Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 RPS29P19-201ENST00000479709 171 ntBASIC3.9□□□□□ -1.79
P04436 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC3.9□□□□□ -1.79
P04436 AC025459.1-201ENST00000504072 156 ntBASIC3.9□□□□□ -1.79
P04436 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.9□□□□□ -1.79
P04436 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.9□□□□□ -1.79
P04436 IGHVIII-2-1-201ENST00000518843 291 ntBASIC3.9□□□□□ -1.79
P04436 AC090819.1-201ENST00000523800 1111 ntBASIC3.9□□□□□ -1.79
P04436 AC006064.5-201ENST00000541782 248 ntBASIC3.9□□□□□ -1.79
P04436 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
P04436 AL109766.1-201ENST00000555080 552 ntBASIC3.9□□□□□ -1.79
P04436 AL109741.3-201ENST00000561748 592 ntBASIC3.9□□□□□ -1.79
P04436 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC3.9□□□□□ -1.79
P04436 AC007390.2-201ENST00000606229 3803 ntBASIC3.9□□□□□ -1.79
P04436 AL355802.4-201ENST00000607635 548 ntBASIC3.9□□□□□ -1.79
P04436 AL096803.3-201ENST00000609032 532 ntBASIC3.9□□□□□ -1.79
P04436 AC104307.1-201ENST00000616142 196 ntBASIC3.9□□□□□ -1.79
P04436 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
P04436 AL445363.3-201ENST00000623080 671 ntBASIC3.9□□□□□ -1.79
P04436 AC015726.3-201ENST00000624501 418 ntBASIC3.9□□□□□ -1.79
P04436 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
P04436 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.9□□□□□ -1.79
P04436 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
P04436 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
P04436 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.9□□□□□ -1.79
P04436 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.9□□□□□ -1.79
P04436 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC3.9□□□□□ -1.79
P04436 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
P04436 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
P04436 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
P04436 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.89□□□□□ -1.79
P04436 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
P04436 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
P04436 AL133243.3-201ENST00000617415 3004 ntBASIC3.89□□□□□ -1.79
P04436 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
P04436 FABP12P1-201ENST00000401911 322 ntBASIC3.89□□□□□ -1.79
P04436 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.89□□□□□ -1.79
P04436 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC3.89□□□□□ -1.79
P04436 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.89□□□□□ -1.79
P04436 CR848007.2-201ENST00000424918 787 ntBASIC3.89□□□□□ -1.79
P04436 AC073335.1-201ENST00000427776 363 ntBASIC3.89□□□□□ -1.79
P04436 AC004975.1-201ENST00000428733 208 ntBASIC3.89□□□□□ -1.79
P04436 BTF3P10-201ENST00000433415 495 ntBASIC3.89□□□□□ -1.79
P04436 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.89□□□□□ -1.79
P04436 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC3.89□□□□□ -1.79
P04436 MTND2P8-201ENST00000450555 1025 ntBASIC3.89□□□□□ -1.79
P04436 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC3.89□□□□□ -1.79
P04436 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC3.89□□□□□ -1.79
P04436 RPS7P7-201ENST00000463499 571 ntBASIC3.89□□□□□ -1.79
P04436 SSR3-208ENST00000496050 579 ntTSL 4 BASIC3.89□□□□□ -1.79
P04436 AC023050.1-201ENST00000498198 304 ntBASIC3.89□□□□□ -1.79
P04436 ARL4AP1-201ENST00000503220 705 ntBASIC3.89□□□□□ -1.79
P04436 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC3.89□□□□□ -1.79
P04436 AC010285.3-201ENST00000511668 676 ntBASIC3.89□□□□□ -1.79
P04436 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC3.89□□□□□ -1.79
P04436 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC3.89□□□□□ -1.79
P04436 AL161729.3-201ENST00000603533 673 ntBASIC3.89□□□□□ -1.79
P04436 AC005034.4-201ENST00000603612 899 ntBASIC3.89□□□□□ -1.79
P04436 AC020910.2-201ENST00000603635 610 ntBASIC3.89□□□□□ -1.79
P04436 AC012467.1-201ENST00000607740 256 ntBASIC3.89□□□□□ -1.79
P04436 AL354696.1-201ENST00000614652 497 ntBASIC3.89□□□□□ -1.79
P04436 AC007546.1-201ENST00000619452 559 ntBASIC3.89□□□□□ -1.79
P04436 AC090506.2-201ENST00000624521 419 ntBASIC3.89□□□□□ -1.79
P04436 CR392039.4-201ENST00000624968 501 ntBASIC3.89□□□□□ -1.79
P04436 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC3.89□□□□□ -1.79
P04436 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
P04436 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC3.89□□□□□ -1.79
P04436 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
P04436 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
P04436 SAGE2P-201ENST00000420011 2126 ntBASIC3.89□□□□□ -1.79
P04436 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.89□□□□□ -1.79
P04436 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
P04436 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
P04436 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
P04436 DDX6P1-205ENST00000441966 1436 ntBASIC3.88□□□□□ -1.79
P04436 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC3.88□□□□□ -1.79
P04436 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
P04436 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
P04436 AC007529.1-201ENST00000418574 2178 ntBASIC3.88□□□□□ -1.79
P04436 SUPT16HP1-201ENST00000537175 3133 ntBASIC3.88□□□□□ -1.79
P04436 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
P04436 OR52B1P-201ENST00000316506 909 ntBASIC3.88□□□□□ -1.79
P04436 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
P04436 SNORD66.1-201ENST00000391230 76 ntBASIC3.88□□□□□ -1.79
P04436 AL022722.2-201ENST00000402519 180 ntBASIC3.88□□□□□ -1.79
P04436 MIR1179-201ENST00000408703 91 ntBASIC3.88□□□□□ -1.79
P04436 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC3.88□□□□□ -1.79
P04436 RPL30P3-201ENST00000424262 333 ntBASIC3.88□□□□□ -1.79
P04436 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC3.88□□□□□ -1.79
P04436 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC3.88□□□□□ -1.79
P04436 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.88□□□□□ -1.79
P04436 RPS27AP13-201ENST00000498403 237 ntBASIC3.88□□□□□ -1.79
P04436 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC3.88□□□□□ -1.79
P04436 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
P04436 HMGB1P19-201ENST00000517578 577 ntBASIC3.88□□□□□ -1.79
P04436 PHBP17-201ENST00000528576 541 ntBASIC3.88□□□□□ -1.79
P04436 AC105233.3-201ENST00000531125 744 ntBASIC3.88□□□□□ -1.79
P04436 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.88□□□□□ -1.79
P04436 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC3.88□□□□□ -1.79
P04436 AC025884.1-201ENST00000556034 378 ntBASIC3.88□□□□□ -1.79
P04436 AC007224.1-201ENST00000564410 144 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms