Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 RN7SKP285-201ENST00000410137 318 ntBASIC3.06□□□□□ -1.92
SSSCA1O60232 RPL23AP26-201ENST00000412728 464 ntBASIC3.06□□□□□ -1.92
SSSCA1O60232 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC3.06□□□□□ -1.92
SSSCA1O60232 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
SSSCA1O60232 AL159169.1-201ENST00000421119 127 ntBASIC3.06□□□□□ -1.92
SSSCA1O60232 AC099336.2-201ENST00000422457 254 ntBASIC3.06□□□□□ -1.92
SSSCA1O60232 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC3.06□□□□□ -1.92
SSSCA1O60232 RPL23AP38-201ENST00000423801 469 ntBASIC3.06□□□□□ -1.92
SSSCA1O60232 BMS1P19-201ENST00000433925 393 ntBASIC3.06□□□□□ -1.92
SSSCA1O60232 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC3.06□□□□□ -1.92
SSSCA1O60232 CBX1P1-201ENST00000440184 427 ntBASIC3.06□□□□□ -1.92
SSSCA1O60232 TXNP2-201ENST00000443918 295 ntBASIC3.06□□□□□ -1.92
SSSCA1O60232 ANP32BP2-201ENST00000454525 545 ntBASIC3.06□□□□□ -1.92
SSSCA1O60232 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC3.06□□□□□ -1.92
SSSCA1O60232 RPS3AP50-201ENST00000487064 803 ntBASIC3.06□□□□□ -1.92
SSSCA1O60232 AC093720.1-201ENST00000505681 714 ntBASIC3.06□□□□□ -1.92
SSSCA1O60232 AC026784.1-201ENST00000507986 352 ntBASIC3.06□□□□□ -1.92
SSSCA1O60232 ARL2BPP6-201ENST00000512757 439 ntBASIC3.06□□□□□ -1.92
SSSCA1O60232 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC3.06□□□□□ -1.92
SSSCA1O60232 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SSSCA1O60232 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
SSSCA1O60232 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC3.06□□□□□ -1.92
SSSCA1O60232 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC3.06□□□□□ -1.92
SSSCA1O60232 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.06□□□□□ -1.92
SSSCA1O60232 MIR4425-201ENST00000580572 84 ntBASIC3.06□□□□□ -1.92
SSSCA1O60232 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SSSCA1O60232 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.06□□□□□ -1.92
SSSCA1O60232 OR7E18P-201ENST00000592589 702 ntBASIC3.06□□□□□ -1.92
SSSCA1O60232 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC3.06□□□□□ -1.92
SSSCA1O60232 AC022960.2-201ENST00000616300 666 ntBASIC3.06□□□□□ -1.92
SSSCA1O60232 MIR6729-201ENST00000618194 65 ntBASIC3.06□□□□□ -1.92
SSSCA1O60232 AC073530.2-201ENST00000623987 261 ntBASIC3.06□□□□□ -1.92
SSSCA1O60232 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.06□□□□□ -1.92
SSSCA1O60232 CASC19-255ENST00000641733 1385 ntBASIC3.06□□□□□ -1.92
SSSCA1O60232 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
SSSCA1O60232 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SSSCA1O60232 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.06□□□□□ -1.92
SSSCA1O60232 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
SSSCA1O60232 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.05□□□□□ -1.92
SSSCA1O60232 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SSSCA1O60232 XKRY2-202ENST00000623874 1581 ntBASIC3.05□□□□□ -1.92
SSSCA1O60232 XKRY-202ENST00000624960 1581 ntBASIC3.05□□□□□ -1.92
SSSCA1O60232 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SSSCA1O60232 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SSSCA1O60232 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
SSSCA1O60232 XIAPP3-201ENST00000312918 795 ntBASIC3.05□□□□□ -1.92
SSSCA1O60232 OR4K17-201ENST00000315543 1032 ntBASIC3.05□□□□□ -1.92
SSSCA1O60232 AC079741.1-201ENST00000321498 212 ntBASIC3.05□□□□□ -1.92
SSSCA1O60232 IGKV7-3-201ENST00000357453 298 ntBASIC3.05□□□□□ -1.92
SSSCA1O60232 RNA5SP366-201ENST00000365454 123 ntBASIC3.05□□□□□ -1.92
SSSCA1O60232 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.05□□□□□ -1.92
SSSCA1O60232 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
SSSCA1O60232 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
SSSCA1O60232 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.05□□□□□ -1.92
SSSCA1O60232 TRAPPC2P10-201ENST00000415662 323 ntBASIC3.05□□□□□ -1.92
SSSCA1O60232 AC119751.6-201ENST00000416712 186 ntBASIC3.05□□□□□ -1.92
SSSCA1O60232 HMGB3P20-201ENST00000417997 600 ntBASIC3.05□□□□□ -1.92
SSSCA1O60232 HMGB1P32-201ENST00000425971 565 ntBASIC3.05□□□□□ -1.92
SSSCA1O60232 AL691449.1-201ENST00000426570 421 ntBASIC3.05□□□□□ -1.92
SSSCA1O60232 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.05□□□□□ -1.92
SSSCA1O60232 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC3.05□□□□□ -1.92
SSSCA1O60232 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC3.05□□□□□ -1.92
SSSCA1O60232 OR52Y1P-201ENST00000452418 828 ntBASIC3.05□□□□□ -1.92
SSSCA1O60232 SNRPGP5-201ENST00000456003 220 ntBASIC3.05□□□□□ -1.92
SSSCA1O60232 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.05□□□□□ -1.92
SSSCA1O60232 AC013356.1-201ENST00000489027 564 ntBASIC3.05□□□□□ -1.92
SSSCA1O60232 RPS27AP13-201ENST00000498403 237 ntBASIC3.05□□□□□ -1.92
SSSCA1O60232 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC3.05□□□□□ -1.92
SSSCA1O60232 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC3.05□□□□□ -1.92
SSSCA1O60232 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC3.05□□□□□ -1.92
SSSCA1O60232 RN7SKP34-201ENST00000516142 244 ntBASIC3.05□□□□□ -1.92
SSSCA1O60232 RNU6-1231P-201ENST00000517185 103 ntBASIC3.05□□□□□ -1.92
SSSCA1O60232 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC3.05□□□□□ -1.92
SSSCA1O60232 TOMM20P2-201ENST00000540082 421 ntBASIC3.05□□□□□ -1.92
SSSCA1O60232 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC3.05□□□□□ -1.92
SSSCA1O60232 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC3.05□□□□□ -1.92
SSSCA1O60232 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.05□□□□□ -1.92
SSSCA1O60232 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.05□□□□□ -1.92
SSSCA1O60232 MIR4715-201ENST00000584117 79 ntBASIC3.05□□□□□ -1.92
SSSCA1O60232 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC3.05□□□□□ -1.92
SSSCA1O60232 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.05□□□□□ -1.92
SSSCA1O60232 AL354760.1-201ENST00000608357 643 ntBASIC3.05□□□□□ -1.92
SSSCA1O60232 RMST_8.1-201ENST00000610287 165 ntBASIC3.05□□□□□ -1.92
SSSCA1O60232 AC016957.2-201ENST00000616998 848 ntBASIC3.05□□□□□ -1.92
SSSCA1O60232 AC010608.2-201ENST00000624830 470 ntBASIC3.05□□□□□ -1.92
SSSCA1O60232 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SSSCA1O60232 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SSSCA1O60232 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.05□□□□□ -1.92
SSSCA1O60232 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SSSCA1O60232 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.05□□□□□ -1.92
SSSCA1O60232 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SSSCA1O60232 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SSSCA1O60232 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
SSSCA1O60232 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.04□□□□□ -1.92
SSSCA1O60232 AC007342.7-201ENST00000624610 2337 ntBASIC3.04□□□□□ -1.92
SSSCA1O60232 RIOK3P1-201ENST00000418778 1528 ntBASIC3.04□□□□□ -1.92
SSSCA1O60232 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
SSSCA1O60232 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
SSSCA1O60232 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SSSCA1O60232 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms