Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 RNA5SP391-201ENST00000363456 119 ntBASIC3.79□□□□□ -1.8
SRRM4A7MD48 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SRRM4A7MD48 MIR122-201ENST00000385044 85 ntBASIC3.79□□□□□ -1.8
SRRM4A7MD48 MIR323B-201ENST00000385269 82 ntBASIC3.79□□□□□ -1.8
SRRM4A7MD48 MTCO1P56-201ENST00000401674 224 ntBASIC3.79□□□□□ -1.8
SRRM4A7MD48 ZNF602P-201ENST00000405929 924 ntBASIC3.79□□□□□ -1.8
SRRM4A7MD48 AC233981.1-201ENST00000423224 461 ntBASIC3.79□□□□□ -1.8
SRRM4A7MD48 NPM1P34-201ENST00000428821 893 ntBASIC3.79□□□□□ -1.8
SRRM4A7MD48 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC3.79□□□□□ -1.8
SRRM4A7MD48 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SRRM4A7MD48 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC3.79□□□□□ -1.8
SRRM4A7MD48 CEACAMP7-201ENST00000444105 496 ntBASIC3.79□□□□□ -1.8
SRRM4A7MD48 MTCYBP42-201ENST00000444653 1130 ntBASIC3.79□□□□□ -1.8
SRRM4A7MD48 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.79□□□□□ -1.8
SRRM4A7MD48 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC3.79□□□□□ -1.8
SRRM4A7MD48 AC079168.2-201ENST00000453977 416 ntBASIC3.79□□□□□ -1.8
SRRM4A7MD48 RPS5P7-201ENST00000456664 608 ntBASIC3.79□□□□□ -1.8
SRRM4A7MD48 AC018635.1-201ENST00000468292 1030 ntBASIC3.79□□□□□ -1.8
SRRM4A7MD48 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC3.79□□□□□ -1.8
SRRM4A7MD48 RPL7AP6-201ENST00000477943 801 ntBASIC3.79□□□□□ -1.8
SRRM4A7MD48 AC069528.1-202ENST00000482888 637 ntBASIC3.79□□□□□ -1.8
SRRM4A7MD48 AC011037.1-201ENST00000483964 558 ntBASIC3.79□□□□□ -1.8
SRRM4A7MD48 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.79□□□□□ -1.8
SRRM4A7MD48 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.79□□□□□ -1.8
SRRM4A7MD48 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SRRM4A7MD48 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC3.79□□□□□ -1.8
SRRM4A7MD48 RN7SKP157-201ENST00000516174 282 ntBASIC3.79□□□□□ -1.8
SRRM4A7MD48 RNU1-6P-201ENST00000516290 144 ntBASIC3.79□□□□□ -1.8
SRRM4A7MD48 AF186190.1-201ENST00000517470 480 ntBASIC3.79□□□□□ -1.8
SRRM4A7MD48 IGHVIII-2-1-201ENST00000518843 291 ntBASIC3.79□□□□□ -1.8
SRRM4A7MD48 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.79□□□□□ -1.8
SRRM4A7MD48 MTND1P6-201ENST00000523621 946 ntBASIC3.79□□□□□ -1.8
SRRM4A7MD48 AP001207.1-201ENST00000524051 481 ntBASIC3.79□□□□□ -1.8
SRRM4A7MD48 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC3.79□□□□□ -1.8
SRRM4A7MD48 DEFB130C-202ENST00000530001 230 ntBASIC3.79□□□□□ -1.8
SRRM4A7MD48 AC021006.3-201ENST00000530771 192 ntBASIC3.79□□□□□ -1.8
SRRM4A7MD48 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC3.79□□□□□ -1.8
SRRM4A7MD48 OR5AN2P-201ENST00000534535 896 ntBASIC3.79□□□□□ -1.8
SRRM4A7MD48 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.79□□□□□ -1.8
SRRM4A7MD48 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC3.79□□□□□ -1.8
SRRM4A7MD48 AGGF1P6-201ENST00000569213 976 ntBASIC3.79□□□□□ -1.8
SRRM4A7MD48 RN7SL753P-201ENST00000581238 290 ntBASIC3.79□□□□□ -1.8
SRRM4A7MD48 AC209154.1-201ENST00000582156 337 ntBASIC3.79□□□□□ -1.8
SRRM4A7MD48 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.79□□□□□ -1.8
SRRM4A7MD48 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.79□□□□□ -1.8
SRRM4A7MD48 AC104763.3-201ENST00000613765 618 ntBASIC3.79□□□□□ -1.8
SRRM4A7MD48 AC099654.8-201ENST00000637757 681 ntBASIC3.79□□□□□ -1.8
SRRM4A7MD48 AC009452.1-201ENST00000640823 606 ntBASIC3.79□□□□□ -1.8
SRRM4A7MD48 AL596275.2-204ENST00000641628 552 ntBASIC3.79□□□□□ -1.8
SRRM4A7MD48 AL596275.2-206ENST00000641957 626 ntBASIC3.79□□□□□ -1.8
SRRM4A7MD48 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SRRM4A7MD48 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
SRRM4A7MD48 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SRRM4A7MD48 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC3.79□□□□□ -1.8
SRRM4A7MD48 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SRRM4A7MD48 RARSP1-201ENST00000542842 1418 ntBASIC3.78□□□□□ -1.8
SRRM4A7MD48 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SRRM4A7MD48 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
SRRM4A7MD48 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
SRRM4A7MD48 AC107081.3-201ENST00000612715 2034 ntBASIC3.78□□□□□ -1.8
SRRM4A7MD48 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SRRM4A7MD48 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC3.78□□□□□ -1.8
SRRM4A7MD48 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SRRM4A7MD48 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC3.78□□□□□ -1.8
SRRM4A7MD48 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC3.78□□□□□ -1.8
SRRM4A7MD48 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SRRM4A7MD48 AL136164.3-201ENST00000624429 3978 ntBASIC3.78□□□□□ -1.8
SRRM4A7MD48 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SRRM4A7MD48 AL442639.1-201ENST00000625030 1899 ntBASIC3.78□□□□□ -1.8
SRRM4A7MD48 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SRRM4A7MD48 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
SRRM4A7MD48 RNA5SP191-201ENST00000362585 102 ntBASIC3.78□□□□□ -1.8
SRRM4A7MD48 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
SRRM4A7MD48 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SRRM4A7MD48 SNORA51.8-201ENST00000384234 132 ntBASIC3.78□□□□□ -1.8
SRRM4A7MD48 SNORD96B-201ENST00000386148 79 ntBASIC3.78□□□□□ -1.8
SRRM4A7MD48 Y_RNA.578-201ENST00000390903 88 ntBASIC3.78□□□□□ -1.8
SRRM4A7MD48 FABP12P1-201ENST00000401911 322 ntBASIC3.78□□□□□ -1.8
SRRM4A7MD48 RSL24D1P1-201ENST00000404972 493 ntBASIC3.78□□□□□ -1.8
SRRM4A7MD48 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
SRRM4A7MD48 SPTLC1P2-201ENST00000407089 121 ntBASIC3.78□□□□□ -1.8
SRRM4A7MD48 BTF3P8-201ENST00000414577 526 ntBASIC3.78□□□□□ -1.8
SRRM4A7MD48 NUP35P2-201ENST00000416748 943 ntBASIC3.78□□□□□ -1.8
SRRM4A7MD48 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC3.78□□□□□ -1.8
SRRM4A7MD48 UBE2V1P1-201ENST00000430836 445 ntBASIC3.78□□□□□ -1.8
SRRM4A7MD48 AL513175.1-201ENST00000431492 780 ntBASIC3.78□□□□□ -1.8
SRRM4A7MD48 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.78□□□□□ -1.8
SRRM4A7MD48 PPIAP17-201ENST00000438507 471 ntBASIC3.78□□□□□ -1.8
SRRM4A7MD48 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC3.78□□□□□ -1.8
SRRM4A7MD48 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.78□□□□□ -1.8
SRRM4A7MD48 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC3.78□□□□□ -1.8
SRRM4A7MD48 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC3.78□□□□□ -1.8
SRRM4A7MD48 RPS20P21-201ENST00000466859 343 ntBASIC3.78□□□□□ -1.8
SRRM4A7MD48 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC3.78□□□□□ -1.8
SRRM4A7MD48 RN7SL214P-201ENST00000487317 265 ntBASIC3.78□□□□□ -1.8
SRRM4A7MD48 DEFB109F-201ENST00000491870 277 ntBASIC3.78□□□□□ -1.8
SRRM4A7MD48 RPS4XP18-201ENST00000495480 763 ntBASIC3.78□□□□□ -1.8
SRRM4A7MD48 MTATP6P22-201ENST00000507369 598 ntBASIC3.78□□□□□ -1.8
SRRM4A7MD48 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC3.78□□□□□ -1.8
SRRM4A7MD48 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms