Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
HLA-DPB1P04440 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HLA-DPB1P04440 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC3.63□□□□□ -1.83
HLA-DPB1P04440 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.63□□□□□ -1.83
HLA-DPB1P04440 CCT8P1-201ENST00000413611 1657 ntBASIC3.63□□□□□ -1.83
HLA-DPB1P04440 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
HLA-DPB1P04440 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.63□□□□□ -1.83
HLA-DPB1P04440 RNU1-14P-201ENST00000362759 152 ntBASIC3.63□□□□□ -1.83
HLA-DPB1P04440 RNU6-31P-201ENST00000384388 108 ntBASIC3.63□□□□□ -1.83
HLA-DPB1P04440 RNU4-25P-201ENST00000410569 230 ntBASIC3.63□□□□□ -1.83
HLA-DPB1P04440 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC3.63□□□□□ -1.83
HLA-DPB1P04440 P2RY10P2-201ENST00000416730 913 ntBASIC3.63□□□□□ -1.83
HLA-DPB1P04440 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC3.63□□□□□ -1.83
HLA-DPB1P04440 AC023141.6-201ENST00000429418 337 ntBASIC3.63□□□□□ -1.83
HLA-DPB1P04440 AC016712.1-201ENST00000431088 378 ntBASIC3.63□□□□□ -1.83
HLA-DPB1P04440 KCTD9P3-201ENST00000434597 1169 ntBASIC3.63□□□□□ -1.83
HLA-DPB1P04440 PPIAP17-201ENST00000438507 471 ntBASIC3.63□□□□□ -1.83
HLA-DPB1P04440 RPL23AP46-201ENST00000438548 490 ntBASIC3.63□□□□□ -1.83
HLA-DPB1P04440 HMGB3P9-201ENST00000441799 583 ntBASIC3.63□□□□□ -1.83
HLA-DPB1P04440 EEF1A1P1-201ENST00000447052 739 ntBASIC3.63□□□□□ -1.83
HLA-DPB1P04440 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.63□□□□□ -1.83
HLA-DPB1P04440 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC3.63□□□□□ -1.83
HLA-DPB1P04440 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC3.63□□□□□ -1.83
HLA-DPB1P04440 AC106806.2-201ENST00000509365 500 ntBASIC3.63□□□□□ -1.83
HLA-DPB1P04440 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.63□□□□□ -1.83
HLA-DPB1P04440 AC026726.1-201ENST00000512859 601 ntBASIC3.63□□□□□ -1.83
HLA-DPB1P04440 AF186190.1-201ENST00000517470 480 ntBASIC3.63□□□□□ -1.83
HLA-DPB1P04440 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HLA-DPB1P04440 HIGD1AP18-201ENST00000520730 278 ntBASIC3.63□□□□□ -1.83
HLA-DPB1P04440 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.63□□□□□ -1.83
HLA-DPB1P04440 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.63□□□□□ -1.83
HLA-DPB1P04440 PSMB7P1-201ENST00000556349 514 ntBASIC3.63□□□□□ -1.83
HLA-DPB1P04440 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.63□□□□□ -1.83
HLA-DPB1P04440 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.63□□□□□ -1.83
HLA-DPB1P04440 ARF4P1-201ENST00000605447 541 ntBASIC3.63□□□□□ -1.83
HLA-DPB1P04440 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3.63□□□□□ -1.83
HLA-DPB1P04440 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC3.63□□□□□ -1.83
HLA-DPB1P04440 AC009032.1-201ENST00000617574 431 ntBASIC3.63□□□□□ -1.83
HLA-DPB1P04440 OR5AC4P-202ENST00000642086 985 ntBASIC3.63□□□□□ -1.83
HLA-DPB1P04440 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
HLA-DPB1P04440 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HLA-DPB1P04440 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
HLA-DPB1P04440 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HLA-DPB1P04440 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HLA-DPB1P04440 UBE3AP2-201ENST00000429033 2259 ntBASIC3.63□□□□□ -1.83
HLA-DPB1P04440 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.63□□□□□ -1.83
HLA-DPB1P04440 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
HLA-DPB1P04440 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
HLA-DPB1P04440 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
HLA-DPB1P04440 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
HLA-DPB1P04440 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HLA-DPB1P04440 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC3.62□□□□□ -1.83
HLA-DPB1P04440 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
HLA-DPB1P04440 AC126755.2-208ENST00000327792 462 ntBASIC3.62□□□□□ -1.83
HLA-DPB1P04440 AC138969.1-213ENST00000331436 462 ntBASIC3.62□□□□□ -1.83
HLA-DPB1P04440 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HLA-DPB1P04440 RNU1-18P-201ENST00000363062 164 ntBASIC3.62□□□□□ -1.83
HLA-DPB1P04440 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
HLA-DPB1P04440 MIR1251-201ENST00000408552 70 ntBASIC3.62□□□□□ -1.83
HLA-DPB1P04440 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC3.62□□□□□ -1.83
HLA-DPB1P04440 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC3.62□□□□□ -1.83
HLA-DPB1P04440 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC3.62□□□□□ -1.83
HLA-DPB1P04440 FAR2P4-202ENST00000425399 584 ntBASIC3.62□□□□□ -1.83
HLA-DPB1P04440 NDUFA5P10-201ENST00000432147 357 ntBASIC3.62□□□□□ -1.83
HLA-DPB1P04440 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.62□□□□□ -1.83
HLA-DPB1P04440 ACTR3P2-201ENST00000439585 1257 ntBASIC3.62□□□□□ -1.83
HLA-DPB1P04440 AL627224.1-201ENST00000448334 444 ntBASIC3.62□□□□□ -1.83
HLA-DPB1P04440 MTND3P4-201ENST00000453537 303 ntBASIC3.62□□□□□ -1.83
HLA-DPB1P04440 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC3.62□□□□□ -1.83
HLA-DPB1P04440 DNAJC19P1-201ENST00000455312 319 ntBASIC3.62□□□□□ -1.83
HLA-DPB1P04440 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC3.62□□□□□ -1.83
HLA-DPB1P04440 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC3.62□□□□□ -1.83
HLA-DPB1P04440 AC041039.1-201ENST00000485656 536 ntBASIC3.62□□□□□ -1.83
HLA-DPB1P04440 RPL35P6-201ENST00000490024 372 ntBASIC3.62□□□□□ -1.83
HLA-DPB1P04440 RN7SL691P-201ENST00000494487 301 ntBASIC3.62□□□□□ -1.83
HLA-DPB1P04440 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
HLA-DPB1P04440 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC3.62□□□□□ -1.83
HLA-DPB1P04440 AC008958.1-201ENST00000511047 682 ntBASIC3.62□□□□□ -1.83
HLA-DPB1P04440 AC108471.1-201ENST00000513977 287 ntBASIC3.62□□□□□ -1.83
HLA-DPB1P04440 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC3.62□□□□□ -1.83
HLA-DPB1P04440 RNU7-143P-201ENST00000516781 65 ntBASIC3.62□□□□□ -1.83
HLA-DPB1P04440 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC3.62□□□□□ -1.83
HLA-DPB1P04440 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC3.62□□□□□ -1.83
HLA-DPB1P04440 RPL23AP87-202ENST00000573039 466 ntBASIC3.62□□□□□ -1.83
HLA-DPB1P04440 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.62□□□□□ -1.83
HLA-DPB1P04440 MIR4284-201ENST00000578924 81 ntBASIC3.62□□□□□ -1.83
HLA-DPB1P04440 AC012417.1-201ENST00000582307 1039 ntBASIC3.62□□□□□ -1.83
HLA-DPB1P04440 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.62□□□□□ -1.83
HLA-DPB1P04440 MIMT1-201ENST00000597105 1050 ntBASIC3.62□□□□□ -1.83
HLA-DPB1P04440 IPO5P1-202ENST00000600039 287 ntBASIC3.62□□□□□ -1.83
HLA-DPB1P04440 AC119501.1-201ENST00000603646 475 ntBASIC3.62□□□□□ -1.83
HLA-DPB1P04440 AL023583.1-201ENST00000607518 1143 ntBASIC3.62□□□□□ -1.83
HLA-DPB1P04440 AC020658.4-201ENST00000613987 684 ntBASIC3.62□□□□□ -1.83
HLA-DPB1P04440 AC090246.1-201ENST00000616499 426 ntBASIC3.62□□□□□ -1.83
HLA-DPB1P04440 MIR6758-201ENST00000620653 63 ntBASIC3.62□□□□□ -1.83
HLA-DPB1P04440 AC104820.1-201ENST00000624183 307 ntBASIC3.62□□□□□ -1.83
HLA-DPB1P04440 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.62□□□□□ -1.83
HLA-DPB1P04440 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.62□□□□□ -1.83
HLA-DPB1P04440 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HLA-DPB1P04440 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms