Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
COL1A1P02452 AC011471.1-201ENST00000585766 187 ntBASIC4.62□□□□□ -1.67
COL1A1P02452 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.62□□□□□ -1.67
COL1A1P02452 AC119674.1-207ENST00000641355 633 ntBASIC4.62□□□□□ -1.67
COL1A1P02452 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
COL1A1P02452 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
COL1A1P02452 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
COL1A1P02452 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
COL1A1P02452 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
COL1A1P02452 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
COL1A1P02452 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
COL1A1P02452 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
COL1A1P02452 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.62□□□□□ -1.67
COL1A1P02452 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
COL1A1P02452 ATP5A1P2-201ENST00000412323 255 ntBASIC4.62□□□□□ -1.67
COL1A1P02452 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC4.62□□□□□ -1.67
COL1A1P02452 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC4.62□□□□□ -1.67
COL1A1P02452 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC4.62□□□□□ -1.67
COL1A1P02452 HSPD1P21-201ENST00000436541 245 ntBASIC4.62□□□□□ -1.67
COL1A1P02452 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
COL1A1P02452 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.62□□□□□ -1.67
COL1A1P02452 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.62□□□□□ -1.67
COL1A1P02452 AL137849.1-201ENST00000604767 169 ntBASIC4.62□□□□□ -1.67
COL1A1P02452 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC4.62□□□□□ -1.67
COL1A1P02452 AP000255.1-201ENST00000610276 676 ntBASIC4.62□□□□□ -1.67
COL1A1P02452 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.61□□□□□ -1.67
COL1A1P02452 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.61□□□□□ -1.67
COL1A1P02452 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
COL1A1P02452 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
COL1A1P02452 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
COL1A1P02452 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.61□□□□□ -1.67
COL1A1P02452 AC011266.1-201ENST00000624119 3569 ntBASIC4.61□□□□□ -1.67
COL1A1P02452 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
COL1A1P02452 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
COL1A1P02452 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.61□□□□□ -1.67
COL1A1P02452 NDUFB4P4-201ENST00000404822 243 ntBASIC4.61□□□□□ -1.67
COL1A1P02452 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.61□□□□□ -1.67
COL1A1P02452 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.61□□□□□ -1.67
COL1A1P02452 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.61□□□□□ -1.67
COL1A1P02452 RN7SL293P-201ENST00000481765 281 ntBASIC4.61□□□□□ -1.67
COL1A1P02452 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.61□□□□□ -1.67
COL1A1P02452 RNA5SP154-201ENST00000516193 111 ntBASIC4.61□□□□□ -1.67
COL1A1P02452 MIR5195-201ENST00000583555 115 ntBASIC4.61□□□□□ -1.67
COL1A1P02452 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.61□□□□□ -1.67
COL1A1P02452 OR7A8P-201ENST00000595427 913 ntBASIC4.61□□□□□ -1.67
COL1A1P02452 SNORA62.6-201ENST00000606322 83 ntBASIC4.61□□□□□ -1.67
COL1A1P02452 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.61□□□□□ -1.67
COL1A1P02452 AL442067.2-201ENST00000614033 363 ntBASIC4.61□□□□□ -1.67
COL1A1P02452 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
COL1A1P02452 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.61□□□□□ -1.67
COL1A1P02452 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.6□□□□□ -1.67
COL1A1P02452 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
COL1A1P02452 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
COL1A1P02452 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
COL1A1P02452 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
COL1A1P02452 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
COL1A1P02452 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.6□□□□□ -1.67
COL1A1P02452 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
COL1A1P02452 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.6□□□□□ -1.67
COL1A1P02452 Y_RNA.111-201ENST00000363248 100 ntBASIC4.6□□□□□ -1.67
COL1A1P02452 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.6□□□□□ -1.67
COL1A1P02452 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.6□□□□□ -1.67
COL1A1P02452 ELOCP8-201ENST00000439309 332 ntBASIC4.6□□□□□ -1.67
COL1A1P02452 ELOCP15-201ENST00000442090 332 ntBASIC4.6□□□□□ -1.67
COL1A1P02452 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.6□□□□□ -1.67
COL1A1P02452 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.6□□□□□ -1.67
COL1A1P02452 RPS3AP46-201ENST00000448352 682 ntBASIC4.6□□□□□ -1.67
COL1A1P02452 AC007967.1-201ENST00000455422 1159 ntBASIC4.6□□□□□ -1.67
COL1A1P02452 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
COL1A1P02452 AC005726.1-201ENST00000494679 427 ntBASIC4.6□□□□□ -1.67
COL1A1P02452 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.6□□□□□ -1.67
COL1A1P02452 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.6□□□□□ -1.67
COL1A1P02452 MIR3922-201ENST00000585192 84 ntBASIC4.6□□□□□ -1.67
COL1A1P02452 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.6□□□□□ -1.67
COL1A1P02452 AL139089.1-201ENST00000620372 975 ntBASIC4.6□□□□□ -1.67
COL1A1P02452 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC4.6□□□□□ -1.67
COL1A1P02452 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
COL1A1P02452 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.6□□□□□ -1.67
COL1A1P02452 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.6□□□□□ -1.67
COL1A1P02452 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
COL1A1P02452 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.6□□□□□ -1.67
COL1A1P02452 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
COL1A1P02452 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
COL1A1P02452 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
COL1A1P02452 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
COL1A1P02452 MFSD8-236ENST00000641509 4050 ntBASIC4.59□□□□□ -1.67
COL1A1P02452 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC4.59□□□□□ -1.67
COL1A1P02452 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.67
COL1A1P02452 AC007068.1-201ENST00000396690 844 ntBASIC4.59□□□□□ -1.67
COL1A1P02452 RNA5SP306-201ENST00000411087 107 ntBASIC4.59□□□□□ -1.67
COL1A1P02452 AL035423.1-201ENST00000420331 213 ntBASIC4.59□□□□□ -1.67
COL1A1P02452 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.59□□□□□ -1.67
COL1A1P02452 SNORA71B-202ENST00000439232 272 ntBASIC4.59□□□□□ -1.67
COL1A1P02452 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.59□□□□□ -1.67
COL1A1P02452 SUN3-208ENST00000453192 801 ntTSL 5 BASIC4.59□□□□□ -1.67
COL1A1P02452 DEFB109D-201ENST00000529497 240 ntBASIC4.59□□□□□ -1.67
COL1A1P02452 DUX4L52-201ENST00000549363 777 ntBASIC4.59□□□□□ -1.67
COL1A1P02452 AC011270.1-201ENST00000558606 583 ntBASIC4.59□□□□□ -1.67
COL1A1P02452 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.59□□□□□ -1.67
COL1A1P02452 AC008638.3-201ENST00000603341 463 ntBASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 121.4 ms