKX2-1P43699 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC3.98□□□□□ -1.77
NKX2-1P43699 AC010350.1-201ENST00000504908 231 ntBASIC3.98□□□□□ -1.77
NKX2-1P43699 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.98□□□□□ -1.77
NKX2-1P43699 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC3.98□□□□□ -1.77
NKX2-1P43699 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.98□□□□□ -1.77
NKX2-1P43699 RPL7L1P4-201ENST00000513004 707 ntBASIC3.98□□□□□ -1.77
NKX2-1P43699 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC3.98□□□□□ -1.77
NKX2-1P43699 RNA5SP135-201ENST00000517019 125 ntBASIC3.98□□□□□ -1.77
NKX2-1P43699 AF186190.1-201ENST00000517470 480 ntBASIC3.98□□□□□ -1.77
NKX2-1P43699 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC3.98□□□□□ -1.77
NKX2-1P43699 MRPS36P3-201ENST00000519284 130 ntBASIC3.98□□□□□ -1.77
NKX2-1P43699 NPM1P6-201ENST00000521088 871 ntBASIC3.98□□□□□ -1.77
NKX2-1P43699 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.98□□□□□ -1.77
NKX2-1P43699 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC3.98□□□□□ -1.77
NKX2-1P43699 DUXAP5-201ENST00000529668 529 ntBASIC3.98□□□□□ -1.77
NKX2-1P43699 AC023538.1-201ENST00000534576 736 ntBASIC3.98□□□□□ -1.77
NKX2-1P43699 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC3.98□□□□□ -1.77
NKX2-1P43699 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC3.98□□□□□ -1.77
NKX2-1P43699 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC3.98□□□□□ -1.77
NKX2-1P43699 AC044913.1-201ENST00000557200 430 ntBASIC3.98□□□□□ -1.77
NKX2-1P43699 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC3.98□□□□□ -1.77
NKX2-1P43699 AL020997.3-201ENST00000602843 359 ntBASIC3.98□□□□□ -1.77
NKX2-1P43699 AL589674.2-201ENST00000604304 337 ntBASIC3.98□□□□□ -1.77
NKX2-1P43699 AC009237.15-201ENST00000610252 501 ntBASIC3.98□□□□□ -1.77
NKX2-1P43699 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
NKX2-1P43699 AC079395.3-201ENST00000615161 484 ntBASIC3.98□□□□□ -1.77
NKX2-1P43699 AC026124.2-201ENST00000621847 656 ntBASIC3.98□□□□□ -1.77
NKX2-1P43699 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.98□□□□□ -1.77
NKX2-1P43699 AC019206.1-201ENST00000621938 425 ntBASIC3.98□□□□□ -1.77
NKX2-1P43699 AC124312.6-202ENST00000623624 418 ntBASIC3.98□□□□□ -1.77
NKX2-1P43699 UGP2-231ENST00000627474 264 ntTSL 5 BASIC3.98□□□□□ -1.77
NKX2-1P43699 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC3.98□□□□□ -1.77
NKX2-1P43699 METTL15-211ENST00000634762 718 ntTSL 5 BASIC3.98□□□□□ -1.77
NKX2-1P43699 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC3.98□□□□□ -1.77
NKX2-1P43699 MFSD8-245ENST00000641743 948 ntBASIC3.98□□□□□ -1.77
NKX2-1P43699 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
NKX2-1P43699 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
NKX2-1P43699 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC3.97□□□□□ -1.77
NKX2-1P43699 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.97□□□□□ -1.77
NKX2-1P43699 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
NKX2-1P43699 AC000367.1-201ENST00000452711 1766 ntBASIC3.97□□□□□ -1.77
NKX2-1P43699 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC3.97□□□□□ -1.77
NKX2-1P43699 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
NKX2-1P43699 AC120338.1-201ENST00000625074 1541 ntBASIC3.97□□□□□ -1.77
NKX2-1P43699 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
NKX2-1P43699 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC3.97□□□□□ -1.77
NKX2-1P43699 HMGB1P5-201ENST00000255320 642 ntBASIC3.97□□□□□ -1.77
NKX2-1P43699 SNORA67-201ENST00000384423 137 ntBASIC3.97□□□□□ -1.77
NKX2-1P43699 TAS2R15P-201ENST00000390674 928 ntBASIC3.97□□□□□ -1.77
NKX2-1P43699 RNU1-77P-201ENST00000390868 162 ntBASIC3.97□□□□□ -1.77
NKX2-1P43699 MTND4P13-201ENST00000402078 1023 ntBASIC3.97□□□□□ -1.77
NKX2-1P43699 HDGFP1-201ENST00000405943 252 ntBASIC3.97□□□□□ -1.77
NKX2-1P43699 AL080315.1-201ENST00000406055 466 ntBASIC3.97□□□□□ -1.77
NKX2-1P43699 RNU6ATAC18P-201ENST00000408413 101 ntBASIC3.97□□□□□ -1.77
NKX2-1P43699 RNA5SP146-201ENST00000410743 123 ntBASIC3.97□□□□□ -1.77
NKX2-1P43699 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC3.97□□□□□ -1.77
NKX2-1P43699 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC3.97□□□□□ -1.77
NKX2-1P43699 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.97□□□□□ -1.77
NKX2-1P43699 AC004448.2-201ENST00000422360 586 ntBASIC3.97□□□□□ -1.77
NKX2-1P43699 CETN4P-201ENST00000432407 469 ntBASIC3.97□□□□□ -1.77
NKX2-1P43699 NANOGP2-201ENST00000435391 727 ntBASIC3.97□□□□□ -1.77
NKX2-1P43699 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC3.97□□□□□ -1.77
NKX2-1P43699 AC105402.2-201ENST00000438503 358 ntBASIC3.97□□□□□ -1.77
NKX2-1P43699 MTCYBP31-201ENST00000438855 1122 ntBASIC3.97□□□□□ -1.77
NKX2-1P43699 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.97□□□□□ -1.77
NKX2-1P43699 RPL12P11-201ENST00000439970 501 ntBASIC3.97□□□□□ -1.77
NKX2-1P43699 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC3.97□□□□□ -1.77
NKX2-1P43699 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC3.97□□□□□ -1.77
NKX2-1P43699 AC073587.1-201ENST00000447093 876 ntBASIC3.97□□□□□ -1.77
NKX2-1P43699 RPL35AP19-201ENST00000469425 329 ntBASIC3.97□□□□□ -1.77
NKX2-1P43699 RN7SL817P-201ENST00000480777 288 ntBASIC3.97□□□□□ -1.77
NKX2-1P43699 AC011037.1-201ENST00000483964 558 ntBASIC3.97□□□□□ -1.77
NKX2-1P43699 RPL7P51-201ENST00000490532 749 ntBASIC3.97□□□□□ -1.77
NKX2-1P43699 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
NKX2-1P43699 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC3.97□□□□□ -1.77
NKX2-1P43699 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.97□□□□□ -1.77
NKX2-1P43699 STMN1P2-201ENST00000508435 439 ntBASIC3.97□□□□□ -1.77
NKX2-1P43699 PGBD4P4-201ENST00000509673 613 ntBASIC3.97□□□□□ -1.77
NKX2-1P43699 AC005351.1-201ENST00000511152 786 ntBASIC3.97□□□□□ -1.77
NKX2-1P43699 AC092593.2-201ENST00000513866 913 ntBASIC3.97□□□□□ -1.77
NKX2-1P43699 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.97□□□□□ -1.77
NKX2-1P43699 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC3.97□□□□□ -1.77
NKX2-1P43699 MTND2P38-201ENST00000522536 667 ntBASIC3.97□□□□□ -1.77
NKX2-1P43699 OR5M2P-201ENST00000529003 936 ntBASIC3.97□□□□□ -1.77
NKX2-1P43699 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms