Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 AC055764.2-201ENST00000610089 670 ntBASIC4.25□□□□□ -1.73
HLA-DOBP13765 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HLA-DOBP13765 MIR8069-1-201ENST00000616627 86 ntBASIC4.25□□□□□ -1.73
HLA-DOBP13765 MIR8069-2-201ENST00000621412 86 ntBASIC4.25□□□□□ -1.73
HLA-DOBP13765 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.25□□□□□ -1.73
HLA-DOBP13765 AC104260.2-201ENST00000623551 3497 ntBASIC4.25□□□□□ -1.73
HLA-DOBP13765 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
HLA-DOBP13765 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HLA-DOBP13765 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.24□□□□□ -1.73
HLA-DOBP13765 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HLA-DOBP13765 AC006042.3-201ENST00000454684 1469 ntBASIC4.24□□□□□ -1.73
HLA-DOBP13765 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
HLA-DOBP13765 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.24□□□□□ -1.73
HLA-DOBP13765 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HLA-DOBP13765 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HLA-DOBP13765 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HLA-DOBP13765 AC046144.1-201ENST00000478559 1853 ntBASIC4.24□□□□□ -1.73
HLA-DOBP13765 AP001642.1-201ENST00000624727 2117 ntBASIC4.24□□□□□ -1.73
HLA-DOBP13765 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HLA-DOBP13765 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.24□□□□□ -1.73
HLA-DOBP13765 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
HLA-DOBP13765 RNU6-249P-201ENST00000363016 102 ntBASIC4.24□□□□□ -1.73
HLA-DOBP13765 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.24□□□□□ -1.73
HLA-DOBP13765 RNU6-83P-201ENST00000384568 112 ntBASIC4.24□□□□□ -1.73
HLA-DOBP13765 AL645733.1-201ENST00000402250 217 ntBASIC4.24□□□□□ -1.73
HLA-DOBP13765 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC4.24□□□□□ -1.73
HLA-DOBP13765 SETP15-201ENST00000412724 337 ntBASIC4.24□□□□□ -1.73
HLA-DOBP13765 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.24□□□□□ -1.73
HLA-DOBP13765 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.24□□□□□ -1.73
HLA-DOBP13765 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC4.24□□□□□ -1.73
HLA-DOBP13765 GAPDHP49-201ENST00000421421 961 ntBASIC4.24□□□□□ -1.73
HLA-DOBP13765 RPL7P57-201ENST00000423238 740 ntBASIC4.24□□□□□ -1.73
HLA-DOBP13765 AC007559.1-201ENST00000428736 355 ntBASIC4.24□□□□□ -1.73
HLA-DOBP13765 TXNL1P1-201ENST00000429528 554 ntBASIC4.24□□□□□ -1.73
HLA-DOBP13765 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
HLA-DOBP13765 NMNAT1P2-201ENST00000435192 860 ntBASIC4.24□□□□□ -1.73
HLA-DOBP13765 AP000936.3-201ENST00000438127 255 ntBASIC4.24□□□□□ -1.73
HLA-DOBP13765 Z99714.1-201ENST00000450463 807 ntBASIC4.24□□□□□ -1.73
HLA-DOBP13765 MRPL42P4-201ENST00000453267 443 ntBASIC4.24□□□□□ -1.73
HLA-DOBP13765 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC4.24□□□□□ -1.73
HLA-DOBP13765 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC4.24□□□□□ -1.73
HLA-DOBP13765 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC4.24□□□□□ -1.73
HLA-DOBP13765 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC4.24□□□□□ -1.73
HLA-DOBP13765 RN7SL329P-201ENST00000467740 299 ntBASIC4.24□□□□□ -1.73
HLA-DOBP13765 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC4.24□□□□□ -1.73
HLA-DOBP13765 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.24□□□□□ -1.73
HLA-DOBP13765 AC104971.1-201ENST00000495117 578 ntBASIC4.24□□□□□ -1.73
HLA-DOBP13765 RPL5P23-201ENST00000496040 868 ntBASIC4.24□□□□□ -1.73
HLA-DOBP13765 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.24□□□□□ -1.73
HLA-DOBP13765 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.24□□□□□ -1.73
HLA-DOBP13765 AC010486.2-201ENST00000505572 483 ntBASIC4.24□□□□□ -1.73
HLA-DOBP13765 AC073358.1-201ENST00000505671 684 ntBASIC4.24□□□□□ -1.73
HLA-DOBP13765 AC118282.2-201ENST00000508739 374 ntBASIC4.24□□□□□ -1.73
HLA-DOBP13765 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.24□□□□□ -1.73
HLA-DOBP13765 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.24□□□□□ -1.73
HLA-DOBP13765 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HLA-DOBP13765 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.24□□□□□ -1.73
HLA-DOBP13765 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.24□□□□□ -1.73
HLA-DOBP13765 AP000926.4-201ENST00000527351 454 ntBASIC4.24□□□□□ -1.73
HLA-DOBP13765 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HLA-DOBP13765 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC4.24□□□□□ -1.73
HLA-DOBP13765 AP001880.2-201ENST00000538233 448 ntBASIC4.24□□□□□ -1.73
HLA-DOBP13765 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HLA-DOBP13765 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.24□□□□□ -1.73
HLA-DOBP13765 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC4.24□□□□□ -1.73
HLA-DOBP13765 NIFKP8-201ENST00000560500 874 ntBASIC4.24□□□□□ -1.73
HLA-DOBP13765 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.24□□□□□ -1.73
HLA-DOBP13765 AADACP1-206ENST00000561502 1193 ntBASIC4.24□□□□□ -1.73
HLA-DOBP13765 BGLT3-201ENST00000564523 994 ntBASIC4.24□□□□□ -1.73
HLA-DOBP13765 MIR3912-201ENST00000577566 105 ntBASIC4.24□□□□□ -1.73
HLA-DOBP13765 MIR4675-201ENST00000577898 77 ntBASIC4.24□□□□□ -1.73
HLA-DOBP13765 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC4.24□□□□□ -1.73
HLA-DOBP13765 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC4.24□□□□□ -1.73
HLA-DOBP13765 AC090312.2-201ENST00000582687 378 ntBASIC4.24□□□□□ -1.73
HLA-DOBP13765 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC4.24□□□□□ -1.73
HLA-DOBP13765 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HLA-DOBP13765 uc_338.9-201ENST00000617424 182 ntBASIC4.24□□□□□ -1.73
HLA-DOBP13765 AC015871.5-202ENST00000623252 701 ntBASIC4.24□□□□□ -1.73
HLA-DOBP13765 AP003399.1-201ENST00000637534 361 ntBASIC4.24□□□□□ -1.73
HLA-DOBP13765 AL359922.3-201ENST00000624779 1670 ntBASIC4.24□□□□□ -1.73
HLA-DOBP13765 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
HLA-DOBP13765 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HLA-DOBP13765 RNF6P1-201ENST00000444889 1784 ntBASIC4.24□□□□□ -1.73
HLA-DOBP13765 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HLA-DOBP13765 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HLA-DOBP13765 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.24□□□□□ -1.73
HLA-DOBP13765 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.24□□□□□ -1.73
HLA-DOBP13765 AL442639.1-201ENST00000625030 1899 ntBASIC4.24□□□□□ -1.73
HLA-DOBP13765 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.24□□□□□ -1.73
HLA-DOBP13765 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
HLA-DOBP13765 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.24□□□□□ -1.73
HLA-DOBP13765 AC131971.1-201ENST00000332881 1482 ntBASIC4.24□□□□□ -1.73
HLA-DOBP13765 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HLA-DOBP13765 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HLA-DOBP13765 BX005019.1-201ENST00000561881 1810 ntBASIC4.23□□□□□ -1.73
HLA-DOBP13765 AC097461.1-201ENST00000568928 2821 ntBASIC4.23□□□□□ -1.73
HLA-DOBP13765 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
HLA-DOBP13765 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
HLA-DOBP13765 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HLA-DOBP13765 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms