Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC6.38□□□□□ -1.39
NFKB1P19838 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.38□□□□□ -1.39
NFKB1P19838 PDCD5P1-201ENST00000543528 309 ntBASIC6.38□□□□□ -1.39
NFKB1P19838 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC6.38□□□□□ -1.39
NFKB1P19838 DUX4L52-201ENST00000549363 777 ntBASIC6.38□□□□□ -1.39
NFKB1P19838 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC6.38□□□□□ -1.39
NFKB1P19838 AC012368.3-201ENST00000604190 219 ntBASIC6.38□□□□□ -1.39
NFKB1P19838 NQO2-209ENST00000606474 470 ntTSL 3 BASIC6.38□□□□□ -1.39
NFKB1P19838 AC018690.1-201ENST00000608144 626 ntBASIC6.38□□□□□ -1.39
NFKB1P19838 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.38□□□□□ -1.39
NFKB1P19838 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC6.38□□□□□ -1.39
NFKB1P19838 7SK.10-201ENST00000621414 298 ntBASIC6.38□□□□□ -1.39
NFKB1P19838 MIR6823-201ENST00000622118 61 ntBASIC6.38□□□□□ -1.39
NFKB1P19838 AC145207.9-201ENST00000623802 325 ntBASIC6.38□□□□□ -1.39
NFKB1P19838 AC090617.10-201ENST00000624308 134 ntBASIC6.38□□□□□ -1.39
NFKB1P19838 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.38□□□□□ -1.39
NFKB1P19838 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.38□□□□□ -1.39
NFKB1P19838 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
NFKB1P19838 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
NFKB1P19838 SHQ1P1-201ENST00000437111 1544 ntBASIC6.38□□□□□ -1.39
NFKB1P19838 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
NFKB1P19838 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
NFKB1P19838 AC092692.1-201ENST00000623625 2595 ntBASIC6.38□□□□□ -1.39
NFKB1P19838 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.38□□□□□ -1.39
NFKB1P19838 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
NFKB1P19838 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.37□□□□□ -1.39
NFKB1P19838 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
NFKB1P19838 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
NFKB1P19838 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
NFKB1P19838 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.37□□□□□ -1.39
NFKB1P19838 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
NFKB1P19838 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.37□□□□□ -1.39
NFKB1P19838 CASC19-246ENST00000641625 1606 ntBASIC6.37□□□□□ -1.39
NFKB1P19838 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.37□□□□□ -1.39
NFKB1P19838 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.37□□□□□ -1.39
NFKB1P19838 AL592429.1-201ENST00000403909 1473 ntBASIC6.37□□□□□ -1.39
NFKB1P19838 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
NFKB1P19838 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
NFKB1P19838 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
NFKB1P19838 Y_RNA.46-201ENST00000362695 102 ntBASIC6.37□□□□□ -1.39
NFKB1P19838 Y_RNA.459-201ENST00000384251 102 ntBASIC6.37□□□□□ -1.39
NFKB1P19838 MIR551B-201ENST00000384984 96 ntBASIC6.37□□□□□ -1.39
NFKB1P19838 Y_RNA.579-201ENST00000390939 94 ntBASIC6.37□□□□□ -1.39
NFKB1P19838 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
NFKB1P19838 MRPL42P2-201ENST00000403169 426 ntBASIC6.37□□□□□ -1.39
NFKB1P19838 HMGB1P17-201ENST00000403495 628 ntBASIC6.37□□□□□ -1.39
NFKB1P19838 PRELID1P1-201ENST00000403549 660 ntBASIC6.37□□□□□ -1.39
NFKB1P19838 GAPDHP42-201ENST00000406848 981 ntBASIC6.37□□□□□ -1.39
NFKB1P19838 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC6.37□□□□□ -1.39
NFKB1P19838 RN7SKP222-201ENST00000410651 315 ntBASIC6.37□□□□□ -1.39
NFKB1P19838 RN7SKP121-201ENST00000410842 305 ntBASIC6.37□□□□□ -1.39
NFKB1P19838 RNU6-1148P-201ENST00000410992 104 ntBASIC6.37□□□□□ -1.39
NFKB1P19838 ALDH7A1P4-201ENST00000412255 178 ntBASIC6.37□□□□□ -1.39
NFKB1P19838 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC6.37□□□□□ -1.39
NFKB1P19838 AC009161.1-201ENST00000417306 376 ntBASIC6.37□□□□□ -1.39
NFKB1P19838 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC6.37□□□□□ -1.39
NFKB1P19838 OR1AA1P-201ENST00000419597 916 ntBASIC6.37□□□□□ -1.39
NFKB1P19838 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC6.37□□□□□ -1.39
NFKB1P19838 GTF2IP13-201ENST00000438487 386 ntBASIC6.37□□□□□ -1.39
NFKB1P19838 HIGD1AP16-201ENST00000450986 258 ntBASIC6.37□□□□□ -1.39
NFKB1P19838 AC239798.3-201ENST00000454459 408 ntBASIC6.37□□□□□ -1.39
NFKB1P19838 MRPS17P3-201ENST00000465453 385 ntBASIC6.37□□□□□ -1.39
NFKB1P19838 SNRPCP11-201ENST00000492453 205 ntBASIC6.37□□□□□ -1.39
NFKB1P19838 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC6.37□□□□□ -1.39
NFKB1P19838 AC093816.1-201ENST00000515076 913 ntBASIC6.37□□□□□ -1.39
NFKB1P19838 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
NFKB1P19838 RNU6-201P-201ENST00000517100 61 ntBASIC6.37□□□□□ -1.39
NFKB1P19838 IGHV7-34-1-201ENST00000519200 350 ntBASIC6.37□□□□□ -1.39
NFKB1P19838 BTF3P12-201ENST00000519620 469 ntBASIC6.37□□□□□ -1.39
NFKB1P19838 AC022616.6-201ENST00000520479 119 ntBASIC6.37□□□□□ -1.39
NFKB1P19838 CYCSP25-201ENST00000525280 316 ntBASIC6.37□□□□□ -1.39
NFKB1P19838 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC6.37□□□□□ -1.39
NFKB1P19838 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC6.37□□□□□ -1.39
NFKB1P19838 NELL2-211ENST00000548826 559 ntTSL 2 BASIC6.37□□□□□ -1.39
NFKB1P19838 AC090502.2-201ENST00000549267 280 ntBASIC6.37□□□□□ -1.39
NFKB1P19838 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC6.37□□□□□ -1.39
NFKB1P19838 SCOCP1-201ENST00000554676 349 ntBASIC6.37□□□□□ -1.39
NFKB1P19838 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC6.37□□□□□ -1.39
NFKB1P19838 MIR5186-201ENST00000577504 120 ntBASIC6.37□□□□□ -1.39
NFKB1P19838 AC006006.1-201ENST00000603082 144 ntBASIC6.37□□□□□ -1.39
NFKB1P19838 AC115621.1-201ENST00000604653 858 ntBASIC6.37□□□□□ -1.39
NFKB1P19838 AC124303.1-201ENST00000605703 360 ntBASIC6.37□□□□□ -1.39
NFKB1P19838 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC6.37□□□□□ -1.39
NFKB1P19838 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC6.37□□□□□ -1.39
NFKB1P19838 AC104237.2-201ENST00000612456 443 ntBASIC6.37□□□□□ -1.39
NFKB1P19838 AL132822.1-201ENST00000617063 513 ntBASIC6.37□□□□□ -1.39
NFKB1P19838 AL356274.1-201ENST00000617064 410 ntBASIC6.37□□□□□ -1.39
NFKB1P19838 AL122023.1-201ENST00000622847 530 ntBASIC6.37□□□□□ -1.39
NFKB1P19838 AC007792.1-201ENST00000623023 402 ntBASIC6.37□□□□□ -1.39
NFKB1P19838 AL078596.1-201ENST00000624856 447 ntBASIC6.37□□□□□ -1.39
NFKB1P19838 AC007603.3-201ENST00000636915 979 ntBASIC6.37□□□□□ -1.39
NFKB1P19838 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.37□□□□□ -1.39
NFKB1P19838 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
NFKB1P19838 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.37□□□□□ -1.39
NFKB1P19838 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.37□□□□□ -1.39
NFKB1P19838 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.37□□□□□ -1.39
NFKB1P19838 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
NFKB1P19838 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.36□□□□□ -1.39
NFKB1P19838 NUP58P1-201ENST00000502546 1738 ntBASIC6.36□□□□□ -1.39
NFKB1P19838 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms