Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RGPD3A6NKT7 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
RGPD3A6NKT7 AL672167.1-205ENST00000641112 3080 ntBASIC4.85□□□□□ -1.63
RGPD3A6NKT7 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
RGPD3A6NKT7 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
RGPD3A6NKT7 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
RGPD3A6NKT7 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.84□□□□□ -1.63
RGPD3A6NKT7 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RGPD3A6NKT7 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.84□□□□□ -1.63
RGPD3A6NKT7 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
RGPD3A6NKT7 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
RGPD3A6NKT7 RPL7P60-201ENST00000397636 735 ntBASIC4.84□□□□□ -1.63
RGPD3A6NKT7 SKP1P3-201ENST00000429280 487 ntBASIC4.84□□□□□ -1.63
RGPD3A6NKT7 AL831737.1-201ENST00000441288 271 ntBASIC4.84□□□□□ -1.63
RGPD3A6NKT7 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC4.84□□□□□ -1.63
RGPD3A6NKT7 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.84□□□□□ -1.63
RGPD3A6NKT7 RNU2-27P-201ENST00000516185 142 ntBASIC4.84□□□□□ -1.63
RGPD3A6NKT7 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.84□□□□□ -1.63
RGPD3A6NKT7 AC022695.1-201ENST00000522089 237 ntBASIC4.84□□□□□ -1.63
RGPD3A6NKT7 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.84□□□□□ -1.63
RGPD3A6NKT7 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC4.84□□□□□ -1.63
RGPD3A6NKT7 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC4.84□□□□□ -1.63
RGPD3A6NKT7 AC107993.1-201ENST00000591343 684 ntBASIC4.84□□□□□ -1.63
RGPD3A6NKT7 CDY3P-201ENST00000454543 1618 ntBASIC4.84□□□□□ -1.63
RGPD3A6NKT7 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RGPD3A6NKT7 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RGPD3A6NKT7 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RGPD3A6NKT7 AC139426.3-201ENST00000605648 2059 ntBASIC4.84□□□□□ -1.64
RGPD3A6NKT7 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.64
RGPD3A6NKT7 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
RGPD3A6NKT7 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
RGPD3A6NKT7 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC4.84□□□□□ -1.64
RGPD3A6NKT7 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.84□□□□□ -1.64
RGPD3A6NKT7 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.64
RGPD3A6NKT7 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.84□□□□□ -1.64
RGPD3A6NKT7 DYNLL1P7-201ENST00000429273 258 ntBASIC4.83□□□□□ -1.64
RGPD3A6NKT7 AC025518.1-201ENST00000479856 347 ntBASIC4.83□□□□□ -1.64
RGPD3A6NKT7 AC006517.1-201ENST00000480485 328 ntBASIC4.83□□□□□ -1.64
RGPD3A6NKT7 AC026782.2-201ENST00000510845 636 ntBASIC4.83□□□□□ -1.64
RGPD3A6NKT7 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC4.83□□□□□ -1.64
RGPD3A6NKT7 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC4.83□□□□□ -1.64
RGPD3A6NKT7 AC100770.1-201ENST00000532310 322 ntBASIC4.83□□□□□ -1.64
RGPD3A6NKT7 AC069240.1-201ENST00000548774 375 ntBASIC4.83□□□□□ -1.64
RGPD3A6NKT7 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC4.83□□□□□ -1.64
RGPD3A6NKT7 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.83□□□□□ -1.64
RGPD3A6NKT7 OR51C1P-201ENST00000608504 942 ntBASIC4.83□□□□□ -1.64
RGPD3A6NKT7 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RGPD3A6NKT7 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
RGPD3A6NKT7 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RGPD3A6NKT7 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
RGPD3A6NKT7 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.83□□□□□ -1.64
RGPD3A6NKT7 TCP1P3-201ENST00000414406 1498 ntBASIC4.83□□□□□ -1.64
RGPD3A6NKT7 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RGPD3A6NKT7 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
RGPD3A6NKT7 AL353743.1-202ENST00000431724 1695 ntBASIC4.83□□□□□ -1.64
RGPD3A6NKT7 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.83□□□□□ -1.64
RGPD3A6NKT7 RPL23AP89-201ENST00000439324 255 ntBASIC4.83□□□□□ -1.64
RGPD3A6NKT7 RANP8-201ENST00000444720 713 ntBASIC4.83□□□□□ -1.64
RGPD3A6NKT7 ARL4AP1-201ENST00000503220 705 ntBASIC4.83□□□□□ -1.64
RGPD3A6NKT7 BTG4P1-201ENST00000510421 183 ntBASIC4.83□□□□□ -1.64
RGPD3A6NKT7 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.83□□□□□ -1.64
RGPD3A6NKT7 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC4.83□□□□□ -1.64
RGPD3A6NKT7 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.83□□□□□ -1.64
RGPD3A6NKT7 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.83□□□□□ -1.64
RGPD3A6NKT7 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.83□□□□□ -1.64
RGPD3A6NKT7 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.83□□□□□ -1.64
RGPD3A6NKT7 MIR5004-201ENST00000579078 107 ntBASIC4.83□□□□□ -1.64
RGPD3A6NKT7 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.83□□□□□ -1.64
RGPD3A6NKT7 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.83□□□□□ -1.64
RGPD3A6NKT7 AC079684.1-201ENST00000621405 437 ntBASIC4.83□□□□□ -1.64
RGPD3A6NKT7 AC006484.1-201ENST00000435086 1884 ntBASIC4.83□□□□□ -1.64
RGPD3A6NKT7 AL365440.1-201ENST00000436135 2167 ntBASIC4.83□□□□□ -1.64
RGPD3A6NKT7 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
RGPD3A6NKT7 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RGPD3A6NKT7 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
RGPD3A6NKT7 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.82□□□□□ -1.64
RGPD3A6NKT7 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.82□□□□□ -1.64
RGPD3A6NKT7 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RGPD3A6NKT7 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
RGPD3A6NKT7 RPL7P44-201ENST00000424827 742 ntBASIC4.82□□□□□ -1.64
RGPD3A6NKT7 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC4.82□□□□□ -1.64
RGPD3A6NKT7 RPL7P23-201ENST00000493874 747 ntBASIC4.82□□□□□ -1.64
RGPD3A6NKT7 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4.82□□□□□ -1.64
RGPD3A6NKT7 STMN1P2-201ENST00000508435 439 ntBASIC4.82□□□□□ -1.64
RGPD3A6NKT7 PHBP14-201ENST00000512887 367 ntBASIC4.82□□□□□ -1.64
RGPD3A6NKT7 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC4.82□□□□□ -1.64
RGPD3A6NKT7 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.82□□□□□ -1.64
RGPD3A6NKT7 RPL21P7-201ENST00000557463 483 ntBASIC4.82□□□□□ -1.64
RGPD3A6NKT7 AC016839.1-201ENST00000578162 867 ntBASIC4.82□□□□□ -1.64
RGPD3A6NKT7 AC006077.1-201ENST00000604746 343 ntBASIC4.82□□□□□ -1.64
RGPD3A6NKT7 AC110801.1-201ENST00000623590 212 ntBASIC4.82□□□□□ -1.64
RGPD3A6NKT7 AC138907.10-201ENST00000623708 983 ntBASIC4.82□□□□□ -1.64
RGPD3A6NKT7 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.82□□□□□ -1.64
RGPD3A6NKT7 ATE1-AS1-202ENST00000636460 506 ntBASIC4.82□□□□□ -1.64
RGPD3A6NKT7 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
RGPD3A6NKT7 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RGPD3A6NKT7 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
RGPD3A6NKT7 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
RGPD3A6NKT7 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
RGPD3A6NKT7 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms