Protein–RNA interactions for Protein: P41225

SOX3, Transcription factor SOX-3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3P41225 AP001324.1-201ENST00000428553 399 ntBASIC4.17□□□□□ -1.74
SOX3P41225 RPL21P91-201ENST00000429231 479 ntBASIC4.17□□□□□ -1.74
SOX3P41225 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.17□□□□□ -1.74
SOX3P41225 AL645638.1-201ENST00000440519 361 ntBASIC4.17□□□□□ -1.74
SOX3P41225 RPS27AP15-201ENST00000447672 466 ntBASIC4.17□□□□□ -1.74
SOX3P41225 Z95152.1-201ENST00000453556 656 ntBASIC4.17□□□□□ -1.74
SOX3P41225 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SOX3P41225 RPS6P2-201ENST00000454208 705 ntBASIC4.17□□□□□ -1.74
SOX3P41225 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.17□□□□□ -1.74
SOX3P41225 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.17□□□□□ -1.74
SOX3P41225 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.17□□□□□ -1.74
SOX3P41225 AC008427.1-201ENST00000503102 655 ntBASIC4.17□□□□□ -1.74
SOX3P41225 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.17□□□□□ -1.74
SOX3P41225 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.17□□□□□ -1.74
SOX3P41225 HPRT1P1-201ENST00000509498 657 ntBASIC4.17□□□□□ -1.74
SOX3P41225 IGLVIV-65-201ENST00000517313 360 ntBASIC4.17□□□□□ -1.74
SOX3P41225 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SOX3P41225 IGKV2D-10-201ENST00000520194 281 ntBASIC4.17□□□□□ -1.74
SOX3P41225 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.17□□□□□ -1.74
SOX3P41225 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.17□□□□□ -1.74
SOX3P41225 AC084759.1-201ENST00000561168 290 ntBASIC4.17□□□□□ -1.74
SOX3P41225 MIR4284-201ENST00000578924 81 ntBASIC4.17□□□□□ -1.74
SOX3P41225 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
SOX3P41225 AP000919.1-202ENST00000581139 1264 ntBASIC4.17□□□□□ -1.74
SOX3P41225 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.17□□□□□ -1.74
SOX3P41225 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC4.17□□□□□ -1.74
SOX3P41225 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.17□□□□□ -1.74
SOX3P41225 RN7SL622P-201ENST00000585292 275 ntBASIC4.17□□□□□ -1.74
SOX3P41225 AC096947.1-201ENST00000603233 470 ntBASIC4.17□□□□□ -1.74
SOX3P41225 FRG1HP-204ENST00000617940 757 ntBASIC4.17□□□□□ -1.74
SOX3P41225 OR4G3P-201ENST00000633500 913 ntBASIC4.17□□□□□ -1.74
SOX3P41225 AC099654.9-201ENST00000637055 678 ntBASIC4.17□□□□□ -1.74
SOX3P41225 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SOX3P41225 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
SOX3P41225 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SOX3P41225 AC025031.4-201ENST00000621248 3271 ntBASIC4.17□□□□□ -1.74
SOX3P41225 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.16□□□□□ -1.74
SOX3P41225 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SOX3P41225 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SOX3P41225 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.16□□□□□ -1.74
SOX3P41225 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SOX3P41225 AC126755.2-208ENST00000327792 462 ntBASIC4.16□□□□□ -1.74
SOX3P41225 AC138969.1-213ENST00000331436 462 ntBASIC4.16□□□□□ -1.74
SOX3P41225 RNA5SP27-201ENST00000363839 119 ntBASIC4.16□□□□□ -1.74
SOX3P41225 RNA5SP151-201ENST00000365632 117 ntBASIC4.16□□□□□ -1.74
SOX3P41225 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
SOX3P41225 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.16□□□□□ -1.74
SOX3P41225 GSTM3P2-201ENST00000412746 530 ntBASIC4.16□□□□□ -1.74
SOX3P41225 VTA1P1-201ENST00000414044 866 ntBASIC4.16□□□□□ -1.74
SOX3P41225 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC4.16□□□□□ -1.74
SOX3P41225 AL732292.1-201ENST00000426692 226 ntBASIC4.16□□□□□ -1.74
SOX3P41225 DYNLL1P7-201ENST00000429273 258 ntBASIC4.16□□□□□ -1.74
SOX3P41225 FTH1P16-201ENST00000435241 552 ntBASIC4.16□□□□□ -1.74
SOX3P41225 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.16□□□□□ -1.74
SOX3P41225 ARF4P4-201ENST00000439608 520 ntBASIC4.16□□□□□ -1.74
SOX3P41225 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.16□□□□□ -1.74
SOX3P41225 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.16□□□□□ -1.74
SOX3P41225 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SOX3P41225 GTF2IP12-201ENST00000456547 356 ntBASIC4.16□□□□□ -1.74
SOX3P41225 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC4.16□□□□□ -1.74
SOX3P41225 AC090013.1-201ENST00000485147 480 ntBASIC4.16□□□□□ -1.74
SOX3P41225 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC4.16□□□□□ -1.74
SOX3P41225 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.16□□□□□ -1.74
SOX3P41225 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.16□□□□□ -1.74
SOX3P41225 SUMO2P5-201ENST00000506790 245 ntBASIC4.16□□□□□ -1.74
SOX3P41225 AC008694.2-201ENST00000517591 306 ntBASIC4.16□□□□□ -1.74
SOX3P41225 AC090151.1-201ENST00000520784 730 ntBASIC4.16□□□□□ -1.74
SOX3P41225 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC4.16□□□□□ -1.74
SOX3P41225 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SOX3P41225 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC4.16□□□□□ -1.74
SOX3P41225 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.16□□□□□ -1.74
SOX3P41225 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SOX3P41225 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.16□□□□□ -1.74
SOX3P41225 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.16□□□□□ -1.74
SOX3P41225 AC022884.3-201ENST00000579571 248 ntBASIC4.16□□□□□ -1.74
SOX3P41225 AC091178.1-203ENST00000584586 279 ntBASIC4.16□□□□□ -1.74
SOX3P41225 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.16□□□□□ -1.74
SOX3P41225 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC4.16□□□□□ -1.74
SOX3P41225 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.16□□□□□ -1.74
SOX3P41225 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.16□□□□□ -1.74
SOX3P41225 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC4.16□□□□□ -1.74
SOX3P41225 AC091057.3-201ENST00000602684 733 ntBASIC4.16□□□□□ -1.74
SOX3P41225 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.16□□□□□ -1.74
SOX3P41225 AL356218.2-201ENST00000605264 187 ntBASIC4.16□□□□□ -1.74
SOX3P41225 AC090525.3-201ENST00000605601 189 ntBASIC4.16□□□□□ -1.74
SOX3P41225 AC008966.2-201ENST00000606157 453 ntBASIC4.16□□□□□ -1.74
SOX3P41225 AC020634.1-201ENST00000608701 549 ntBASIC4.16□□□□□ -1.74
SOX3P41225 AC090912.3-201ENST00000609775 533 ntBASIC4.16□□□□□ -1.74
SOX3P41225 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.16□□□□□ -1.74
SOX3P41225 AC009237.17-201ENST00000618111 748 ntBASIC4.16□□□□□ -1.74
SOX3P41225 AC073569.3-201ENST00000619055 682 ntBASIC4.16□□□□□ -1.74
SOX3P41225 AP001005.3-201ENST00000622049 129 ntBASIC4.16□□□□□ -1.74
SOX3P41225 AP003497.2-201ENST00000624220 967 ntBASIC4.16□□□□□ -1.74
SOX3P41225 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.16□□□□□ -1.74
SOX3P41225 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.16□□□□□ -1.74
SOX3P41225 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.16□□□□□ -1.74
SOX3P41225 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SOX3P41225 AL627171.1-201ENST00000618845 1308 ntBASIC4.16□□□□□ -1.74
SOX3P41225 MAPK10-286ENST00000641208 8747 ntBASIC4.16□□□□□ -1.74
SOX3P41225 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.15□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms