Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
APOEP02649 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.24□□□□□ -1.73
APOEP02649 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC4.24□□□□□ -1.73
APOEP02649 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
APOEP02649 AL049555.1-201ENST00000562834 1933 ntBASIC4.23□□□□□ -1.73
APOEP02649 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
APOEP02649 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
APOEP02649 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
APOEP02649 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.23□□□□□ -1.73
APOEP02649 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.23□□□□□ -1.73
APOEP02649 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
APOEP02649 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
APOEP02649 RNU6-628P-201ENST00000410675 107 ntBASIC4.23□□□□□ -1.73
APOEP02649 OR8G2P-201ENST00000412796 908 ntBASIC4.23□□□□□ -1.73
APOEP02649 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.23□□□□□ -1.73
APOEP02649 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC4.23□□□□□ -1.73
APOEP02649 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.23□□□□□ -1.73
APOEP02649 BTG3P1-201ENST00000435859 716 ntBASIC4.23□□□□□ -1.73
APOEP02649 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
APOEP02649 AC006326.1-201ENST00000445465 787 ntBASIC4.23□□□□□ -1.73
APOEP02649 EXTL2P1-201ENST00000446218 416 ntBASIC4.23□□□□□ -1.73
APOEP02649 AC092691.2-201ENST00000461787 803 ntBASIC4.23□□□□□ -1.73
APOEP02649 RPS26P15-201ENST00000488067 348 ntBASIC4.23□□□□□ -1.73
APOEP02649 AL132838.2-201ENST00000492041 314 ntBASIC4.23□□□□□ -1.73
APOEP02649 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.23□□□□□ -1.73
APOEP02649 KRT19P6-201ENST00000510983 209 ntBASIC4.23□□□□□ -1.73
APOEP02649 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.23□□□□□ -1.73
APOEP02649 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.23□□□□□ -1.73
APOEP02649 AC007599.1-201ENST00000568688 1174 ntBASIC4.23□□□□□ -1.73
APOEP02649 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.23□□□□□ -1.73
APOEP02649 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
APOEP02649 AC114878.2-201ENST00000604863 1251 ntBASIC4.23□□□□□ -1.73
APOEP02649 AC017076.1-201ENST00000607613 578 ntBASIC4.23□□□□□ -1.73
APOEP02649 AC096586.2-201ENST00000610260 441 ntBASIC4.23□□□□□ -1.73
APOEP02649 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.23□□□□□ -1.73
APOEP02649 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.23□□□□□ -1.73
APOEP02649 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
APOEP02649 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.23□□□□□ -1.73
APOEP02649 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
APOEP02649 CASC19-261ENST00000641853 1638 ntBASIC4.23□□□□□ -1.73
APOEP02649 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
APOEP02649 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
APOEP02649 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
APOEP02649 RLIMP1-201ENST00000339626 1680 ntBASIC4.22□□□□□ -1.73
APOEP02649 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.22□□□□□ -1.73
APOEP02649 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.22□□□□□ -1.73
APOEP02649 RNU6-1331P-201ENST00000363658 106 ntBASIC4.22□□□□□ -1.73
APOEP02649 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.22□□□□□ -1.73
APOEP02649 SNORA3C-201ENST00000408792 125 ntBASIC4.22□□□□□ -1.73
APOEP02649 RN7SKP263-201ENST00000411194 309 ntBASIC4.22□□□□□ -1.73
APOEP02649 AC098592.2-201ENST00000413158 265 ntBASIC4.22□□□□□ -1.73
APOEP02649 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
APOEP02649 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.22□□□□□ -1.73
APOEP02649 AC115285.1-201ENST00000424879 736 ntBASIC4.22□□□□□ -1.73
APOEP02649 SEC63P1-201ENST00000425785 1258 ntBASIC4.22□□□□□ -1.73
APOEP02649 OR4C10P-201ENST00000434991 931 ntBASIC4.22□□□□□ -1.73
APOEP02649 AL356276.2-201ENST00000435919 558 ntBASIC4.22□□□□□ -1.73
APOEP02649 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
APOEP02649 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.22□□□□□ -1.73
APOEP02649 RPL5P32-201ENST00000454085 879 ntBASIC4.22□□□□□ -1.73
APOEP02649 RPL21P71-201ENST00000465598 459 ntBASIC4.22□□□□□ -1.73
APOEP02649 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.22□□□□□ -1.73
APOEP02649 AC110792.1-201ENST00000491826 472 ntBASIC4.22□□□□□ -1.73
APOEP02649 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC4.22□□□□□ -1.73
APOEP02649 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC4.22□□□□□ -1.73
APOEP02649 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.22□□□□□ -1.73
APOEP02649 OR7E10P-201ENST00000526420 991 ntBASIC4.22□□□□□ -1.73
APOEP02649 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.22□□□□□ -1.73
APOEP02649 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.22□□□□□ -1.73
APOEP02649 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.22□□□□□ -1.73
APOEP02649 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.22□□□□□ -1.73
APOEP02649 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.22□□□□□ -1.73
APOEP02649 SS18L2P2-201ENST00000583960 235 ntBASIC4.22□□□□□ -1.73
APOEP02649 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.22□□□□□ -1.73
APOEP02649 AC015911.5-201ENST00000587076 451 ntBASIC4.22□□□□□ -1.73
APOEP02649 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
APOEP02649 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
APOEP02649 VN1R81P-201ENST00000602085 372 ntBASIC4.22□□□□□ -1.73
APOEP02649 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.22□□□□□ -1.73
APOEP02649 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
APOEP02649 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
APOEP02649 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
APOEP02649 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
APOEP02649 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
APOEP02649 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.21□□□□□ -1.73
APOEP02649 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.21□□□□□ -1.74
APOEP02649 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.21□□□□□ -1.74
APOEP02649 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
APOEP02649 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.21□□□□□ -1.74
APOEP02649 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.21□□□□□ -1.74
APOEP02649 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
APOEP02649 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.21□□□□□ -1.74
APOEP02649 OR13C3-201ENST00000374781 1108 ntBASIC4.21□□□□□ -1.74
APOEP02649 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
APOEP02649 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
APOEP02649 AL138878.1-201ENST00000405131 347 ntBASIC4.21□□□□□ -1.74
APOEP02649 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC4.21□□□□□ -1.74
APOEP02649 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.21□□□□□ -1.74
APOEP02649 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.21□□□□□ -1.74
APOEP02649 MTND2P11-201ENST00000423638 648 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 132.4 ms