Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AC116563.2-201ENST00000624751 535 ntBASIC4.89□□□□□ -1.63
RB1P06400 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.89□□□□□ -1.63
RB1P06400 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
RB1P06400 LINC01808-202ENST00000641680 1116 ntBASIC4.89□□□□□ -1.63
RB1P06400 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
RB1P06400 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RB1P06400 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.89□□□□□ -1.63
RB1P06400 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
RB1P06400 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RB1P06400 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.88□□□□□ -1.63
RB1P06400 NEAT1-202ENST00000501122 22743 ntBASIC4.88□□□□□ -1.63
RB1P06400 SMG1P4-204ENST00000523028 4131 ntBASIC4.88□□□□□ -1.63
RB1P06400 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.88□□□□□ -1.63
RB1P06400 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
RB1P06400 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
RB1P06400 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RB1P06400 OR5P1P-201ENST00000299512 925 ntBASIC4.88□□□□□ -1.63
RB1P06400 RN7SKP280-201ENST00000364196 304 ntBASIC4.88□□□□□ -1.63
RB1P06400 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
RB1P06400 AP000580.1-201ENST00000404439 358 ntBASIC4.88□□□□□ -1.63
RB1P06400 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.88□□□□□ -1.63
RB1P06400 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.88□□□□□ -1.63
RB1P06400 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.88□□□□□ -1.63
RB1P06400 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.88□□□□□ -1.63
RB1P06400 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.88□□□□□ -1.63
RB1P06400 RPS20P1-201ENST00000434853 354 ntBASIC4.88□□□□□ -1.63
RB1P06400 OR4C10P-201ENST00000434991 931 ntBASIC4.88□□□□□ -1.63
RB1P06400 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC4.88□□□□□ -1.63
RB1P06400 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.88□□□□□ -1.63
RB1P06400 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.88□□□□□ -1.63
RB1P06400 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC4.88□□□□□ -1.63
RB1P06400 RPL23AP93-201ENST00000440847 484 ntBASIC4.88□□□□□ -1.63
RB1P06400 AL357520.1-201ENST00000441557 453 ntBASIC4.88□□□□□ -1.63
RB1P06400 GTF3AP5-201ENST00000442645 697 ntBASIC4.88□□□□□ -1.63
RB1P06400 HSFY3P-201ENST00000444242 1191 ntBASIC4.88□□□□□ -1.63
RB1P06400 Z95327.1-201ENST00000446082 482 ntBASIC4.88□□□□□ -1.63
RB1P06400 AC068135.1-201ENST00000446164 246 ntBASIC4.88□□□□□ -1.63
RB1P06400 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.88□□□□□ -1.63
RB1P06400 FCF1P6-201ENST00000456841 595 ntBASIC4.88□□□□□ -1.63
RB1P06400 AC245028.2-201ENST00000458673 253 ntBASIC4.88□□□□□ -1.63
RB1P06400 SNORA84-201ENST00000459229 133 ntBASIC4.88□□□□□ -1.63
RB1P06400 AC053481.1-201ENST00000467217 306 ntBASIC4.88□□□□□ -1.63
RB1P06400 TRBV8-2-201ENST00000475637 270 ntBASIC4.88□□□□□ -1.63
RB1P06400 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.88□□□□□ -1.63
RB1P06400 RN7SL604P-201ENST00000492589 296 ntBASIC4.88□□□□□ -1.63
RB1P06400 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC4.88□□□□□ -1.63
RB1P06400 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC4.88□□□□□ -1.63
RB1P06400 AC010285.3-201ENST00000511668 676 ntBASIC4.88□□□□□ -1.63
RB1P06400 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RB1P06400 AF186190.1-201ENST00000517470 480 ntBASIC4.88□□□□□ -1.63
RB1P06400 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.88□□□□□ -1.63
RB1P06400 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC4.88□□□□□ -1.63
RB1P06400 CD69-203ENST00000536709 1020 ntTSL 2 BASIC4.88□□□□□ -1.63
RB1P06400 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.88□□□□□ -1.63
RB1P06400 FKBP1BP1-201ENST00000553366 325 ntBASIC4.88□□□□□ -1.63
RB1P06400 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RB1P06400 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.88□□□□□ -1.63
RB1P06400 AC090666.1-201ENST00000578241 445 ntBASIC4.88□□□□□ -1.63
RB1P06400 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.88□□□□□ -1.63
RB1P06400 AC006946.3-201ENST00000609791 756 ntBASIC4.88□□□□□ -1.63
RB1P06400 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.88□□□□□ -1.63
RB1P06400 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
RB1P06400 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
RB1P06400 AL451142.2-201ENST00000429076 2090 ntBASIC4.88□□□□□ -1.63
RB1P06400 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.88□□□□□ -1.63
RB1P06400 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
RB1P06400 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RB1P06400 AC005261.4-201ENST00000600047 1385 ntBASIC4.88□□□□□ -1.63
RB1P06400 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
RB1P06400 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.88□□□□□ -1.63
RB1P06400 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.88□□□□□ -1.63
RB1P06400 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RB1P06400 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RB1P06400 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RB1P06400 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RB1P06400 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
RB1P06400 ZNF849P-201ENST00000594711 1566 ntBASIC4.87□□□□□ -1.63
RB1P06400 AC017104.4-201ENST00000636283 1592 ntBASIC4.87□□□□□ -1.63
RB1P06400 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.87□□□□□ -1.63
RB1P06400 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RB1P06400 AC234772.1-201ENST00000377927 937 ntBASIC4.87□□□□□ -1.63
RB1P06400 RNU1-13P-201ENST00000384499 162 ntBASIC4.87□□□□□ -1.63
RB1P06400 AL022722.2-201ENST00000402519 180 ntBASIC4.87□□□□□ -1.63
RB1P06400 MIR1303-201ENST00000408625 86 ntBASIC4.87□□□□□ -1.63
RB1P06400 CTSL3P-202ENST00000412179 788 ntBASIC4.87□□□□□ -1.63
RB1P06400 GSTM3P2-201ENST00000412746 530 ntBASIC4.87□□□□□ -1.63
RB1P06400 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC4.87□□□□□ -1.63
RB1P06400 AC013410.2-201ENST00000422627 201 ntBASIC4.87□□□□□ -1.63
RB1P06400 NPM1P24-201ENST00000428039 894 ntBASIC4.87□□□□□ -1.63
RB1P06400 AP001324.1-201ENST00000428553 399 ntBASIC4.87□□□□□ -1.63
RB1P06400 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RB1P06400 RPS7P2-201ENST00000435134 607 ntBASIC4.87□□□□□ -1.63
RB1P06400 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC4.87□□□□□ -1.63
RB1P06400 TPTE2P6-202ENST00000445572 1007 ntBASIC4.87□□□□□ -1.63
RB1P06400 TPMTP4-201ENST00000450749 678 ntBASIC4.87□□□□□ -1.63
RB1P06400 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.87□□□□□ -1.63
RB1P06400 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC4.87□□□□□ -1.63
RB1P06400 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.87□□□□□ -1.63
RB1P06400 AC008565.1-201ENST00000509046 885 ntBASIC4.87□□□□□ -1.63
RB1P06400 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms